Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473926

Identifier: 13473926

GI number: 13473926

Start: 3715421

End: 3716563

Strand: Direct

Name: 13473926

Synonym: mlr4682

Alternate gene names: NA

Gene position: 3715421-3716563 (Clockwise)

Preceding gene: 13473921

Following gene: 13473927

Centisome position: 52.81

GC content: 52.58

Gene sequence:

>1143_bases
ATGCAAAACCTGATTTCAATTTTATTTTTCAAGGGTACTTGCGCTGCAATTTTGTCGCACCCATTTAGCCGCAACGCTGA
CAGGGAAACCTCTGCCGGCGCCCAACGGAGGGTCCATTTGCGCATGACAGGAACGATACCCGCAAAATCACAACTCGGTA
AACTTGGCCTTAGGGCCGCAAAGGAACACTCCAGCGACCTATATGTATACGCTGGACGGATCGACGAAAGAGGGTACGAA
GCGCTTCGCAACGAAGTGTTATTTGCCCGAAGATCAGAAAAAGCCATTCTAATTCTGATCACTACCGGCGGCTCTGGCTC
CGCAGCTTTCAAAATGGCCAGGCTCTTCCAAACGTTCTACGACAGTTTCGATATCTTTGTTCCTGCACACTGCAAAAGTG
CTGGGACAATTCTAGCTCTTGGCGCTAACCGGTTATGGATGTCTCCGTTTGCGGAACTTGGACCGATAGACGCTCAGGGC
CTACAACGAGATGAACTCGGAGTATTGGATTCGAGCTTGTCCACGCGAACCTCCCTCGAAACCATCATGGAAACTTCGTT
CCGCTTCTTCAACGACTCTGTCGTCAGTCTCGCCACGCTTAGTCAGGGCAGTATCAGCTTCAAGCTCGCAGCGGAGATAT
GCGGAGCAATGGCTACCAACATCATGTCACCGTTGGTTGCCAGAATAGATCCCGCTGTGCTCGGTCGCGAGAAGCGTGAC
GTGGAACAGGGGATTAAATATGGAAATCAGCTCGCGTCGATATCGGGCAATGCAGACGAAGATACCGTAGTCAGTTTGGC
TCAGGACTATCCCTACCATGGTTTTGTGATCGACTTCGCGCACGCCAAAACGCTGTTTCGGCAGGTCCATCGGGCAGAAG
GGACGCTACTCGCGTTGGGGAACGAACTCGGCGACGCCATACGCCACGCATCGGAGGGGGACATAGAAATCAAGACCCTC
CACAAAACAAAGCTTTCCAACGCTAAAGAAGCGACAAGCCACGGGACACAAGATATTTCCGATGGCTTTCCGGAAATGGC
CGACTATTGCGGCCCTCCAGGCGAAACTTACGCTGACTGGTTGGATGAAACCCGCCAAGCAAACGACGACCAGTCGCCGG
CCGAGGATCTGAAAGCAGCCTAA

Upstream 100 bases:

>100_bases
AGAGGCGGCCGTAGGTTTTCAACCGAGCGGATGTGCGGCCGGTTGCTGCATGGGCTGATTCGACTGATCCCAGAAGCCTC
GACCGGTCTTCAGCGCAGAC

Downstream 100 bases:

>100_bases
ACCCCAGATCGAGTGTGACCGAGCCTCGCCCTCCGGGCGAGGCCTTCGGTATGTACTTTTTCGATCAAAATCAGGGGGAT
CGACATGGAAGTTTACGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAAKEHSSDLYVYAGRIDERGYE
ALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFYDSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQG
LQRDELGVLDSSLSTRTSLETIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD
VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALGNELGDAIRHASEGDIEIKTL
HKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADWLDETRQANDDQSPAEDLKAA

Sequences:

>Translated_380_residues
MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAAKEHSSDLYVYAGRIDERGYE
ALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFYDSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQG
LQRDELGVLDSSLSTRTSLETIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD
VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALGNELGDAIRHASEGDIEIKTL
HKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADWLDETRQANDDQSPAEDLKAA
>Mature_380_residues
MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAAKEHSSDLYVYAGRIDERGYE
ALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFYDSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQG
LQRDELGVLDSSLSTRTSLETIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD
VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALGNELGDAIRHASEGDIEIKTL
HKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADWLDETRQANDDQSPAEDLKAA

Specific function: Unknown

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41359; Mature: 41359

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
KEHSSDLYVYAGRIDERGYEALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFY
HCCCCCEEEEECCCCHHHHHHHHHHHHHEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH
DSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQGLQRDELGVLDSSLSTRTSLE
CCCCEEEECCCCCCCCEEEECCCCHHHCCHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHH
TIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD
HHHHHHHHHHCCCHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH
VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALG
HHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEC
NELGDAIRHASEGDIEIKTLHKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADW
HHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHCCCCHHHCCCHHHHHHCCCCCCHHHHH
LDETRQANDDQSPAEDLKAA
HHHHHCCCCCCCCHHHHCCC
>Mature Secondary Structure
MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
KEHSSDLYVYAGRIDERGYEALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFY
HCCCCCEEEEECCCCHHHHHHHHHHHHHEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH
DSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQGLQRDELGVLDSSLSTRTSLE
CCCCEEEECCCCCCCCEEEECCCCHHHCCHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHH
TIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD
HHHHHHHHHHCCCHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH
VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALG
HHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEC
NELGDAIRHASEGDIEIKTLHKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADW
HHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHCCCCHHHCCCHHHHHHCCCCCCHHHHH
LDETRQANDDQSPAEDLKAA
HHHHHCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA