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The map label for this gene is 13473394

Identifier: 13473394

GI number: 13473394

Start: 3181575

End: 3182576

Strand: Reverse

Name: 13473394

Synonym: mll3979

Alternate gene names: NA

Gene position: 3182576-3181575 (Counterclockwise)

Preceding gene: 13473395

Following gene: 13473393

Centisome position: 45.23

GC content: 63.67

Gene sequence:

>1002_bases
ATGGCCAAGAAATCCTTCTTCTGCATCGACGGCCACACATGCGGCAATCCGGTGCGGCTGGTCGCCGGCGGCGGCCCGCT
GCTCGAGGGGTCGACGATGATGGAGCGGCGTGCGCATTTCCTGGCCGAGTATGACTGGATCCGCACCGGGCTGATGTTCG
AGCCGCGCGGCCATGACGTGATGTCGGGTTCGATCCTCTATCCGCCGACGCGCGAGGATTGCGACATCGCCATCCTGTTC
ATCGAGACCTCCGGCTGCCTGCCGATGTGCGGCCACGGCACCATCGGCACGGTGACGATGGCCATCGAACACGGGCTGAT
CAAGCCGAAGACGCCGGGCGTGCTGAGGCTGGATACGCCGGCCGGGCTGGTCATCGCCGAATACAAACAGGTCGGCGAAT
ATGTCGAGGAGGTGCGCATCACCAACGTGCCGTCTTTCCTCCACGCCGAGGGTCTGACGGTCGAATGCCCCGGGCTCGGC
GAGATCACCGTCGATGTCGCCTATGGCGGAAATTTCTACGCCATCGTCGAGCCACAGGAGAACTATCGCGACATGGCCGA
CCATTCGGCTGGCGACCTCATCGCCTGGAGCCCGGTGGTGCGGCAGCGGCTCAACGAGAAGTATTCCTTCGTGCATCCGG
AAAACCCCGGCATCAACAGGCTGTCGCACATGCTGTGGACCGGCAAGCCGACAGTGGAAGGGGCCGACGCCCGCAACGCC
GTCTTCTACGGCGACAAGGCGATCGACCGCTCACCATGCGGCACAGGCACCTCGGCGCGCATGGCGCAGCTTCATGCCAA
GGGCAAACTCAAGGCCGGCGACGCCTTCGTGCACGAATCGATCATCGGTTCGCTGTTCAAGGGCAAGGTCGAAAAGGAGG
TCACTGTCGCGGGCAAACCGGCGATCATCCCTTCGATCGGCGGCTGGGCGCGCCTGACCGGACTGAACACGATCTTCATC
GACGACCGCGATCCGTTCGCGCATGGTTTCGTAGTCACGTGA

Upstream 100 bases:

>100_bases
GACGGGACGGTTGATCCGGGAAATCATCATGGGGCAGGTTGCGTCTATTGATCTCGCCCCCTTCGGTCCACAACGGTTTT
GAAATTTTTCGAGGAACGAC

Downstream 100 bases:

>100_bases
CGAGAATCCTGACCCTACGGAAAGGAGTGTGGCGAAAAGACGAACCCTATCAGGAACGCAACGATTCCTCTTATCACCTA
ATTTTGACGGTGATTTCTTC

Product: hydroxyproline-2-epimerase

Products: NA

Alternate protein names: Hydroxyproline-2-epimerase; HyPRE [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MAKKSFFCIDGHTCGNPVRLVAGGGPLLEGSTMMERRAHFLAEYDWIRTGLMFEPRGHDVMSGSILYPPTREDCDIAILF
IETSGCLPMCGHGTIGTVTMAIEHGLIKPKTPGVLRLDTPAGLVIAEYKQVGEYVEEVRITNVPSFLHAEGLTVECPGLG
EITVDVAYGGNFYAIVEPQENYRDMADHSAGDLIAWSPVVRQRLNEKYSFVHPENPGINRLSHMLWTGKPTVEGADARNA
VFYGDKAIDRSPCGTGTSARMAQLHAKGKLKAGDAFVHESIIGSLFKGKVEKEVTVAGKPAIIPSIGGWARLTGLNTIFI
DDRDPFAHGFVVT

Sequences:

