| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473346
Identifier: 13473346
GI number: 13473346
Start: 3137629
End: 3138399
Strand: Reverse
Name: 13473346
Synonym: mll3907
Alternate gene names: NA
Gene position: 3138399-3137629 (Counterclockwise)
Preceding gene: 13473347
Following gene: 13473344
Centisome position: 44.6
GC content: 66.8
Gene sequence:
>771_bases ATGTCAGGCCTGCTTCTCGATCCGTGGTTTTACGCGGCCGCCATTCCGGCGGTCATTCTGGTCGGCCTGTCCAAGGGCGG GTTTGGCGGCGCTGTCGGTTTCGTCGGCGTGCCGCTGATGGCGCTGACCATGCCGCCGGTGCAGGCGGCCGCCATCCTGC TGCCGATCCTGTGCCTGATGGACATCGTCTCGGTTTGGACGTGGTGGGGCGTGTATGACCGCAAGATGCTGGTCGACATG ATGCCGGGCGCCGTCATCGGAATCGGCCTCGGCTGGCTGACGGCGGCCTTGGTGACCGAGGAGGCGGTGCGGCTGATCGT CGGCGCCGTCGCCATCATCTTCGTGCTGCGCTGGCTTTATCTGCAGTTCCGCCATGGCGCCGACCATGCCGCCGAACCCA ACCGCGTGGCTGCCGCGATCTGGGGGACGGTCGCCGGCTTCACCAGCTTCGTCGCCCATGTCGGTGGCCCGCCCTTCCAG GTCTATGCGCTGCCGATCCGGCTCGACCCCAAGGTGCTGTCGGGCACGGCCGCGATCTTCTTTGCCGCGACCAATGCGTT GAAGCTCGTCCCCTATTTCGCGCTCGGCCAGTTCGACACCGCCAACCTGACGGCGTCGGCCGTGCTGATGCCGCTGGCGC CGCTGTCGACCATCGCCGGCGCCTGGCTGGTGCGGCGCATGCGGCCTGAGATCTTTTATCCCTTTACCTACGCGACCGTG GCCGTCGTGGCGCTGAAGCTTTTGTGGGATGGCGTTGCCGGCCTGATGTAG
Upstream 100 bases:
>100_bases CCGGACATTGGCGGACGGCCAGCCTGGATTTACAGTCGCCCAAAACGCAATTCTGGGCTATTCAGGCGTTGACGCCTTCC CTCCAGACCAGTCCCTCCCC
Downstream 100 bases:
>100_bases CAAGCCGGCGGCTTTGCTGCCGAGCGCAGTTCACCACCAGCGTCAGGCGGCGCTTTCCACGAGCCGGCGGCTTCCGCCGA AGGCCAGCGTGGCGCCTACC
Product: putative integral membrane protein
Products: NA
Alternate protein names: Conserved Domain Protein; Transmembrane Protein; Permease; DUF81 Family Membrane Protein
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSGLLLDPWFYAAAIPAVILVGLSKGGFGGAVGFVGVPLMALTMPPVQAAAILLPILCLMDIVSVWTWWGVYDRKMLVDM MPGAVIGIGLGWLTAALVTEEAVRLIVGAVAIIFVLRWLYLQFRHGADHAAEPNRVAAAIWGTVAGFTSFVAHVGGPPFQ VYALPIRLDPKVLSGTAAIFFAATNALKLVPYFALGQFDTANLTASAVLMPLAPLSTIAGAWLVRRMRPEIFYPFTYATV AVVALKLLWDGVAGLM
Sequences:
>Translated_256_residues MSGLLLDPWFYAAAIPAVILVGLSKGGFGGAVGFVGVPLMALTMPPVQAAAILLPILCLMDIVSVWTWWGVYDRKMLVDM MPGAVIGIGLGWLTAALVTEEAVRLIVGAVAIIFVLRWLYLQFRHGADHAAEPNRVAAAIWGTVAGFTSFVAHVGGPPFQ VYALPIRLDPKVLSGTAAIFFAATNALKLVPYFALGQFDTANLTASAVLMPLAPLSTIAGAWLVRRMRPEIFYPFTYATV AVVALKLLWDGVAGLM >Mature_255_residues SGLLLDPWFYAAAIPAVILVGLSKGGFGGAVGFVGVPLMALTMPPVQAAAILLPILCLMDIVSVWTWWGVYDRKMLVDMM PGAVIGIGLGWLTAALVTEEAVRLIVGAVAIIFVLRWLYLQFRHGADHAAEPNRVAAAIWGTVAGFTSFVAHVGGPPFQV YALPIRLDPKVLSGTAAIFFAATNALKLVPYFALGQFDTANLTASAVLMPLAPLSTIAGAWLVRRMRPEIFYPFTYATVA VVALKLLWDGVAGLM
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27269; Mature: 27138
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLLLDPWFYAAAIPAVILVGLSKGGFGGAVGFVGVPLMALTMPPVQAAAILLPILCLM CCCCEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DIVSVWTWWGVYDRKMLVDMMPGAVIGIGLGWLTAALVTEEAVRLIVGAVAIIFVLRWLY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQFRHGADHAAEPNRVAAAIWGTVAGFTSFVAHVGGPPFQVYALPIRLDPKVLSGTAAIF HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHCHHHHH FAATNALKLVPYFALGQFDTANLTASAVLMPLAPLSTIAGAWLVRRMRPEIFYPFTYATV HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHH AVVALKLLWDGVAGLM HHHHHHHHHHHHHHCC >Mature Secondary Structure SGLLLDPWFYAAAIPAVILVGLSKGGFGGAVGFVGVPLMALTMPPVQAAAILLPILCLM CCCEECHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DIVSVWTWWGVYDRKMLVDMMPGAVIGIGLGWLTAALVTEEAVRLIVGAVAIIFVLRWLY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQFRHGADHAAEPNRVAAAIWGTVAGFTSFVAHVGGPPFQVYALPIRLDPKVLSGTAAIF HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHCHHHHH FAATNALKLVPYFALGQFDTANLTASAVLMPLAPLSTIAGAWLVRRMRPEIFYPFTYATV HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHH AVVALKLLWDGVAGLM HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA