| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475087
Identifier: 13475087
GI number: 13475087
Start: 4929758
End: 4930753
Strand: Direct
Name: 13475087
Synonym: mlr6093
Alternate gene names: NA
Gene position: 4929758-4930753 (Clockwise)
Preceding gene: 13475081
Following gene: 13475088
Centisome position: 70.06
GC content: 54.62
Gene sequence:
>996_bases ATGAGCGAAGCACCACATCTTACGTTTGATCTCGACACCCCTGGCGTAAGCACGGGGCACCTTGTTGTTCCCAAAGGCGC GGACTGCGAAGCTCTCTCGCTCCCGGTCTTCAGCTGCAATAGAGGTGAAGGACCGAGCCTACTTATCACTGGCGGAAACC ACGGCAATGAACTGCAGGGGCCGATTCTTGCTCGGCGACTTGTTAAATGGCTTCCTGAAGCGCAGAGGTGCGGAAGGATT ATTATCGTACCAGAGATCAATCCGCTTGCCGTGCAAGCTTGGACCCGCAATACGCCAATCGATGGAAAGAATCTCAACCG AGTGTTTCCGGGCCGGTCGGATGGCTCGGTAAGCGAACGGATCGCAGATGCGATTTCGCGTCTATTGTTGCCTGTGGTGG ACACCGTACTCGATCTGCACAGTTTTGGGCCGACTTGGGATTGTGCACCGTCGATCATCTCACACCCTATTGCCGATATC GATCAGATGACGAAGACGGTCAGCATTTCGAAGGCATTCAAGTTGCCGGTGACGTTGCTCTGGGAGCACAACGAAACGGA TGGAATGTTCGATACTTTGGTGCATAGACAAGGCAAGACATTCATTTGCACTGAATTTGGCGGCGGCGTAGTCAGCGCCG AAGCACTCACTATCTACGAAGCCGGGGTGCGCAATGGCCTCATTGCGCTTGGCTTGGTCAAGGGCAAGGCCGAGTATCCA ACCTTCCGTCAGCAGAAGACCGGCCAAACACTGGAAACAACTTCCTCCGACCAGCTGAAATCGCCCTCACCGGGCATCTT CGAACCGCGCTGCTCGGTGATGGATGAAGTAGAGCAGGGAGATGTGGTAGGCGTCCTACATCCGATGGGTTCGCTGTCCG CTGCTTCCATCGATATTCGCGCGCAATCGAAATCTACCGTGTTTGCCATCCGATCAGCAATGTATGTCCAAGGCAACGAA GAAGTGGCGATACTCGCACGACCCTTAGCTCGTTGA
Upstream 100 bases:
>100_bases GGAACATTATATTGGCGCACTAAAGACAGTTGGGCGCATATTCAAAAAACGGAAAAACGCATACCGGCGCCTGGTCGCCT GAGTACAAGAGGGATGAACA
Downstream 100 bases:
>100_bases GGTCGGATGTTCGTCGTCAACCACCCGGGAGATTAAAACGGAACATGCCCGGCGGTGTTAGGCGCAGCCGACCGGGGTGG CCTTCCAGCTGATGGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinylglutamatedesuccinylase/Aspartoacylase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinate Dehydrogenase Subunit
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSEAPHLTFDLDTPGVSTGHLVVPKGADCEALSLPVFSCNRGEGPSLLITGGNHGNELQGPILARRLVKWLPEAQRCGRI IIVPEINPLAVQAWTRNTPIDGKNLNRVFPGRSDGSVSERIADAISRLLLPVVDTVLDLHSFGPTWDCAPSIISHPIADI DQMTKTVSISKAFKLPVTLLWEHNETDGMFDTLVHRQGKTFICTEFGGGVVSAEALTIYEAGVRNGLIALGLVKGKAEYP TFRQQKTGQTLETTSSDQLKSPSPGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAIRSAMYVQGNE EVAILARPLAR
Sequences:
>Translated_331_residues MSEAPHLTFDLDTPGVSTGHLVVPKGADCEALSLPVFSCNRGEGPSLLITGGNHGNELQGPILARRLVKWLPEAQRCGRI IIVPEINPLAVQAWTRNTPIDGKNLNRVFPGRSDGSVSERIADAISRLLLPVVDTVLDLHSFGPTWDCAPSIISHPIADI DQMTKTVSISKAFKLPVTLLWEHNETDGMFDTLVHRQGKTFICTEFGGGVVSAEALTIYEAGVRNGLIALGLVKGKAEYP TFRQQKTGQTLETTSSDQLKSPSPGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAIRSAMYVQGNE EVAILARPLAR >Mature_330_residues SEAPHLTFDLDTPGVSTGHLVVPKGADCEALSLPVFSCNRGEGPSLLITGGNHGNELQGPILARRLVKWLPEAQRCGRII IVPEINPLAVQAWTRNTPIDGKNLNRVFPGRSDGSVSERIADAISRLLLPVVDTVLDLHSFGPTWDCAPSIISHPIADID QMTKTVSISKAFKLPVTLLWEHNETDGMFDTLVHRQGKTFICTEFGGGVVSAEALTIYEAGVRNGLIALGLVKGKAEYPT FRQQKTGQTLETTSSDQLKSPSPGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVFAIRSAMYVQGNEE VAILARPLAR
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35656; Mature: 35525
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAPHLTFDLDTPGVSTGHLVVPKGADCEALSLPVFSCNRGEGPSLLITGGNHGNELQG CCCCCCEEEECCCCCCCCCCEEECCCCCCCEEECCEEECCCCCCCEEEEECCCCCCCCCH PILARRLVKWLPEAQRCGRIIIVPEINPLAVQAWTRNTPIDGKNLNRVFPGRSDGSVSER HHHHHHHHHHCCCHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHH IADAISRLLLPVVDTVLDLHSFGPTWDCAPSIISHPIADIDQMTKTVSISKAFKLPVTLL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEE WEHNETDGMFDTLVHRQGKTFICTEFGGGVVSAEALTIYEAGVRNGLIALGLVKGKAEYP EECCCCCCHHHHHHHHCCCEEEEEECCCCEEEEHEEEEEHHCCCCCEEEEEEEECCCCCC TFRQQKTGQTLETTSSDQLKSPSPGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIR CHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCEEEEEEE AQSKSTVFAIRSAMYVQGNEEVAILARPLAR ECCCCEEEEEEEEEEEECCCCEEEEECCCCC >Mature Secondary Structure SEAPHLTFDLDTPGVSTGHLVVPKGADCEALSLPVFSCNRGEGPSLLITGGNHGNELQG CCCCCEEEECCCCCCCCCCEEECCCCCCCEEECCEEECCCCCCCEEEEECCCCCCCCCH PILARRLVKWLPEAQRCGRIIIVPEINPLAVQAWTRNTPIDGKNLNRVFPGRSDGSVSER HHHHHHHHHHCCCHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHH IADAISRLLLPVVDTVLDLHSFGPTWDCAPSIISHPIADIDQMTKTVSISKAFKLPVTLL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEE WEHNETDGMFDTLVHRQGKTFICTEFGGGVVSAEALTIYEAGVRNGLIALGLVKGKAEYP EECCCCCCHHHHHHHHCCCEEEEEECCCCEEEEHEEEEEHHCCCCCEEEEEEEECCCCCC TFRQQKTGQTLETTSSDQLKSPSPGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIR CHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCEEEEEEE AQSKSTVFAIRSAMYVQGNEEVAILARPLAR ECCCCEEEEEEEEEEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA