| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is mco [H]
Identifier: 13473095
GI number: 13473095
Start: 2889260
End: 2890768
Strand: Reverse
Name: mco [H]
Synonym: mll3586
Alternate gene names: 13473095
Gene position: 2890768-2889260 (Counterclockwise)
Preceding gene: 13473097
Following gene: 13473094
Centisome position: 41.08
GC content: 65.67
Gene sequence:
>1509_bases ATGCATCGGCGAGGTTTTCTGGCGGCAGGTCTTGCGGCGGTTCTTGTGAGCGAGCGCGCCGTTGCCCAGATGAAGATGGA CGACATGCCGGGCATGGATATGGGCGGTCACGCGGGCCACGACATGGGCGCCGCGCCGCAAGGCACGGTCGTTGTGCCCG AGGGCGAGGTGTTGCGCGAATTGCCCCTGCTGGCGAACGAAGCCAGCAGGCCGGGTCTGTTCAAGGCGACGCTGACGGCC GGGTCCGCTACGGCGCGTTTTGCGAAGGGACTGGACACGCCGATCCTCGCTTACAACGGCACCAGCCCCGGGCCGCTGAT CGAGGCAGTCGAGGGCGACCGCGTCGAAATCACCTTCGCCAACCGGATCGCGAACGAGGCAAGCACCATCCACTGGCACG GCATGCCGGTGCCGGCCGATCAGGACGGCAACCCAATGGACCCGGTCGCCACCGGCACCGATCGTACCTACAGTTTCGAT CTGCCGGAAGCCAGCGCCGGCTCTTATTGGTATCACCCGCATCCGCACGGCAAGACCGCCGAGCAGGTCTATCGTGGCCT TGCCGGCGCGTTCGTGGTTAAGCCGAAGGCCGATCCGATCCCGGCCGCCTATGGCGATACCGTGCTGGTGTTCACCGACC TGCGCCTTGCGGCCGATGGCACCTTGCCCGACAACACGATGACGGACCTGATGAACGGGCGCGTCGGCGACCATGTGCTG GTCAACGGCCAAAAGAATCCCACACTGACGGTGCCCTTTGGCGCGAAGCGGCGCTTCCGGTTCTACAATGCGACCAACGC GCGCTTTCTGCGGCTCTCCTTCGACGGCGCGTCGATGACAATCATCGGAACGGATGGCGGTCTGCTAGAAGCCCCGGTCG CGGCCGGCGACATCCTGCTCAGCCCGGCGGAACGGCTTGAACTGGTCGTCTCGTTCGATAAGCCCGGCGCGGCCGCGCTT ACGACGCTCGACTATGACCGCGGCTGGATGGGTCCCGGGCGACCAGCCGATGCCGGACTGACGCTGCTGACGGTCAATGT TTCGCAGACCGAGGCGGACCCTGTTCCGCCACTGCCCGACAGGCTGCGGCCGATCGCACAACTCGGCGCCCCGGCCGTCA GCCGCCGCTTCGTCTTCACCGAAACCATGGCCATGAACGCCAGCGGCATGGAGATGGGCTTCCTGATCAACGGCGCCGCC TTCGACATGCAGCGCATCGACGTCGTCGCCAAGGCTGGGCAGGTCGAACTCTGGGAGATCGTCAACGAGGCGGACATGGA TCATCCATTCCATGTGCACGGGACGCAGTTCCAGGTGGTCGAGCACGAACGCGGCGGCAACATATCAAAGCCGGCCTATC GCGCCTGGAAAGACACCGTCAATGTCGCGCGCGGGGAGGCGGTGCGGCTGCTGCTTCGGCAGGACCGGCCGGGGCCGAGG ATGTATCACTGCCACATCCTCGAGCACGAGCAGCTCGGCATGATGGGCGTAGTCGACGTGCAGGCATAG
Upstream 100 bases:
>100_bases GAACCGATCAGGCGGCCCAAACGCCGCATTGACCTGGCCGGCCATCGGCAGTCTCCTAGGGGCGCCCTTGGTGTTCAACG CCTGATCGAGGAAATGACAG
Downstream 100 bases:
>100_bases TCCGGCGTGGTGGCGCTCTATGGCGCATTGTTCATCAGTGCCTTCCTCGCCGCAACCGTCCTGCCGGTTTCGTCGGAGGC TGTGCTCGCTGGCATGATCG
Product: putative periplasmic oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MHRRGFLAAGLAAVLVSERAVAQMKMDDMPGMDMGGHAGHDMGAAPQGTVVVPEGEVLRELPLLANEASRPGLFKATLTA GSATARFAKGLDTPILAYNGTSPGPLIEAVEGDRVEITFANRIANEASTIHWHGMPVPADQDGNPMDPVATGTDRTYSFD LPEASAGSYWYHPHPHGKTAEQVYRGLAGAFVVKPKADPIPAAYGDTVLVFTDLRLAADGTLPDNTMTDLMNGRVGDHVL VNGQKNPTLTVPFGAKRRFRFYNATNARFLRLSFDGASMTIIGTDGGLLEAPVAAGDILLSPAERLELVVSFDKPGAAAL TTLDYDRGWMGPGRPADAGLTLLTVNVSQTEADPVPPLPDRLRPIAQLGAPAVSRRFVFTETMAMNASGMEMGFLINGAA FDMQRIDVVAKAGQVELWEIVNEADMDHPFHVHGTQFQVVEHERGGNISKPAYRAWKDTVNVARGEAVRLLLRQDRPGPR MYHCHILEHEQLGMMGVVDVQA
Sequences:
>Translated_502_residues MHRRGFLAAGLAAVLVSERAVAQMKMDDMPGMDMGGHAGHDMGAAPQGTVVVPEGEVLRELPLLANEASRPGLFKATLTA GSATARFAKGLDTPILAYNGTSPGPLIEAVEGDRVEITFANRIANEASTIHWHGMPVPADQDGNPMDPVATGTDRTYSFD LPEASAGSYWYHPHPHGKTAEQVYRGLAGAFVVKPKADPIPAAYGDTVLVFTDLRLAADGTLPDNTMTDLMNGRVGDHVL VNGQKNPTLTVPFGAKRRFRFYNATNARFLRLSFDGASMTIIGTDGGLLEAPVAAGDILLSPAERLELVVSFDKPGAAAL TTLDYDRGWMGPGRPADAGLTLLTVNVSQTEADPVPPLPDRLRPIAQLGAPAVSRRFVFTETMAMNASGMEMGFLINGAA FDMQRIDVVAKAGQVELWEIVNEADMDHPFHVHGTQFQVVEHERGGNISKPAYRAWKDTVNVARGEAVRLLLRQDRPGPR MYHCHILEHEQLGMMGVVDVQA >Mature_502_residues MHRRGFLAAGLAAVLVSERAVAQMKMDDMPGMDMGGHAGHDMGAAPQGTVVVPEGEVLRELPLLANEASRPGLFKATLTA GSATARFAKGLDTPILAYNGTSPGPLIEAVEGDRVEITFANRIANEASTIHWHGMPVPADQDGNPMDPVATGTDRTYSFD LPEASAGSYWYHPHPHGKTAEQVYRGLAGAFVVKPKADPIPAAYGDTVLVFTDLRLAADGTLPDNTMTDLMNGRVGDHVL VNGQKNPTLTVPFGAKRRFRFYNATNARFLRLSFDGASMTIIGTDGGLLEAPVAAGDILLSPAERLELVVSFDKPGAAAL TTLDYDRGWMGPGRPADAGLTLLTVNVSQTEADPVPPLPDRLRPIAQLGAPAVSRRFVFTETMAMNASGMEMGFLINGAA FDMQRIDVVAKAGQVELWEIVNEADMDHPFHVHGTQFQVVEHERGGNISKPAYRAWKDTVNVARGEAVRLLLRQDRPGPR MYHCHILEHEQLGMMGVVDVQA
