| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473927
Identifier: 13473927
GI number: 13473927
Start: 3716648
End: 3719440
Strand: Direct
Name: 13473927
Synonym: mlr4683
Alternate gene names: NA
Gene position: 3716648-3719440 (Clockwise)
Preceding gene: 13473926
Following gene: 13473928
Centisome position: 52.82
GC content: 52.74
Gene sequence:
>2793_bases ATGGAAGTTTACGCTGTAGCTGCTGCCCGTGCAGATGCAAGCGAGCGAGAGGCAACGCTCATACAGCCAGACAAATCTAA GTTGCCGGAAGCCCGCCGCAAGGGATTCGGCACAGCCAACGAGCAAACATATTTTACCACGATCGATCCGAACGATCCGC CCGTTACCGTTTCTATCCGACCTGAAAACATCCTCCCTACACCTAAGCGCAAGGGTGGCCAGAAGAAGCCGCCACCGACA TTGCATCTGATCATTGGGTTCGATAGTGAGTATCAGTCGCGCGATCCCATAGGGCCAACCAAGGATGAGGCCCAGGATGC CAAGAACGAGATCCTCTCATATCAGTTCTGCACGAGGTTGGTCTCAAAGGATTCGCCGCAACCGTCACCGCAATGCAGCG GGATCATCATCCCGGCAGGTAACGATCAGCGGTGGACGCTACGCGACTTCGTTGCCGCAGCGATCGGCTCGCTTATAAAG GAATGTCCTGACGTAAAGGTCCCAACTGACATCTATCTGGTCGGGCACTTCACCCGTGCCGACCTGCCAATGTTCCATGA ATTCCGCGGTGAGGCCAAACTGTCGTTGAACAACGTACGGAACACGTTCGTGTCGATCGAGAATTTTATCCCGATGACGA TCGAGGATCGCGACGGAAACGAGATCGAAAGCTTCCGGATCAGGCTCAGGGATACGATCCTGCTGGCGCCAGCCAATGCA AAAAAACTGGCAGACATCGGCGAGATGCTAGGCATTGAGAAGATCGAACTTCACAAGGATCGAGCGGCAGAGCGCAAAAT CAAGGAGGATATGAAGCAGTTTCGCGGAGAAAACTGGCCACTTTTCCGGGATTACGCCATCCGAGACGCTGAAATTTGTA CCGAGTACGCAGAACGGGTCATCAGGCAATACGATACGCTTTTCGAGCAATTCAAAATGCCGCTGACCCTCACGTCATTC GGTTCGAAACTGGTAATTTCCGATTGGGAAAACCAGGGTTGGGATCCAAACGAAGTCTTGGGTAAAGAAGAGAGGCTTCA AACTCGGTTCAACAAAAAGAAGGGATTCTCCGTCAAAAAAACGATCACTCCCTATTTCGAGGACGTGCATTTCGAGTTGG ACTTTGTCACTGAAACCTATCATGGCGGCCGGAACGAACAGTTCCTTTTCGGAATATGCGACGAGCACATATGGCGGGAT CACGACCTGAGCTCGGCCTACACCACAGCAATGTCTCTGATCGGGAAGCCGGTTTGGGAACAGATGCATCGGGTGGAGGG TATTGACGAGATCGACATGCTCGATCTTGCGTTCGTGTCAGTCGATTTCGAATTTCCCGAAACAGTCCGCTTTCCCACCC TTCCCGTCCGTTCGCCTAATGGGATCATTTTCCCTCGAAAAGGGCGGTCCTATTGCGCTGCTCCAGAAGTTGTCCTCGCC AAGCAGCTCGGCGCGCAGTTTGGGGCGATTAAAAGGTCAATTCGGGTACCGGTCGAACGCAATACCGGTATCTTTAGCAA GTTCATCACCGACTGCATTGCCAAGCGGACCGCTTTCAAAAAGGGAACGTTCGAAAACCTTTTCTGGAAGGAAGTCGGTA ACAGCACGTATGGCAAGACGGCTCAGGGTCTTCGGAAGAAACGAGTCTACGACCTTCGTGATGACGACATGGTTGAACTT CCAGAAAGTACTCTCACCCAGCCGCTCTTCGCATCGTTTATCACATCATACACACGTGCCGTGCTCGGTGAAATTCTCAA TCGGTTCCCCAGCAACGTGCAGGTGTTCAGCGTCACCACCGACGGATTTCTTTCACACGCCAGCGATGCCGAAATTATCG AAGCGACGAGTGGTCCACTGTTCCAGTCATTCCGCACAGCAAGAAGCCGCCTGGTCCAAGATGACCTACCGTTGGAGGTC AAGCACACCATCAGACAACCACTTGGATGGCGCACAAGAGGCTCGGCAACGCTCAAACTTGGCGATGGGGACAAGGCGAA CATCGTTATCCAGAAGGGCGGGATCAAATCCCAGTTCGACCTGACGGATCGGGAGGAAAACGCTCGCGTCGTTGAGCTCT TCTTCAACCGAACACCCGGCGAGACCCAGCAATACACGTCGGGCATCGGCCTGAAGGACACCATTCGCTACGGGTCCGAC TTCGTCTACCGCTCGATCACCAAACGGCTATCGATGGAATTCGACTGGAAGCGACGTCCGGTCGCCCCTCAGGATCGAAC AGTAGACTTCAATGGCAAAACGTACACACATCTGTCATTCCAATCCGAACCGTTGGACAGCCTCGAGGAATTCCTTGGGA TAAGGGCGGCCTGGGAGAAATGGGATCGCCAGCCTTTCAGGCTGCTTAAATCCGTGCCGGATTTAAGCAGTTTTCTCAAT TATTTGGAGACAAACAAGAAATCGAATCCATCATCACAAACCTATATGCGGAAGTCCGAAAATGCAGACCTTCTACGATT GAGAAGAGACATCACAAGGGCATTCCGTCATCTGCAGGCAGGGTTCGATGCAGTTCAGGCGAGGACAGGAAGGATCAGGC ACAAGGCACTGTGTGAAATCCTTATAAGTGCAGGAATTCCCTGCACGGTAACCGACGTTGACAACGCACGGAACGACTTC ATTCCCTACAAAACACCGTCGACAGACCGGGTGGTGTCGGCTCTCAACCAACTTCAGCAGGAGCATTTTCCAGAGCTGGA CATCGACCTGTTCCTCGATCAGCAAAAGTTGGAAACGAATTACTCCACCATCTCACACCCTGCCAGTCCGTGA
Upstream 100 bases:
>100_bases TCTGAAAGCAGCCTAAACCCCAGATCGAGTGTGACCGAGCCTCGCCCTCCGGGCGAGGCCTTCGGTATGTACTTTTTCGA TCAAAATCAGGGGGATCGAC
Downstream 100 bases:
>100_bases GGTGTCGAGTTCCAGGCTACGCAATTCCTTCCCATCTTTCACTGATGTCACCGTCCACCCTGCCAGACGGACCGTCAACG GTATTTTCTCCCGGTATCAA
Product: DNA-directed DNA polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 930; Mature: 930
Protein sequence:
>930_residues MEVYAVAAARADASEREATLIQPDKSKLPEARRKGFGTANEQTYFTTIDPNDPPVTVSIRPENILPTPKRKGGQKKPPPT LHLIIGFDSEYQSRDPIGPTKDEAQDAKNEILSYQFCTRLVSKDSPQPSPQCSGIIIPAGNDQRWTLRDFVAAAIGSLIK ECPDVKVPTDIYLVGHFTRADLPMFHEFRGEAKLSLNNVRNTFVSIENFIPMTIEDRDGNEIESFRIRLRDTILLAPANA KKLADIGEMLGIEKIELHKDRAAERKIKEDMKQFRGENWPLFRDYAIRDAEICTEYAERVIRQYDTLFEQFKMPLTLTSF GSKLVISDWENQGWDPNEVLGKEERLQTRFNKKKGFSVKKTITPYFEDVHFELDFVTETYHGGRNEQFLFGICDEHIWRD HDLSSAYTTAMSLIGKPVWEQMHRVEGIDEIDMLDLAFVSVDFEFPETVRFPTLPVRSPNGIIFPRKGRSYCAAPEVVLA KQLGAQFGAIKRSIRVPVERNTGIFSKFITDCIAKRTAFKKGTFENLFWKEVGNSTYGKTAQGLRKKRVYDLRDDDMVEL PESTLTQPLFASFITSYTRAVLGEILNRFPSNVQVFSVTTDGFLSHASDAEIIEATSGPLFQSFRTARSRLVQDDLPLEV KHTIRQPLGWRTRGSATLKLGDGDKANIVIQKGGIKSQFDLTDREENARVVELFFNRTPGETQQYTSGIGLKDTIRYGSD FVYRSITKRLSMEFDWKRRPVAPQDRTVDFNGKTYTHLSFQSEPLDSLEEFLGIRAAWEKWDRQPFRLLKSVPDLSSFLN YLETNKKSNPSSQTYMRKSENADLLRLRRDITRAFRHLQAGFDAVQARTGRIRHKALCEILISAGIPCTVTDVDNARNDF IPYKTPSTDRVVSALNQLQQEHFPELDIDLFLDQQKLETNYSTISHPASP
Sequences:
>Translated_930_residues MEVYAVAAARADASEREATLIQPDKSKLPEARRKGFGTANEQTYFTTIDPNDPPVTVSIRPENILPTPKRKGGQKKPPPT LHLIIGFDSEYQSRDPIGPTKDEAQDAKNEILSYQFCTRLVSKDSPQPSPQCSGIIIPAGNDQRWTLRDFVAAAIGSLIK ECPDVKVPTDIYLVGHFTRADLPMFHEFRGEAKLSLNNVRNTFVSIENFIPMTIEDRDGNEIESFRIRLRDTILLAPANA KKLADIGEMLGIEKIELHKDRAAERKIKEDMKQFRGENWPLFRDYAIRDAEICTEYAERVIRQYDTLFEQFKMPLTLTSF GSKLVISDWENQGWDPNEVLGKEERLQTRFNKKKGFSVKKTITPYFEDVHFELDFVTETYHGGRNEQFLFGICDEHIWRD HDLSSAYTTAMSLIGKPVWEQMHRVEGIDEIDMLDLAFVSVDFEFPETVRFPTLPVRSPNGIIFPRKGRSYCAAPEVVLA KQLGAQFGAIKRSIRVPVERNTGIFSKFITDCIAKRTAFKKGTFENLFWKEVGNSTYGKTAQGLRKKRVYDLRDDDMVEL PESTLTQPLFASFITSYTRAVLGEILNRFPSNVQVFSVTTDGFLSHASDAEIIEATSGPLFQSFRTARSRLVQDDLPLEV