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The map label for this gene is dadA [H]

Identifier: 13473395

GI number: 13473395

Start: 3182595

End: 3183908

Strand: Reverse

Name: dadA [H]

Synonym: mll3980

Alternate gene names: 13473395

Gene position: 3183908-3182595 (Counterclockwise)

Preceding gene: 13473396

Following gene: 13473394

Centisome position: 45.25

GC content: 67.5

Gene sequence:

>1314_bases
GTGCCAGGAAATTCCGAATCCCCGGAACAGGAGCAGCGCTCGGCCGCTGGGGCACCTTCTCCCCGTGAGCGGGGAGGAGG
TGAGGACATCGCCATCATCGGCGGCGGCATCATCGGCATCTGTGCCGCGGCCTTCCTCGCCGAGGCGGGGCGCAGCGTGA
CAATCTTCGACCGCAGCGGCATCTGCGAGGAGACGAGTTCCGGCAATGCGGCGGCCTTCGCCTTCTCGGACGTGCTGCCG
CTGGCGCACAAAGGCATGATCAAGAACCTGCCGAAATGGCTGGCCGATCCGCTCGGTCCGCTCAGCATTCCGCCCGCCTA
TCTGCCGCGGCTGCTGCCCTGGCTGATCCGCTTCTGGCGCGCCGGCGCGCCGGCGAAGTATGAAGCGAGCCTCATCGCCC
AGGCCGGCATGATGAAACTCGCCGAAGCGGAATGGATGGACCTGCTCGATCGCTCCGGCACGCGGCCGATGCTGCGCGAG
GATGGCTCGCTGGAGCTCTACGAGAGCGAAGCCGAGTTCCGCGCCTCGCTGTCGGGCTGGGCCGCGCGCGAGCGTTTCGG
CATCGGCTTTCGCCACGTCGAGGGCGAAGGCCTGGTGGGTTTGCAGCCGGGCCTCTCCCCGCGCTTCATCAAGGGCACCT
TCGTGCCGGGCTGGAAGACGGTCGCCGATCCAAAACTGCTCGGCAAGGCGGTGTGGGCTTATGCCCGGGCCAAGGGCGCC
CGCTTTGAAATGGCCCGCATCGACCAGATCGCGGCGGACCAGGATGGCGCGACGCTGATGCTGGCCGACAGCACGACCAG
GCAGGCGAGGCAGCTCGTCATCGCTGCCGGCGCCTGGTCGCATCTTCTGGCGCGACAGCTTGGCGACCGCATTCCGCTGG
AGACCGAGCGCGGCTACAACACGACGCTGCCCAGGAGCGCCTTCGATGTGAAGCGGCAGCTGATCTTCTCAGGCCATGGC
TTCGTCATCACGCCGCTCGACACGGGCCTGCGCGTCGGCGGCGCCGTCGAGCTCGGCGGCATCGAGCGGCCGCCCAATTT
TGCCAGGTCGAAGGCGCTGTTGCGGAAGGCGCAGCAATTCCTGCCCGGGCTCAATCCCTCGGGCGGGCGCGAATGGATGG
GATTCCGGCCCTCGCTGCCGGATTCGGTGCCTGTCATCGGTAAGGCGTCGGGAAGCCGGCCGGTGGTCTATGCTTTCGGC
CACGGCCATCTCGGCCTCACCCAGGCCGCGGCGACGGGACGGTTGATCCGGGAAATCATCATGGGGCAGGTTGCGTCTAT
TGATCTCGCCCCCTTCGGTCCACAACGGTTTTGA

Upstream 100 bases:

>100_bases
TACGGGATGCGCTGGCGGCGCGGCCGAAGCTGCCGTCGCTCCAGACGTCTCCTCTATCGGCGGACAGACAGGTGGCAGCC
GAATAAGGGACAGCACCGAC

Downstream 100 bases:

>100_bases
AATTTTTCGAGGAACGACATGGCCAAGAAATCCTTCTTCTGCATCGACGGCCACACATGCGGCAATCCGGTGCGGCTGGT
CGCCGGCGGCGGCCCGCTGC

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MPGNSESPEQEQRSAAGAPSPRERGGGEDIAIIGGGIIGICAAAFLAEAGRSVTIFDRSGICEETSSGNAAAFAFSDVLP
LAHKGMIKNLPKWLADPLGPLSIPPAYLPRLLPWLIRFWRAGAPAKYEASLIAQAGMMKLAEAEWMDLLDRSGTRPMLRE
DGSLELYESEAEFRASLSGWAARERFGIGFRHVEGEGLVGLQPGLSPRFIKGTFVPGWKTVADPKLLGKAVWAYARAKGA
RFEMARIDQIAADQDGATLMLADSTTRQARQLVIAAGAWSHLLARQLGDRIPLETERGYNTTLPRSAFDVKRQLIFSGHG
FVITPLDTGLRVGGAVELGGIERPPNFARSKALLRKAQQFLPGLNPSGGREWMGFRPSLPDSVPVIGKASGSRPVVYAFG
HGHLGLTQAAATGRLIREIIMGQVASIDLAPFGPQRF

Sequences:

>Translated_437_residues
MPGNSESPEQEQRSAAGAPSPRERGGGEDIAIIGGGIIGICAAAFLAEAGRSVTIFDRSGICEETSSGNAAAFAFSDVLP
LAHKGMIKNLPKWLADPLGPLSIPPAYLPRLLPWLIRFWRAGAPAKYEASLIAQAGMMKLAEAEWMDLLDRSGTRPMLRE
DGSLELYESEAEFRASLSGWAARERFGIGFRHVEGEGLVGLQPGLSPRFIKGTFVPGWKTVADPKLLGKAVWAYARAKGA
RFEMARIDQIAADQDGATLMLADSTTRQARQLVIAAGAWSHLLARQLGDRIPLETERGYNTTLPRSAFDVKRQLIFSGHG
FVITPLDTGLRVGGAVELGGIERPPNFARSKALLRKAQQFLPGLNPSGGREWMGFRPSLPDSVPVIGKASGSRPVVYAFG
HGHLGLTQAAATGRLIREIIMGQVASIDLAPFGPQRF
>Mature_436_residues
PGNSESPEQEQRSAAGAPSPRERGGGEDIAIIGGGIIGICAAAFLAEAGRSVTIFDRSGICEETSSGNAAAFAFSDVLPL
AHKGMIKNLPKWLADPLGPLSIPPAYLPRLLPWLIRFWRAGAPAKYEASLIAQAGMMKLAEAEWMDLLDRSGTRPMLRED
GSLELYESEAEFRASLSGWAARERFGIGFRHVEGEGLVGLQPGLSPRFIKGTFVPGWKTVADPKLLGKAVWAYARAKGAR
FEMARIDQIAADQDGATLMLADSTTRQARQLVIAAGAWSHLLARQLGDRIPLETERGYNTTLPRSAFDVKRQLIFSGHGF
VITPLDTGLRVGGAVELGGIERPPNFARSKALLRKAQQFLPGLNPSGGREWMGFRPSLPDSVPVIGKASGSRPVVYAFGH
GHLGLTQAAATGRLIREIIMGQVASIDLAPFGPQRF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=424, Percent_Identity=25.7075471698113, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46927; Mature: 46796

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNSESPEQEQRSAAGAPSPRERGGGEDIAIIGGGIIGICAAAFLAEAGRSVTIFDRSG
CCCCCCCCHHHHHHCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
ICEETSSGNAAAFAFSDVLPLAHKGMIKNLPKWLADPLGPLSIPPAYLPRLLPWLIRFWR
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
AGAPAKYEASLIAQAGMMKLAEAEWMDLLDRSGTRPMLREDGSLELYESEAEFRASLSGW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECHHHHHHHHHHH
AARERFGIGFRHVEGEGLVGLQPGLSPRFIKGTFVPGWKTVADPKLLGKAVWAYARAKGA
HHHHHHCCCEEEECCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
RFEMARIDQIAADQDGATLMLADSTTRQARQLVIAAGAWSHLLARQLGDRIPLETERGYN
EEHHHHHHHHHCCCCCCEEEEECCCHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCC
TTLPRSAFDVKRQLIFSGHGFVITPLDTGLRVGGAVELGGIERPPNFARSKALLRKAQQF
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
LPGLNPSGGREWMGFRPSLPDSVPVIGKASGSRPVVYAFGHGHLGLTQAAATGRLIREII
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
MGQVASIDLAPFGPQRF
HHHHHEEECCCCCCCCC
>Mature Secondary Structure 
PGNSESPEQEQRSAAGAPSPRERGGGEDIAIIGGGIIGICAAAFLAEAGRSVTIFDRSG
CCCCCCCHHHHHHCCCCCCHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
ICEETSSGNAAAFAFSDVLPLAHKGMIKNLPKWLADPLGPLSIPPAYLPRLLPWLIRFWR
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
AGAPAKYEASLIAQAGMMKLAEAEWMDLLDRSGTRPMLREDGSLELYESEAEFRASLSGW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEEECHHHHHHHHHHH
AARERFGIGFRHVEGEGLVGLQPGLSPRFIKGTFVPGWKTVADPKLLGKAVWAYARAKGA
HHHHHHCCCEEEECCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
RFEMARIDQIAADQDGATLMLADSTTRQARQLVIAAGAWSHLLARQLGDRIPLETERGYN
EEHHHHHHHHHCCCCCCEEEEECCCHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCC
TTLPRSAFDVKRQLIFSGHGFVITPLDTGLRVGGAVELGGIERPPNFARSKALLRKAQQF
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHH
LPGLNPSGGREWMGFRPSLPDSVPVIGKASGSRPVVYAFGHGHLGLTQAAATGRLIREII
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
MGQVASIDLAPFGPQRF
HHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA