| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is solI [H]
Identifier: 13474693
GI number: 13474693
Start: 4530243
End: 4530881
Strand: Direct
Name: solI [H]
Synonym: mlr5638
Alternate gene names: 13474693
Gene position: 4530243-4530881 (Clockwise)
Preceding gene: 13474692
Following gene: 13474694
Centisome position: 64.39
GC content: 60.88
Gene sequence:
>639_bases ATGCTTTTTTGTCTTACAACTCAAGAATTGATGGAACGTCCCGATCTTTGGGAAGCCGTCCATCGCCTGCGCTACCAGAT ATTTGTCGAAGAGATGGGGTGGGAGGACCTGCGGCGCCCGGACGGATTCGAGGTCGACCAGTTCGACCATGACGAGGCCG TGCATCAGATCGTCCTCAGAGGCAACGAAGTCGCGGGCTATCAACGGATGTTACCGACCACGCGGCCCCATTTGCTGACC GAGGTCTTGACCGACCTTTCCGAAGGAACGCCGCCATCGGGCCCCAACATCTGGGAATTGACCCGCTATGCGGTGGCTCC CGGTTTTCGCGATGGCCGTCGCGGCGTCTCGACCGTCGGCACCGAATTGATTGCCGGCTTCGTCGAGTGGGGGCTGAAGC GCGGCGTCGACAAGGTGATCATCGAGTTCGAGCCGATGTGGGTGTTGCGCGCCTTGCAGCTGCATTTCCTCGCGACGCCG CTGGGCTATCAGCGCACCTATGGCAATCAGCAGGTCGTGGCGACCCTGCTCTCTTTCAACGAGCACACGCTGGACGTGGT GCGTTCGCGCCGCAATCACCATGCTCCCGTCCTGGCGCGGGGATATCCCGACATGTTCGGCCAAAGGAGGGCGTCATGA
Upstream 100 bases:
>100_bases AGGTCGGCCGTGCCGACCTAGAATTTCTTGCCTACGTGATCACGCAATTTTCTCGTTGAGGCACGGCCGTATCTTCCTCT TAAACCCAGGAGACGACGGC
Downstream 100 bases:
>100_bases GGTTGGAGATGGCCATGAACCCGCACCCGCAACCGGAACTGCGCAACCACACGCTGATCGTCACCGTGTCGTCGAATGAC GGCCGGCCGGTGCTCGACAG
Product: autoinducer synthase
Products: NA
Alternate protein names: Autoinducer synthesis protein solI [H]
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLFCLTTQELMERPDLWEAVHRLRYQIFVEEMGWEDLRRPDGFEVDQFDHDEAVHQIVLRGNEVAGYQRMLPTTRPHLLT EVLTDLSEGTPPSGPNIWELTRYAVAPGFRDGRRGVSTVGTELIAGFVEWGLKRGVDKVIIEFEPMWVLRALQLHFLATP LGYQRTYGNQQVVATLLSFNEHTLDVVRSRRNHHAPVLARGYPDMFGQRRAS
Sequences:
>Translated_212_residues MLFCLTTQELMERPDLWEAVHRLRYQIFVEEMGWEDLRRPDGFEVDQFDHDEAVHQIVLRGNEVAGYQRMLPTTRPHLLT EVLTDLSEGTPPSGPNIWELTRYAVAPGFRDGRRGVSTVGTELIAGFVEWGLKRGVDKVIIEFEPMWVLRALQLHFLATP LGYQRTYGNQQVVATLLSFNEHTLDVVRSRRNHHAPVLARGYPDMFGQRRAS >Mature_212_residues MLFCLTTQELMERPDLWEAVHRLRYQIFVEEMGWEDLRRPDGFEVDQFDHDEAVHQIVLRGNEVAGYQRMLPTTRPHLLT EVLTDLSEGTPPSGPNIWELTRYAVAPGFRDGRRGVSTVGTELIAGFVEWGLKRGVDKVIIEFEPMWVLRALQLHFLATP LGYQRTYGNQQVVATLLSFNEHTLDVVRSRRNHHAPVLARGYPDMFGQRRAS
Specific function: Required for the synthesis of acyl-HSL autoinducers that bind to solR [H]
COG id: COG3916
COG function: function code TQ; N-acyl-L-homoserine lactone synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the autoinducer synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR001690 - InterPro: IPR018311 [H]
Pfam domain/function: PF00765 Autoind_synth [H]
EC number: =2.3.1.184 [H]
Molecular weight: Translated: 24441; Mature: 24441
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFCLTTQELMERPDLWEAVHRLRYQIFVEEMGWEDLRRPDGFEVDQFDHDEAVHQIVLR CEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHC GNEVAGYQRMLPTTRPHLLTEVLTDLSEGTPPSGPNIWELTRYAVAPGFRDGRRGVSTVG CCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH TELIAGFVEWGLKRGVDKVIIEFEPMWVLRALQLHFLATPLGYQRTYGNQQVVATLLSFN HHHHHHHHHHHHHHCHHHEEHCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCC EHTLDVVRSRRNHHAPVLARGYPDMFGQRRAS HHHHHHHHHHHCCCCCEEECCCHHHHHHCCCC >Mature Secondary Structure MLFCLTTQELMERPDLWEAVHRLRYQIFVEEMGWEDLRRPDGFEVDQFDHDEAVHQIVLR CEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHC GNEVAGYQRMLPTTRPHLLTEVLTDLSEGTPPSGPNIWELTRYAVAPGFRDGRRGVSTVG CCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH TELIAGFVEWGLKRGVDKVIIEFEPMWVLRALQLHFLATPLGYQRTYGNQQVVATLLSFN HHHHHHHHHHHHHHCHHHEEHCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCC EHTLDVVRSRRNHHAPVLARGYPDMFGQRRAS HHHHHHHHHHHCCCCCEEECCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371457 [H]