| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473926
Identifier: 13473926
GI number: 13473926
Start: 3715421
End: 3716563
Strand: Direct
Name: 13473926
Synonym: mlr4682
Alternate gene names: NA
Gene position: 3715421-3716563 (Clockwise)
Preceding gene: 13473921
Following gene: 13473927
Centisome position: 52.81
GC content: 52.58
Gene sequence:
>1143_bases ATGCAAAACCTGATTTCAATTTTATTTTTCAAGGGTACTTGCGCTGCAATTTTGTCGCACCCATTTAGCCGCAACGCTGA CAGGGAAACCTCTGCCGGCGCCCAACGGAGGGTCCATTTGCGCATGACAGGAACGATACCCGCAAAATCACAACTCGGTA AACTTGGCCTTAGGGCCGCAAAGGAACACTCCAGCGACCTATATGTATACGCTGGACGGATCGACGAAAGAGGGTACGAA GCGCTTCGCAACGAAGTGTTATTTGCCCGAAGATCAGAAAAAGCCATTCTAATTCTGATCACTACCGGCGGCTCTGGCTC CGCAGCTTTCAAAATGGCCAGGCTCTTCCAAACGTTCTACGACAGTTTCGATATCTTTGTTCCTGCACACTGCAAAAGTG CTGGGACAATTCTAGCTCTTGGCGCTAACCGGTTATGGATGTCTCCGTTTGCGGAACTTGGACCGATAGACGCTCAGGGC CTACAACGAGATGAACTCGGAGTATTGGATTCGAGCTTGTCCACGCGAACCTCCCTCGAAACCATCATGGAAACTTCGTT CCGCTTCTTCAACGACTCTGTCGTCAGTCTCGCCACGCTTAGTCAGGGCAGTATCAGCTTCAAGCTCGCAGCGGAGATAT GCGGAGCAATGGCTACCAACATCATGTCACCGTTGGTTGCCAGAATAGATCCCGCTGTGCTCGGTCGCGAGAAGCGTGAC GTGGAACAGGGGATTAAATATGGAAATCAGCTCGCGTCGATATCGGGCAATGCAGACGAAGATACCGTAGTCAGTTTGGC TCAGGACTATCCCTACCATGGTTTTGTGATCGACTTCGCGCACGCCAAAACGCTGTTTCGGCAGGTCCATCGGGCAGAAG GGACGCTACTCGCGTTGGGGAACGAACTCGGCGACGCCATACGCCACGCATCGGAGGGGGACATAGAAATCAAGACCCTC CACAAAACAAAGCTTTCCAACGCTAAAGAAGCGACAAGCCACGGGACACAAGATATTTCCGATGGCTTTCCGGAAATGGC CGACTATTGCGGCCCTCCAGGCGAAACTTACGCTGACTGGTTGGATGAAACCCGCCAAGCAAACGACGACCAGTCGCCGG CCGAGGATCTGAAAGCAGCCTAA
Upstream 100 bases:
>100_bases AGAGGCGGCCGTAGGTTTTCAACCGAGCGGATGTGCGGCCGGTTGCTGCATGGGCTGATTCGACTGATCCCAGAAGCCTC GACCGGTCTTCAGCGCAGAC
Downstream 100 bases:
>100_bases ACCCCAGATCGAGTGTGACCGAGCCTCGCCCTCCGGGCGAGGCCTTCGGTATGTACTTTTTCGATCAAAATCAGGGGGAT CGACATGGAAGTTTACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAAKEHSSDLYVYAGRIDERGYE ALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFYDSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQG LQRDELGVLDSSLSTRTSLETIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALGNELGDAIRHASEGDIEIKTL HKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADWLDETRQANDDQSPAEDLKAA
Sequences:
>Translated_380_residues MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAAKEHSSDLYVYAGRIDERGYE ALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFYDSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQG LQRDELGVLDSSLSTRTSLETIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALGNELGDAIRHASEGDIEIKTL HKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADWLDETRQANDDQSPAEDLKAA >Mature_380_residues MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAAKEHSSDLYVYAGRIDERGYE ALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFYDSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQG LQRDELGVLDSSLSTRTSLETIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALGNELGDAIRHASEGDIEIKTL HKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADWLDETRQANDDQSPAEDLKAA
Specific function: Unknown
COG id: COG0616
COG function: function code OU; Periplasmic serine proteases (ClpP class)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41359; Mature: 41359
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH KEHSSDLYVYAGRIDERGYEALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFY HCCCCCEEEEECCCCHHHHHHHHHHHHHEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH DSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQGLQRDELGVLDSSLSTRTSLE CCCCEEEECCCCCCCCEEEECCCCHHHCCHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHH TIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD HHHHHHHHHHCCCHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALG HHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEC NELGDAIRHASEGDIEIKTLHKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADW HHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHCCCCHHHCCCHHHHHHCCCCCCHHHHH LDETRQANDDQSPAEDLKAA HHHHHCCCCCCCCHHHHCCC >Mature Secondary Structure MQNLISILFFKGTCAAILSHPFSRNADRETSAGAQRRVHLRMTGTIPAKSQLGKLGLRAA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH KEHSSDLYVYAGRIDERGYEALRNEVLFARRSEKAILILITTGGSGSAAFKMARLFQTFY HCCCCCEEEEECCCCHHHHHHHHHHHHHEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH DSFDIFVPAHCKSAGTILALGANRLWMSPFAELGPIDAQGLQRDELGVLDSSLSTRTSLE CCCCEEEECCCCCCCCEEEECCCCHHHCCHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHH TIMETSFRFFNDSVVSLATLSQGSISFKLAAEICGAMATNIMSPLVARIDPAVLGREKRD HHHHHHHHHHCCCHHHHEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH VEQGIKYGNQLASISGNADEDTVVSLAQDYPYHGFVIDFAHAKTLFRQVHRAEGTLLALG HHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEC NELGDAIRHASEGDIEIKTLHKTKLSNAKEATSHGTQDISDGFPEMADYCGPPGETYADW HHHHHHHHCCCCCCEEEEEEHHHHHCCHHHHHHCCCCHHHCCCHHHHHHCCCCCCHHHHH LDETRQANDDQSPAEDLKAA HHHHHCCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA