| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13473928
Identifier: 13473928
GI number: 13473928
Start: 3719829
End: 3720200
Strand: Direct
Name: 13473928
Synonym: mlr4684
Alternate gene names: NA
Gene position: 3719829-3720200 (Clockwise)
Preceding gene: 13473927
Following gene: 13473929
Centisome position: 52.87
GC content: 60.48
Gene sequence:
>372_bases ATGGCATTCGAAGGACTGAAGCTGGTCGCCACCGCGAAGCAGGACGCATCGGACCCTGCATCCAAGCGTCGGCAAAGGCT GGTCATGCAGATCGACCATCAGCTGTACATGGCCGAACCGGAGAACCTAGCGCGTAAGTTCCGTGGCCGCTGGTGGACGA TCGGCATCGACGGCAAACCGACGCTGGCAATCAAGTACGGCAAAATCCCCCTGGAGCTTGCCAAGGGCAAACATGCGATT GCGTGCGCCGATATCGCCGGCGTCACCGATGCCCTTCAAAAGGCCCGAGTGGCAGCTGTCGACGGTACATTCGACAGCCA GTTGGCCAGTGTGTCCGAGCAGGTCAGGGCTCGATTCAAGAAGGGCCGCTGA
Upstream 100 bases:
>100_bases AGCCATTCTTGACGGGCGGTGTCTGAATTCCTTCATCGCCGTTGACCTTCTCAGTCGTTCGACGGGATGCCGTCGTCGAT CAACAAGGAAGGAGATTACA
Downstream 100 bases:
>100_bases CCCCTGCATAGAAAACGATGCCCTATCCCGCTGGGAACGGCGGGATGGACCCCACTATGACTTCTTCTTTCGGCCCGCCC TCAAAGTCGCGGGCACCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MAFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKPTLAIKYGKIPLELAKGKHAI ACADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFKKGR
Sequences:
>Translated_123_residues MAFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKPTLAIKYGKIPLELAKGKHAI ACADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFKKGR >Mature_122_residues AFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKPTLAIKYGKIPLELAKGKHAIA CADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFKKGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13565; Mature: 13434
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKP CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHCCCEEEEEECCCC TLAIKYGKIPLELAKGKHAIACADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFK EEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHH KGR CCC >Mature Secondary Structure AFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKP CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHCCCEEEEEECCCC TLAIKYGKIPLELAKGKHAIACADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFK EEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHH KGR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA