Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474133

Identifier: 13474133

GI number: 13474133

Start: 3923710

End: 3923964

Strand: Reverse

Name: 13474133

Synonym: msl4947

Alternate gene names: NA

Gene position: 3923964-3923710 (Counterclockwise)

Preceding gene: 13474134

Following gene: 13474132

Centisome position: 55.77

GC content: 64.71

Gene sequence:

>255_bases
ATGCTTGAGCTGCGCCCAAATTGCGAGTGTTGCGACAAGGACCTGCCGCCGGAGGCGACGGATGCGCTGATCTGCACCTT
CGAATGCACCTTCTGCGCCGATTGCGTGGAAAACGTGCTGGACGGCGTCTGTCCCAATTGCGGCGGCAATTTTTCGGCCC
GGCCGATCCGCCCGGCAGCGAAGCTGAACAAATACCCGGCGTCGACCAAGCGCGTCCTCAAGGCCGAGGGCTGCGGCCCG
CGCAAGGCCGCGTGA

Upstream 100 bases:

>100_bases
GGCATCGCCGAGATGATCCATGACGTGCAAGTGGAAGCGACCTTCCCCGACGGCACCAAGCTGGTGACCGTGCACGCGCC
CATCAGGTGAGGAGACCGCG

Downstream 100 bases:

>100_bases
CTGCACCATCGCAAACGAAAGGCAAGTAGAATGATCCCTGCCAAACGCCTGTGCCTCGCGGCGATCCTGCTCATGGCTGC
GGCCATGCCGGCCTATGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAAKLNKYPASTKRVLKAEGCGP
RKAA

Sequences:

>Translated_84_residues
MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAAKLNKYPASTKRVLKAEGCGP
RKAA
>Mature_84_residues
MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAAKLNKYPASTKRVLKAEGCGP
RKAA

Specific function: Unknown

COG id: COG3813

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010696
- InterPro:   IPR013083 [H]

Pfam domain/function: PF06906 DUF1272 [H]

EC number: NA

Molecular weight: Translated: 9022; Mature: 9022

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
13.1 %Cys+Met (Translated Protein)
11.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
13.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAA
CCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
KLNKYPASTKRVLKAEGCGPRKAA
HHCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLELRPNCECCDKDLPPEATDALICTFECTFCADCVENVLDGVCPNCGGNFSARPIRPAA
CCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
KLNKYPASTKRVLKAEGCGPRKAA
HHCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8121412; 11481430 [H]