>Translated_333_residues
MAKKSFFCIDGHTCGNPVRLVAGGGPLLEGSTMMERRAHFLAEYDWIRTGLMFEPRGHDVMSGSILYPPTREDCDIAILF
IETSGCLPMCGHGTIGTVTMAIEHGLIKPKTPGVLRLDTPAGLVIAEYKQVGEYVEEVRITNVPSFLHAEGLTVECPGLG
EITVDVAYGGNFYAIVEPQENYRDMADHSAGDLIAWSPVVRQRLNEKYSFVHPENPGINRLSHMLWTGKPTVEGADARNA
VFYGDKAIDRSPCGTGTSARMAQLHAKGKLKAGDAFVHESIIGSLFKGKVEKEVTVAGKPAIIPSIGGWARLTGLNTIFI
DDRDPFAHGFVVT
>Mature_332_residues
AKKSFFCIDGHTCGNPVRLVAGGGPLLEGSTMMERRAHFLAEYDWIRTGLMFEPRGHDVMSGSILYPPTREDCDIAILFI
ETSGCLPMCGHGTIGTVTMAIEHGLIKPKTPGVLRLDTPAGLVIAEYKQVGEYVEEVRITNVPSFLHAEGLTVECPGLGE
ITVDVAYGGNFYAIVEPQENYRDMADHSAGDLIAWSPVVRQRLNEKYSFVHPENPGINRLSHMLWTGKPTVEGADARNAV
FYGDKAIDRSPCGTGTSARMAQLHAKGKLKAGDAFVHESIIGSLFKGKVEKEVTVAGKPAIIPSIGGWARLTGLNTIFID
DRDPFAHGFVVT

Specific function: Allows intracellular utilization of 4-hydroxyproline, one of the major constituents of host collagen, by converting 4- hydroxy-L-proline to 4-hydroxy-D-proline, which can be further metabolized by intracellular 4-hydroxy-D-proline oxidases. Strong B-cell

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family. 4- hydroxyproline epimerase subfamily [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=333, Percent_Identity=33.6336336336336, Blast_Score=183, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: =5.1.1.8 [H]

Molecular weight: Translated: 36142; Mature: 36011

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKSFFCIDGHTCGNPVRLVAGGGPLLEGSTMMERRAHFLAEYDWIRTGLMFEPRGHDV
CCCCCEEEECCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
MSGSILYPPTREDCDIAILFIETSGCLPMCGHGTIGTVTMAIEHGLIKPKTPGVLRLDTP
CCCCEECCCCCCCCCEEEEEEECCCCCEECCCCCCEEEEEEECCCCCCCCCCCEEEECCC
AGLVIAEYKQVGEYVEEVRITNVPSFLHAEGLTVECPGLGEITVDVAYGGNFYAIVEPQE
CCEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCEEEEEEEECCCEEEEECCHH
NYRDMADHSAGDLIAWSPVVRQRLNEKYSFVHPENPGINRLSHMLWTGKPTVEGADARNA
HHHHHHCCCCCCEEEECHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCE
VFYGDKAIDRSPCGTGTSARMAQLHAKGKLKAGDAFVHESIIGSLFKGKVEKEVTVAGKP
EEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
AIIPSIGGWARLTGLNTIFIDDRDPFAHGFVVT
EEECCCCCCEEEECCEEEEEECCCCCCCCCEEC
>Mature Secondary Structure 
AKKSFFCIDGHTCGNPVRLVAGGGPLLEGSTMMERRAHFLAEYDWIRTGLMFEPRGHDV
CCCCEEEECCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
MSGSILYPPTREDCDIAILFIETSGCLPMCGHGTIGTVTMAIEHGLIKPKTPGVLRLDTP
CCCCEECCCCCCCCCEEEEEEECCCCCEECCCCCCEEEEEEECCCCCCCCCCCEEEECCC
AGLVIAEYKQVGEYVEEVRITNVPSFLHAEGLTVECPGLGEITVDVAYGGNFYAIVEPQE
CCEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCCCCEEEEEEEECCCEEEEECCHH
NYRDMADHSAGDLIAWSPVVRQRLNEKYSFVHPENPGINRLSHMLWTGKPTVEGADARNA
HHHHHHCCCCCCEEEECHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCE
VFYGDKAIDRSPCGTGTSARMAQLHAKGKLKAGDAFVHESIIGSLFKGKVEKEVTVAGKP
EEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
AIIPSIGGWARLTGLNTIFIDDRDPFAHGFVVT
EEECCCCCCEEEECCEEEEEECCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA