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The map label for this gene is 13475295

Identifier: 13475295

GI number: 13475295

Start: 5150496

End: 5151056

Strand: Direct

Name: 13475295

Synonym: mlr8762

Alternate gene names: NA

Gene position: 5150496-5151056 (Clockwise)

Preceding gene: 13475294

Following gene: 13475298

Centisome position: 73.2

GC content: 57.75

Gene sequence:

>561_bases
ATGACTTTGCGGATCAAAGTTCTCCTGGTCGCCCTGACAGCCAGCGCAAGTGGCTGCACAAGCACTGTGCCGATCTATGT
CGAGCCCCCTGCGCCAATCCTTATCCGGCCGGAGACCACCGTGCTGATATTAAAGAGCCTCCGCGCTTCCGAACGGCAGC
GTTTGCGTGTTTTCCTTGACAGGACCAGTAGCGGCCGCCGCGATGCCCTTCACCTCCTTATCTGGGGCTCGTCCCGGCTC
AGCGCAGAGGTGGTGCATCAGGCCAGGCAGATGGGTATAGACACTTACAACATCCATTTGCTCGACCAACACGATGGCGG
CGCAGTCCAAGTAGAAGCAATTGTGTATCATGCCCGCCCACCTGCCTGTCCGTCGTATTCTTTACTCAGTGACAAATCCT
TCGAAAAGCCCCTTGGCTGTTCGACACGACGTAACCTAGCTGCAATGGTCAACGATCCGCGCGATTTGCTCGACAACCAG
GCTGTCGAGCCGAGCGATGGCGAGCGTGCGGCCATACCAGTTGCCACATACAGGACGTTCGGGGCGGGCAAAGGTCAATG
A

Upstream 100 bases:

>100_bases
ACGATCCGCCGGCAGATCCGCCGCGAGGCCGCGCTGCTGCCCGCACCGGCGCGCCCGGGGCCAAGCGCGGTCGCGGCTTC
ATAATTCAATAGGTGATCGA

Downstream 100 bases:

>100_bases
CATGGGTCGTATGTTTTAGCTTGGTAGAGCACGGCGCCGCCTCCAGTCTGTAACATTGCCGTTGCTTCGGATCTGGTGGT
GAGCGCGGCCGTCACAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTLRIKVLLVALTASASGCTSTVPIYVEPPAPILIRPETTVLILKSLRASERQRLRVFLDRTSSGRRDALHLLIWGSSRL
SAEVVHQARQMGIDTYNIHLLDQHDGGAVQVEAIVYHARPPACPSYSLLSDKSFEKPLGCSTRRNLAAMVNDPRDLLDNQ
AVEPSDGERAAIPVATYRTFGAGKGQ

Sequences:

>Translated_186_residues
MTLRIKVLLVALTASASGCTSTVPIYVEPPAPILIRPETTVLILKSLRASERQRLRVFLDRTSSGRRDALHLLIWGSSRL
SAEVVHQARQMGIDTYNIHLLDQHDGGAVQVEAIVYHARPPACPSYSLLSDKSFEKPLGCSTRRNLAAMVNDPRDLLDNQ
AVEPSDGERAAIPVATYRTFGAGKGQ
>Mature_185_residues
TLRIKVLLVALTASASGCTSTVPIYVEPPAPILIRPETTVLILKSLRASERQRLRVFLDRTSSGRRDALHLLIWGSSRLS
AEVVHQARQMGIDTYNIHLLDQHDGGAVQVEAIVYHARPPACPSYSLLSDKSFEKPLGCSTRRNLAAMVNDPRDLLDNQA
VEPSDGERAAIPVATYRTFGAGKGQ

Specific function: Unknown

COG id: COG5461

COG function: function code N; Type IV pili component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019027
- InterPro:   IPR013361 [H]

Pfam domain/function: PF09476 Pilus_CpaD [H]

EC number: NA

Molecular weight: Translated: 20342; Mature: 20210

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRIKVLLVALTASASGCTSTVPIYVEPPAPILIRPETTVLILKSLRASERQRLRVFLD
CEEEEEEEEEEEECCCCCCCCCCEEEECCCCCEEECCCCCEEEEEHHCCCHHHHEEEEEE
RTSSGRRDALHLLIWGSSRLSAEVVHQARQMGIDTYNIHLLDQHDGGAVQVEAIVYHARP
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEEECCC
PACPSYSLLSDKSFEKPLGCSTRRNLAAMVNDPRDLLDNQAVEPSDGERAAIPVATYRTF
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCCEEEEEEEHEEEC
GAGKGQ
CCCCCC
>Mature Secondary Structure 
TLRIKVLLVALTASASGCTSTVPIYVEPPAPILIRPETTVLILKSLRASERQRLRVFLD
EEEEEEEEEEEECCCCCCCCCCEEEECCCCCEEECCCCCEEEEEHHCCCHHHHEEEEEE
RTSSGRRDALHLLIWGSSRLSAEVVHQARQMGIDTYNIHLLDQHDGGAVQVEAIVYHARP
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEEECCC
PACPSYSLLSDKSFEKPLGCSTRRNLAAMVNDPRDLLDNQAVEPSDGERAAIPVATYRTF
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCCEEEEEEEHEEEC
GAGKGQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]