| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475089
Identifier: 13475089
GI number: 13475089
Start: 4931438
End: 4932688
Strand: Direct
Name: 13475089
Synonym: mlr6095
Alternate gene names: NA
Gene position: 4931438-4932688 (Clockwise)
Preceding gene: 13475088
Following gene: 13475090
Centisome position: 70.09
GC content: 54.76
Gene sequence:
>1251_bases GTGCAGATCAAAGATGTACTCCTCGCGCCAGGAAGCGGCGCGTTTTTCTACGACGATCAGGCAGCCATAAGAGCAGGTGC CACGCAGGACGGTTTTGTCTATGTGGGCCAACCCGCGACGCCAGCCTTCCAATCCATTCGCGTTCCGGCAAATTCGCTAA GTATCGGGCTTGTCCTTGTCGATGACACCGTCGTTTGGGGCGATATGATGAGCGTTCAGTATTCTGGTGCCGGTGGGCGC GATGCGTTGTTTGAAACTTCTCAAATCTCGGATTTGACATCGCGGGTCGTGATGCCTCGGCTTATCGATGTCGATGTGTC TCGCTACCTCGATGCCTGCGCGAAGGTTTTCGAGCCCATCGGACACAAGCGGTTACCTCTCGCGATTGAGTATGGCGTCA GCCAGGCGCTCCTTCGCGCAGCAGCCCACCTTCAACGTACGACAATGGCAGAGATTGTATGCAGTGAATTTGACCTACCG CTGCCAACGCACAGGGTGCCGATCTACTGCCAGAGTGGTGATGCTCGGGAACTTAACGTCGACAAGATGATTTTGAAAGC CGTGGATGTGCTTCCGCACGGTCTGATCAATTCACGGCAGAAATTCGGTGTCGACGGCCAGACCTTCATGGAGTTTGTGA AGTGGGTTGTGACGCGTACGCGTCAAATCGGCAGTCCAGGATATCATCCGGTGCTGCATTTCGACGTGTATGGGTGGATC GGCGAGGAAATCGGCCTAGAGCCGCAACGGATCGCCGACTTTATCTGCAGGGTTGCAGATAGCGTCCCGGATTTCACGCT CAACATCGAGTCCCCGGCGGATTTTGGTTCGACGCAAGCTCAAATTGAGAACTACGCCAAGATCGTATCGATTTTAGACA ACCGGGGTTCCAGCGCGCGCATTGTCGTGGATGAGAGATGCAATACGTTTGAGGATATCCGGCTCTTTGCCGAAGCGAAG GCCACGCATCTCGTTCAGATCAAGACCCCCGATGTCGGCTCAATTGCCGATACAGCGCGGGCAGTTCTTCTCTGCAAAAC GAATAAGGTAGGCGCATATGTCGGGGGAAGCTGTACCGAGACAGATCTCTCCGCCCAAGCTTCCGTCCACGTATCCGTGG CAACCCAGGCCGACATGATGCTTGCAAAGCCTGGAATGGGTGTCGACGAGGCATTCTCAATTGTTGGGAACGAACAGAAC CGCTTGCTGGCGATGCTGAACCGTCGTCGGACCCAAAACGAAAAAATTTGA
Upstream 100 bases:
>100_bases ATATTGGCGGACCCAATGCCAACTGGCACATACTTCGTAGGTAACGGAACCAACCGCATCCGCCCGTCAACACCGTCCGG CAGAAATCGAGTGAACTGAA
Downstream 100 bases:
>100_bases TGACAAGCACGGTGTTGTATGCAGAACTCTCTTGAGGGGATCACTGTCGTAGCCGTGGAGCAGGCGGTGGCCGCGCCTTA CGCATCGTCGCGCCTTGCGG
Product: 3-methylaspartate ammonia-lyase
Products: NA
Alternate protein names: Beta-methylaspartase [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MQIKDVLLAPGSGAFFYDDQAAIRAGATQDGFVYVGQPATPAFQSIRVPANSLSIGLVLVDDTVVWGDMMSVQYSGAGGR DALFETSQISDLTSRVVMPRLIDVDVSRYLDACAKVFEPIGHKRLPLAIEYGVSQALLRAAAHLQRTTMAEIVCSEFDLP LPTHRVPIYCQSGDARELNVDKMILKAVDVLPHGLINSRQKFGVDGQTFMEFVKWVVTRTRQIGSPGYHPVLHFDVYGWI GEEIGLEPQRIADFICRVADSVPDFTLNIESPADFGSTQAQIENYAKIVSILDNRGSSARIVVDERCNTFEDIRLFAEAK ATHLVQIKTPDVGSIADTARAVLLCKTNKVGAYVGGSCTETDLSAQASVHVSVATQADMMLAKPGMGVDEAFSIVGNEQN RLLAMLNRRRTQNEKI
Sequences:
>Translated_416_residues MQIKDVLLAPGSGAFFYDDQAAIRAGATQDGFVYVGQPATPAFQSIRVPANSLSIGLVLVDDTVVWGDMMSVQYSGAGGR DALFETSQISDLTSRVVMPRLIDVDVSRYLDACAKVFEPIGHKRLPLAIEYGVSQALLRAAAHLQRTTMAEIVCSEFDLP LPTHRVPIYCQSGDARELNVDKMILKAVDVLPHGLINSRQKFGVDGQTFMEFVKWVVTRTRQIGSPGYHPVLHFDVYGWI GEEIGLEPQRIADFICRVADSVPDFTLNIESPADFGSTQAQIENYAKIVSILDNRGSSARIVVDERCNTFEDIRLFAEAK ATHLVQIKTPDVGSIADTARAVLLCKTNKVGAYVGGSCTETDLSAQASVHVSVATQADMMLAKPGMGVDEAFSIVGNEQN RLLAMLNRRRTQNEKI >Mature_416_residues MQIKDVLLAPGSGAFFYDDQAAIRAGATQDGFVYVGQPATPAFQSIRVPANSLSIGLVLVDDTVVWGDMMSVQYSGAGGR DALFETSQISDLTSRVVMPRLIDVDVSRYLDACAKVFEPIGHKRLPLAIEYGVSQALLRAAAHLQRTTMAEIVCSEFDLP LPTHRVPIYCQSGDARELNVDKMILKAVDVLPHGLINSRQKFGVDGQTFMEFVKWVVTRTRQIGSPGYHPVLHFDVYGWI GEEIGLEPQRIADFICRVADSVPDFTLNIESPADFGSTQAQIENYAKIVSILDNRGSSARIVVDERCNTFEDIRLFAEAK ATHLVQIKTPDVGSIADTARAVLLCKTNKVGAYVGGSCTETDLSAQASVHVSVATQADMMLAKPGMGVDEAFSIVGNEQN RLLAMLNRRRTQNEKI
Specific function: Unknown
COG id: COG3799
COG function: function code E; Methylaspartate ammonia-lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006395 - InterPro: IPR022662 - InterPro: IPR022665 [H]
Pfam domain/function: PF07476 MAAL_C; PF05034 MAAL_N [H]
EC number: =4.3.1.2 [H]
Molecular weight: Translated: 45441; Mature: 45441
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKDVLLAPGSGAFFYDDQAAIRAGATQDGFVYVGQPATPAFQSIRVPANSLSIGLVLV CCCCCEEEECCCCCEEECCHHHHHCCCCCCCEEEECCCCCCCHHHEECCCCCEEEEEEEE DDTVVWGDMMSVQYSGAGGRDALFETSQISDLTSRVVMPRLIDVDVSRYLDACAKVFEPI ECEEEECCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GHKRLPLAIEYGVSQALLRAAAHLQRTTMAEIVCSEFDLPLPTHRVPIYCQSGDARELNV CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCH DKMILKAVDVLPHGLINSRQKFGVDGQTFMEFVKWVVTRTRQIGSPGYHPVLHFDVYGWI HHHHHHHHHHHCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHH GEEIGLEPQRIADFICRVADSVPDFTLNIESPADFGSTQAQIENYAKIVSILDNRGSSAR HHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE IVVDERCNTFEDIRLFAEAKATHLVQIKTPDVGSIADTARAVLLCKTNKVGAYVGGSCTE EEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHEEEEEEECCCCCEEECCCCCC TDLSAQASVHVSVATQADMMLAKPGMGVDEAFSIVGNEQNRLLAMLNRRRTQNEKI CCCCCCEEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQIKDVLLAPGSGAFFYDDQAAIRAGATQDGFVYVGQPATPAFQSIRVPANSLSIGLVLV CCCCCEEEECCCCCEEECCHHHHHCCCCCCCEEEECCCCCCCHHHEECCCCCEEEEEEEE DDTVVWGDMMSVQYSGAGGRDALFETSQISDLTSRVVMPRLIDVDVSRYLDACAKVFEPI ECEEEECCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GHKRLPLAIEYGVSQALLRAAAHLQRTTMAEIVCSEFDLPLPTHRVPIYCQSGDARELNV CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCH DKMILKAVDVLPHGLINSRQKFGVDGQTFMEFVKWVVTRTRQIGSPGYHPVLHFDVYGWI HHHHHHHHHHHCCHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHH GEEIGLEPQRIADFICRVADSVPDFTLNIESPADFGSTQAQIENYAKIVSILDNRGSSAR HHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE IVVDERCNTFEDIRLFAEAKATHLVQIKTPDVGSIADTARAVLLCKTNKVGAYVGGSCTE EEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHEEEEEEECCCCCEEECCCCCC TDLSAQASVHVSVATQADMMLAKPGMGVDEAFSIVGNEQNRLLAMLNRRRTQNEKI CCCCCCEEEEEEEECCCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1420191; 8454064; 8428631; 1397267 [H]