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=487, Percent_Identity=30.8008213552361, Blast_Score=179, Evalue=5e-46, Organism=Escherichia coli, GI1789394, Length=474, Percent_Identity=31.0126582278481, Blast_Score=153, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323703, Length=476, Percent_Identity=24.1596638655462, Blast_Score=87, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6321067, Length=263, Percent_Identity=24.3346007604563, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI18859919, Length=257, Percent_Identity=31.1284046692607, Blast_Score=89, Evalue=9e-18,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 53996; Mature: 53996
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRRGFLAAGLAAVLVSERAVAQMKMDDMPGMDMGGHAGHDMGAAPQGTVVVPEGEVLRE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHH LPLLANEASRPGLFKATLTAGSATARFAKGLDTPILAYNGTSPGPLIEAVEGDRVEITFA CCHHHCCCCCCCEEEEEEECCCHHHHHHCCCCCCEEEECCCCCCCEEEECCCCEEEEEEH NRIANEASTIHWHGMPVPADQDGNPMDPVATGTDRTYSFDLPEASAGSYWYHPHPHGKTA HHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCH EQVYRGLAGAFVVKPKADPIPAAYGDTVLVFTDLRLAADGTLPDNTMTDLMNGRVGDHVL HHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHCCCCCCEEE VNGQKNPTLTVPFGAKRRFRFYNATNARFLRLSFDGASMTIIGTDGGLLEAPVAAGDILL ECCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCEEE SPAERLELVVSFDKPGAAALTTLDYDRGWMGPGRPADAGLTLLTVNVSQTEADPVPPLPD CCHHHEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH RLRPIAQLGAPAVSRRFVFTETMAMNASGMEMGFLINGAAFDMQRIDVVAKAGQVELWEI HHHHHHHHCCCHHHCEEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEHHH VNEADMDHPFHVHGTQFQVVEHERGGNISKPAYRAWKDTVNVARGEAVRLLLRQDRPGPR HHHCCCCCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCCC MYHCHILEHEQLGMMGVVDVQA EEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure MHRRGFLAAGLAAVLVSERAVAQMKMDDMPGMDMGGHAGHDMGAAPQGTVVVPEGEVLRE CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHH LPLLANEASRPGLFKATLTAGSATARFAKGLDTPILAYNGTSPGPLIEAVEGDRVEITFA CCHHHCCCCCCCEEEEEEECCCHHHHHHCCCCCCEEEECCCCCCCEEEECCCCEEEEEEH NRIANEASTIHWHGMPVPADQDGNPMDPVATGTDRTYSFDLPEASAGSYWYHPHPHGKTA HHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCH EQVYRGLAGAFVVKPKADPIPAAYGDTVLVFTDLRLAADGTLPDNTMTDLMNGRVGDHVL HHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHCCCCCCEEE VNGQKNPTLTVPFGAKRRFRFYNATNARFLRLSFDGASMTIIGTDGGLLEAPVAAGDILL ECCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCEEE SPAERLELVVSFDKPGAAALTTLDYDRGWMGPGRPADAGLTLLTVNVSQTEADPVPPLPD CCHHHEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH RLRPIAQLGAPAVSRRFVFTETMAMNASGMEMGFLINGAAFDMQRIDVVAKAGQVELWEI HHHHHHHHCCCHHHCEEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEHHH VNEADMDHPFHVHGTQFQVVEHERGGNISKPAYRAWKDTVNVARGEAVRLLLRQDRPGPR HHHCCCCCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCCC MYHCHILEHEQLGMMGVVDVQA EEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]