Click here to switch to the map view.

The map label for this gene is bioC [C]

Identifier: 13473347

GI number: 13473347

Start: 3138507

End: 3139235

Strand: Reverse

Name: bioC [C]

Synonym: mll3908

Alternate gene names: 13473347

Gene position: 3139235-3138507 (Counterclockwise)

Preceding gene: 13473348

Following gene: 13473346

Centisome position: 44.62

GC content: 66.12

Gene sequence:

>729_bases
ATGGCGCAGAATATCTACGACCAGCCGGATTTCTTCGCGGGCTACAGCCAGCTTGGCCGGTCGATCGAAGGCCTTGACGG
CGCCGCCGAATGGCCGGCGCTGCGCGCGATGCTGCCTGAAGTCGGCGGATTGCGGATCGTCGACCTCGGCTGCGGTTTCG
GCTGGTTCTGCCGCTGGGCGCACGAGCACGGGGCGAGCTATGTCCTTGGGCTGGACCTGTCGGAGAAGATGCTGGCCCGG
GCGAGGGCCGCCGGCCCGGACACAGGCATCACCTACGAGCGTGCCGACCTCGACAAGCTCCATCTGCCGCAAGACAGCTT
CGATCTCGCCTACAGCTCGCTTGCGCTGCATTATGTCGAGGATGTCGCGCGGCTGTTCAGGACGGTGCACCAGGCGCTGT
CGCCCGGCGGCCATTTCGTCTTCTCGACGGAACATCCGATCTACATGGCCCCGGCCAGGCCCGGCTGGGCGATCGATGCC
GAAGGCCGCAGGACATGGCCTATCGACCGCTATCTGGTGGAAGGCCCGCGCAAGACCGACTGGCTGGCCAAGGGCGTGGT
GAAACACCACCGCACTGTCGGCACGACGCTGAACGCGCTGATCCGGTCCGGTTTCGCGATCGAGCATGTCGAGGAGTTCT
GTCCGACAGACGCGCAGATCACGGCCAGGCCGGAACTGGCGGAAGAGCTCGATCGGCCGATGTTCCTGCTGGTCTCGGCG
CGCCGCTAG

Upstream 100 bases:

>100_bases
TCTTCATCTTCGTCTTGATCCCGCATGGCCGTGGTGGACAGGCGCGACCGGTCCACTAGATGTCAGCCCGCCAGATGATG
GGCTGTGAGACGAGGAAGAC

Downstream 100 bases:

>100_bases
GCCCAAGCCGGACATTGGCGGACGGCCAGCCTGGATTTACAGTCGCCCAAAACGCAATTCTGGGCTATTCAGGCGTTGAC
GCCTTCCCTCCAGACCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAQNIYDQPDFFAGYSQLGRSIEGLDGAAEWPALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLAR
ARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDA
EGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCPTDAQITARPELAEELDRPMFLLVSA
RR

Sequences:

>Translated_242_residues
MAQNIYDQPDFFAGYSQLGRSIEGLDGAAEWPALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLAR
ARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDA
EGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCPTDAQITARPELAEELDRPMFLLVSA
RR
>Mature_241_residues
AQNIYDQPDFFAGYSQLGRSIEGLDGAAEWPALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARA
RAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAE
GRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCPTDAQITARPELAEELDRPMFLLVSAR
R

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786994, Length=112, Percent_Identity=36.6071428571429, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27046; Mature: 26915

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNIYDQPDFFAGYSQLGRSIEGLDGAAEWPALRAMLPEVGGLRIVDLGCGFGWFCRWA
CCCCCCCCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
HEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE
HHCCCEEEEECCCHHHHHHHHHCCCCCCCCEEECCCCCHHCCCCCHHHHHHHHHHHHHHH
DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTD
HHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCEEECCCCCCCCHHHHHHCCCCCHH
WLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCPTDAQITARPELAEELDRPMFLLVSA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHHHHCCCEEEEEEC
RR
CC
>Mature Secondary Structure 
AQNIYDQPDFFAGYSQLGRSIEGLDGAAEWPALRAMLPEVGGLRIVDLGCGFGWFCRWA
CCCCCCCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
HEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE
HHCCCEEEEECCCHHHHHHHHHCCCCCCCCEEECCCCCHHCCCCCHHHHHHHHHHHHHHH
DVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTD
HHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCCCEEECCCCCCCCHHHHHHCCCCCHH
WLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCPTDAQITARPELAEELDRPMFLLVSA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHHHHCCCEEEEEEC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]