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The map label for this gene is omp16

Identifier: 13473329

GI number: 13473329

Start: 3124654

End: 3125160

Strand: Reverse

Name: omp16

Synonym: mll3887

Alternate gene names: 13473329

Gene position: 3125160-3124654 (Counterclockwise)

Preceding gene: 13473330

Following gene: 13473328

Centisome position: 44.42

GC content: 65.88

Gene sequence:

>507_bases
ATGGGCCGTATCGCAGCACTTACCAGAAACCCGGTCATGATCGCGCTGGTGGCGATGCTCGCCATCGCCGGTTGCGCTTC
GAAGAAGACGCCGAACAACGCCGCCGACCTCGGCCTCAACGGCGCCGGTGCGGCAACGCCCGGCTCGGCGCAGGACTTCA
CCGTCAACATTGGCGACCGCATCTTCTTCGATACGGACTCGTCCTCGATCCGCGCCGACGCGCAGACCACACTCGCTCGC
CAGGCGCAGTGGCTGAACCAGTACAAGCAGTACGCCATCGTCGTCGAAGGTCACGCCGACGAGCGCGGCACGCGCGAATA
CAATCTGGCGCTCGGCGCCCGCCGCGCTGCCGCCGCCCGCGACTTCCTGGTTTCCAAAGGTGTCGCTTCCAGCCGTCTGA
AGACCATTTCATACGGCAAGGAACGTCCGGTCGCGGTCTGCGACGACATCTCCTGCTGGTCGCAGAATCGCCGCGCCGTC
ACCACGCTCAGCGGCGCCGGTTCCTGA

Upstream 100 bases:

>100_bases
GCCTAAACCAAATTTTAACCGTGTTTCTTGAATGCCGGTTAACCCAAACGTGGTTACTGGGTGATCAACGAAATCACTCG
AAATGCGAAGGAGAGGCGGC

Downstream 100 bases:

>100_bases
GTTGCCCGCGTCGGGAGACGCGAGCGCGCCGACTGGCAAAAATGCAACACAGCTTCGCGAAAGGCGGCCTTCGGGCCGCC
TTTTTCATATCCGGGTGCCC

Product: peptidoglycan-associated lipoprotein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGRIAALTRNPVMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQDFTVNIGDRIFFDTDSSSIRADAQTTLAR
QAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAAARDFLVSKGVASSRLKTISYGKERPVAVCDDISCWSQNRRAV
TTLSGAGS

Sequences:

>Translated_168_residues
MGRIAALTRNPVMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQDFTVNIGDRIFFDTDSSSIRADAQTTLAR
QAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAAARDFLVSKGVASSRLKTISYGKERPVAVCDDISCWSQNRRAV
TTLSGAGS
>Mature_167_residues
GRIAALTRNPVMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQDFTVNIGDRIFFDTDSSSIRADAQTTLARQ
AQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAAARDFLVSKGVASSRLKTISYGKERPVAVCDDISCWSQNRRAVT
TLSGAGS

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain

Homologues:

Organism=Escherichia coli, GI1786962, Length=162, Percent_Identity=38.2716049382716, Blast_Score=113, Evalue=6e-27,
Organism=Escherichia coli, GI48994946, Length=126, Percent_Identity=29.3650793650794, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OMP16_RHILO (Q98F85)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104896.1
- ProteinModelPortal:   Q98F85
- SMR:   Q98F85
- GeneID:   1227557
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll3887
- NMPDR:   fig|266835.1.peg.3000
- HOGENOM:   HBG751251
- OMA:   ELERQAC
- ProtClustDB:   CLSK863900
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169
- Gene3D:   G3DSA:3.30.1330.60
- PRINTS:   PR01021
- TIGRFAMs:   TIGR02802

Pfam domain/function: PF00691 OmpA; SSF103088 OmpA/MotB_C

EC number: NA

Molecular weight: Translated: 17765; Mature: 17634

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS01068 OMPA_1; PS51123 OMPA_2; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIAALTRNPVMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQDFTVNIGDR
CCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCE
IFFDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAAAR
EEEECCCCCEECHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEHHHCCHHHHHHH
DFLVSKGVASSRLKTISYGKERPVAVCDDISCWSQNRRAVTTLSGAGS
HHHHHCCCCHHHHHHHHCCCCCCEEEECCCHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
GRIAALTRNPVMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQDFTVNIGDR
CCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEECCCE
IFFDTDSSSIRADAQTTLARQAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAAAR
EEEECCCCCEECHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEHHHCCHHHHHHH
DFLVSKGVASSRLKTISYGKERPVAVCDDISCWSQNRRAVTTLSGAGS
HHHHHCCCCHHHHHHHHCCCCCCEEEECCCHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968