KHTIRQPLGWRTRGSATLKLGDGDKANIVIQKGGIKSQFDLTDREENARVVELFFNRTPGETQQYTSGIGLKDTIRYGSD FVYRSITKRLSMEFDWKRRPVAPQDRTVDFNGKTYTHLSFQSEPLDSLEEFLGIRAAWEKWDRQPFRLLKSVPDLSSFLN YLETNKKSNPSSQTYMRKSENADLLRLRRDITRAFRHLQAGFDAVQARTGRIRHKALCEILISAGIPCTVTDVDNARNDF IPYKTPSTDRVVSALNQLQQEHFPELDIDLFLDQQKLETNYSTISHPASP >Mature_930_residues MEVYAVAAARADASEREATLIQPDKSKLPEARRKGFGTANEQTYFTTIDPNDPPVTVSIRPENILPTPKRKGGQKKPPPT LHLIIGFDSEYQSRDPIGPTKDEAQDAKNEILSYQFCTRLVSKDSPQPSPQCSGIIIPAGNDQRWTLRDFVAAAIGSLIK ECPDVKVPTDIYLVGHFTRADLPMFHEFRGEAKLSLNNVRNTFVSIENFIPMTIEDRDGNEIESFRIRLRDTILLAPANA KKLADIGEMLGIEKIELHKDRAAERKIKEDMKQFRGENWPLFRDYAIRDAEICTEYAERVIRQYDTLFEQFKMPLTLTSF GSKLVISDWENQGWDPNEVLGKEERLQTRFNKKKGFSVKKTITPYFEDVHFELDFVTETYHGGRNEQFLFGICDEHIWRD HDLSSAYTTAMSLIGKPVWEQMHRVEGIDEIDMLDLAFVSVDFEFPETVRFPTLPVRSPNGIIFPRKGRSYCAAPEVVLA KQLGAQFGAIKRSIRVPVERNTGIFSKFITDCIAKRTAFKKGTFENLFWKEVGNSTYGKTAQGLRKKRVYDLRDDDMVEL PESTLTQPLFASFITSYTRAVLGEILNRFPSNVQVFSVTTDGFLSHASDAEIIEATSGPLFQSFRTARSRLVQDDLPLEV KHTIRQPLGWRTRGSATLKLGDGDKANIVIQKGGIKSQFDLTDREENARVVELFFNRTPGETQQYTSGIGLKDTIRYGSD FVYRSITKRLSMEFDWKRRPVAPQDRTVDFNGKTYTHLSFQSEPLDSLEEFLGIRAAWEKWDRQPFRLLKSVPDLSSFLN YLETNKKSNPSSQTYMRKSENADLLRLRRDITRAFRHLQAGFDAVQARTGRIRHKALCEILISAGIPCTVTDVDNARNDF IPYKTPSTDRVVSALNQLQQEHFPELDIDLFLDQQKLETNYSTISHPASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106125; Mature: 106125
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVYAVAAARADASEREATLIQPDKSKLPEARRKGFGTANEQTYFTTIDPNDPPVTVSIR CCEEEEEHHHCCCCCCCCEEECCCHHHCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEEC PENILPTPKRKGGQKKPPPTLHLIIGFDSEYQSRDPIGPTKDEAQDAKNEILSYQFCTRL CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VSKDSPQPSPQCSGIIIPAGNDQRWTLRDFVAAAIGSLIKECPDVKVPTDIYLVGHFTRA HHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC DLPMFHEFRGEAKLSLNNVRNTFVSIENFIPMTIEDRDGNEIESFRIRLRDTILLAPANA CCCHHHHHCCCCEEEHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHEEEEEEEEECCCCH KKLADIGEMLGIEKIELHKDRAAERKIKEDMKQFRGENWPLFRDYAIRDAEICTEYAERV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHHH IRQYDTLFEQFKMPLTLTSFGSKLVISDWENQGWDPNEVLGKEERLQTRFNKKKGFSVKK HHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEHH TITPYFEDVHFELDFVTETYHGGRNEQFLFGICDEHIWRDHDLSSAYTTAMSLIGKPVWE HCCCCHHCEEEEEEEEEHHHCCCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHCCHHHH QMHRVEGIDEIDMLDLAFVSVDFEFPETVRFPTLPVRSPNGIIFPRKGRSYCAAPEVVLA HHHHHCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH KQLGAQFGAIKRSIRVPVERNTGIFSKFITDCIAKRTAFKKGTFENLFWKEVGNSTYGKT HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHH AQGLRKKRVYDLRDDDMVELPESTLTQPLFASFITSYTRAVLGEILNRFPSNVQVFSVTT HHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC DGFLSHASDAEIIEATSGPLFQSFRTARSRLVQDDLPLEVKHTIRQPLGWRTRGSATLKL CHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEE GDGDKANIVIQKGGIKSQFDLTDREENARVVELFFNRTPGETQQYTSGIGLKDTIRYGSD CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCHHHHHCCCH FVYRSITKRLSMEFDWKRRPVAPQDRTVDFNGKTYTHLSFQSEPLDSLEEFLGIRAAWEK HHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHH WDRQPFRLLKSVPDLSSFLNYLETNKKSNPSSQTYMRKSENADLLRLRRDITRAFRHLQA HCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GFDAVQARTGRIRHKALCEILISAGIPCTVTDVDNARNDFIPYKTPSTDRVVSALNQLQQ HHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH EHFPELDIDLFLDQQKLETNYSTISHPASP HHCCCCCEEEEECHHHHHCCCHHCCCCCCC >Mature Secondary Structure MEVYAVAAARADASEREATLIQPDKSKLPEARRKGFGTANEQTYFTTIDPNDPPVTVSIR CCEEEEEHHHCCCCCCCCEEECCCHHHCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEEC PENILPTPKRKGGQKKPPPTLHLIIGFDSEYQSRDPIGPTKDEAQDAKNEILSYQFCTRL CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VSKDSPQPSPQCSGIIIPAGNDQRWTLRDFVAAAIGSLIKECPDVKVPTDIYLVGHFTRA HHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC DLPMFHEFRGEAKLSLNNVRNTFVSIENFIPMTIEDRDGNEIESFRIRLRDTILLAPANA CCCHHHHHCCCCEEEHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHEEEEEEEEECCCCH KKLADIGEMLGIEKIELHKDRAAERKIKEDMKQFRGENWPLFRDYAIRDAEICTEYAERV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHHH IRQYDTLFEQFKMPLTLTSFGSKLVISDWENQGWDPNEVLGKEERLQTRFNKKKGFSVKK HHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCHHHHCCHHHHHHHHHHHHCCCEEHH TITPYFEDVHFELDFVTETYHGGRNEQFLFGICDEHIWRDHDLSSAYTTAMSLIGKPVWE HCCCCHHCEEEEEEEEEHHHCCCCCCEEEEEECHHHHCCCCCCHHHHHHHHHHHCCHHHH QMHRVEGIDEIDMLDLAFVSVDFEFPETVRFPTLPVRSPNGIIFPRKGRSYCAAPEVVLA HHHHHCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHH KQLGAQFGAIKRSIRVPVERNTGIFSKFITDCIAKRTAFKKGTFENLFWKEVGNSTYGKT HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHH AQGLRKKRVYDLRDDDMVELPESTLTQPLFASFITSYTRAVLGEILNRFPSNVQVFSVTT HHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC DGFLSHASDAEIIEATSGPLFQSFRTARSRLVQDDLPLEVKHTIRQPLGWRTRGSATLKL CHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEE GDGDKANIVIQKGGIKSQFDLTDREENARVVELFFNRTPGETQQYTSGIGLKDTIRYGSD CCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCHHHHHCCCH FVYRSITKRLSMEFDWKRRPVAPQDRTVDFNGKTYTHLSFQSEPLDSLEEFLGIRAAWEK HHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHH WDRQPFRLLKSVPDLSSFLNYLETNKKSNPSSQTYMRKSENADLLRLRRDITRAFRHLQA HCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GFDAVQARTGRIRHKALCEILISAGIPCTVTDVDNARNDFIPYKTPSTDRVVSALNQLQQ HHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH EHFPELDIDLFLDQQKLETNYSTISHPASP HHCCCCCEEEEECHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA