Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475088

Identifier: 13475088

GI number: 13475088

Start: 4930963

End: 4931202

Strand: Direct

Name: 13475088

Synonym: msr6094

Alternate gene names: NA

Gene position: 4930963-4931202 (Clockwise)

Preceding gene: 13475087

Following gene: 13475089

Centisome position: 70.08

GC content: 56.67

Gene sequence:

>240_bases
ATGCGCGACGTGATACCGCAGGACATCTCCCAAAGCTTTTCCGACACGTATTCCATCGCGCGCCAGAAGTTCCTCGACCT
AGCCAAGTCTGTGAAATCATATAAATCGCCAGCCGGGGGACCGGCTGGCGAGGAATTGTTCACCGATGTCGCTTGGTTCG
GCAATCCAGACGCTTATCATGTGGGCGTATTGATCTCGGCTACGCACGGCGTAGAGGGCTACTGCGGCTCGGCAGGTTGA

Upstream 100 bases:

>100_bases
AAAAACACTGGCATTGCGATCACCCAGTCGTTCGTCGTCACTGAGGACGGCTACGAGCCACTCACCAAAAGCCCCGCGAG
TTGATCGTTAAGGACTGACA

Downstream 100 bases:

>100_bases
CCTACGGTTAGACGTATGAGGACCGGATCAGCGAGCGAAGCAGACATATTGTAGTTGCAAAAACAAGAGAGGCGACGGCG
GTCCTAAAAATAGGCACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MRDVIPQDISQSFSDTYSIARQKFLDLAKSVKSYKSPAGGPAGEELFTDVAWFGNPDAYHVGVLISATHGVEGYCGSAG

Sequences:

>Translated_79_residues
MRDVIPQDISQSFSDTYSIARQKFLDLAKSVKSYKSPAGGPAGEELFTDVAWFGNPDAYHVGVLISATHGVEGYCGSAG
>Mature_79_residues
MRDVIPQDISQSFSDTYSIARQKFLDLAKSVKSYKSPAGGPAGEELFTDVAWFGNPDAYHVGVLISATHGVEGYCGSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8413; Mature: 8413

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDVIPQDISQSFSDTYSIARQKFLDLAKSVKSYKSPAGGPAGEELFTDVAWFGNPDAYH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
VGVLISATHGVEGYCGSAG
EEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRDVIPQDISQSFSDTYSIARQKFLDLAKSVKSYKSPAGGPAGEELFTDVAWFGNPDAYH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
VGVLISATHGVEGYCGSAG
EEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA