Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473928

Identifier: 13473928

GI number: 13473928

Start: 3719829

End: 3720200

Strand: Direct

Name: 13473928

Synonym: mlr4684

Alternate gene names: NA

Gene position: 3719829-3720200 (Clockwise)

Preceding gene: 13473927

Following gene: 13473929

Centisome position: 52.87

GC content: 60.48

Gene sequence:

>372_bases
ATGGCATTCGAAGGACTGAAGCTGGTCGCCACCGCGAAGCAGGACGCATCGGACCCTGCATCCAAGCGTCGGCAAAGGCT
GGTCATGCAGATCGACCATCAGCTGTACATGGCCGAACCGGAGAACCTAGCGCGTAAGTTCCGTGGCCGCTGGTGGACGA
TCGGCATCGACGGCAAACCGACGCTGGCAATCAAGTACGGCAAAATCCCCCTGGAGCTTGCCAAGGGCAAACATGCGATT
GCGTGCGCCGATATCGCCGGCGTCACCGATGCCCTTCAAAAGGCCCGAGTGGCAGCTGTCGACGGTACATTCGACAGCCA
GTTGGCCAGTGTGTCCGAGCAGGTCAGGGCTCGATTCAAGAAGGGCCGCTGA

Upstream 100 bases:

>100_bases
AGCCATTCTTGACGGGCGGTGTCTGAATTCCTTCATCGCCGTTGACCTTCTCAGTCGTTCGACGGGATGCCGTCGTCGAT
CAACAAGGAAGGAGATTACA

Downstream 100 bases:

>100_bases
CCCCTGCATAGAAAACGATGCCCTATCCCGCTGGGAACGGCGGGATGGACCCCACTATGACTTCTTCTTTCGGCCCGCCC
TCAAAGTCGCGGGCACCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MAFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKPTLAIKYGKIPLELAKGKHAI
ACADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFKKGR

Sequences:

>Translated_123_residues
MAFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKPTLAIKYGKIPLELAKGKHAI
ACADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFKKGR
>Mature_122_residues
AFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKPTLAIKYGKIPLELAKGKHAIA
CADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFKKGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13565; Mature: 13434

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKP
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHCCCEEEEEECCCC
TLAIKYGKIPLELAKGKHAIACADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFK
EEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHH
KGR
CCC
>Mature Secondary Structure 
AFEGLKLVATAKQDASDPASKRRQRLVMQIDHQLYMAEPENLARKFRGRWWTIGIDGKP
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHCCCEEEEEECCCC
TLAIKYGKIPLELAKGKHAIACADIAGVTDALQKARVAAVDGTFDSQLASVSEQVRARFK
EEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHH
KGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA