| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474055
Identifier: 13474055
GI number: 13474055
Start: 3849870
End: 3850580
Strand: Reverse
Name: 13474055
Synonym: mll4842
Alternate gene names: NA
Gene position: 3850580-3849870 (Counterclockwise)
Preceding gene: 13474059
Following gene: 13474053
Centisome position: 54.73
GC content: 62.03
Gene sequence:
>711_bases ATGACCCGGCGTGAATTGCGCGCGGTGCGGCTGCAGCTCGAACTGTTGAAGCCGGAAATGATCCTGGCCGAGCGCGGCAT CCGTTCGACGGTGATCCTGTTTGGCGGCGCGCGCCTGCCGGAACCCGGCGGCGTGGCCTGGGCGGCCAAGAACGAGACGC AGAAGAAGAACCTCGAGGAAAACAGCAAATATTACGAGGAGGCGCGTAAATTCGCTCGCCTGTGTTCGCAACAGTCGGCC GCCTCATATTACCGCGAATATGTCGTAGTGACCGGCGGCGGCCCCGGCGTGATGGAAGCGGGAAACCGCGGCGCCGACGA TGTCGGCGCGCCGTCGATCGGGCTCAACATCGTGCTGCCGCACGAGCAGGCGCCGAACGCCTATGTGACGCCGGAGCTGT GTTTCAACTTCCACTATTTCGCCATCCGCAAGATGCATTTCGTCATGCGCGCCAAGGCGGTGGCGGTGTTTCCCGGCGGC TTCGGCACGATGGACGAGTTCTTCGAGACACTGACCCTGATCCAAACCGGGCGCATGGAGCGCGTGCCGGTGATCCTGTT CGGCAAATCCTTCTGGAAACGGGCGATCAACCTCGACTTCCTCGCCGAGCAAGGCACGATCAGCCCCGGCGACCAGGACA TCATCGATTTCGTCGACACCGCCGACGAAGCCTGGGGCATTGTCAGCCGGTTCTACAAATTAGGGGAATAA
Upstream 100 bases:
>100_bases GCCGCATTCGGACGAGGATCTGGAGCGGTCGAAAAGCGTGCCGGACACGCCGCAGACGCGGGCCGAGACCTACCGGCTTG CCTGGAACGACCCCGACTTC
Downstream 100 bases:
>100_bases GGGCAGTAGGCAGTAGGCAGTAGGCAGTAGGAGAATAAGGCGTTTGCAGTCGCTGCTTCCAGATCAATTTCCCCCTACTG CCTACTGCCTATTCCCTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTRRELRAVRLQLELLKPEMILAERGIRSTVILFGGARLPEPGGVAWAAKNETQKKNLEENSKYYEEARKFARLCSQQSA ASYYREYVVVTGGGPGVMEAGNRGADDVGAPSIGLNIVLPHEQAPNAYVTPELCFNFHYFAIRKMHFVMRAKAVAVFPGG FGTMDEFFETLTLIQTGRMERVPVILFGKSFWKRAINLDFLAEQGTISPGDQDIIDFVDTADEAWGIVSRFYKLGE
Sequences:
>Translated_236_residues MTRRELRAVRLQLELLKPEMILAERGIRSTVILFGGARLPEPGGVAWAAKNETQKKNLEENSKYYEEARKFARLCSQQSA ASYYREYVVVTGGGPGVMEAGNRGADDVGAPSIGLNIVLPHEQAPNAYVTPELCFNFHYFAIRKMHFVMRAKAVAVFPGG FGTMDEFFETLTLIQTGRMERVPVILFGKSFWKRAINLDFLAEQGTISPGDQDIIDFVDTADEAWGIVSRFYKLGE >Mature_235_residues TRRELRAVRLQLELLKPEMILAERGIRSTVILFGGARLPEPGGVAWAAKNETQKKNLEENSKYYEEARKFARLCSQQSAA SYYREYVVVTGGGPGVMEAGNRGADDVGAPSIGLNIVLPHEQAPNAYVTPELCFNFHYFAIRKMHFVMRAKAVAVFPGGF GTMDEFFETLTLIQTGRMERVPVILFGKSFWKRAINLDFLAEQGTISPGDQDIIDFVDTADEAWGIVSRFYKLGE
Specific function: Unknown
COG id: COG1611
COG function: function code R; Predicted Rossmann fold nucleotide-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26408; Mature: 26276
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRELRAVRLQLELLKPEMILAERGIRSTVILFGGARLPEPGGVAWAAKNETQKKNLEE CCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHCCHH NSKYYEEARKFARLCSQQSAASYYREYVVVTGGGPGVMEAGNRGADDVGAPSIGLNIVLP HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC HEQAPNAYVTPELCFNFHYFAIRKMHFVMRAKAVAVFPGGFGTMDEFFETLTLIQTGRME CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCC RVPVILFGKSFWKRAINLDFLAEQGTISPGDQDIIDFVDTADEAWGIVSRFYKLGE CCCEEEECHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure TRRELRAVRLQLELLKPEMILAERGIRSTVILFGGARLPEPGGVAWAAKNETQKKNLEE CHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHCCHH NSKYYEEARKFARLCSQQSAASYYREYVVVTGGGPGVMEAGNRGADDVGAPSIGLNIVLP HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEC HEQAPNAYVTPELCFNFHYFAIRKMHFVMRAKAVAVFPGGFGTMDEFFETLTLIQTGRME CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCC RVPVILFGKSFWKRAINLDFLAEQGTISPGDQDIIDFVDTADEAWGIVSRFYKLGE CCCEEEECHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA