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The map label for this gene is yqaA [H]

Identifier: 13473094

GI number: 13473094

Start: 2888819

End: 2889253

Strand: Reverse

Name: yqaA [H]

Synonym: mll3585

Alternate gene names: 13473094

Gene position: 2889253-2888819 (Counterclockwise)

Preceding gene: 13473095

Following gene: 13473090

Centisome position: 41.06

GC content: 64.6

Gene sequence:

>435_bases
GTGGTGGCGCTCTATGGCGCATTGTTCATCAGTGCCTTCCTCGCCGCAACCGTCCTGCCGGTTTCGTCGGAGGCTGTGCT
CGCTGGCATGATCGTCTCCGGCCGCGGTGACCCTTGGCTGCTCCTTACCGTCGCCACGATCGGCAACACGCTCGGCTCCG
TGGTGAACTGGGTTCTGGGGCGTGGCATTGACGGGCTGCGCAACAGGCGCTGGTTTCCAGTCACTGCCGATCGCTATGAG
CAGGCATGCCGAACGTTCCGTCGCTTTGGCGAATGGACGCTGTTGTTTGCCTGGCTGCCGGTCGTCGGAGATGCTCTTAC
CCTTGCCGCGGGCGCCGCACGCGTGAACCTAGCGGTGTTCGTCGCTCTTGTCGCGACAGGCAAGGCCGCACGCTATGCGG
TGATCGTCGCGGGAGGATTGTGGGCGACGGCGTGA

Upstream 100 bases:

>100_bases
TCGGCAGGACCGGCCGGGGCCGAGGATGTATCACTGCCACATCCTCGAGCACGAGCAGCTCGGCATGATGGGCGTAGTCG
ACGTGCAGGCATAGTCCGGC

Downstream 100 bases:

>100_bases
GCCATCGTCCACATCGTCGACCGCAAGCAGCATTTTCATTCGCGCGGGGCCGTTCTTGGCCGGCCGAAGACCATGCTTCG
CATGACGCCATCGCGCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVALYGALFISAFLAATVLPVSSEAVLAGMIVSGRGDPWLLLTVATIGNTLGSVVNWVLGRGIDGLRNRRWFPVTADRYE
QACRTFRRFGEWTLLFAWLPVVGDALTLAAGAARVNLAVFVALVATGKAARYAVIVAGGLWATA

Sequences:

>Translated_144_residues
MVALYGALFISAFLAATVLPVSSEAVLAGMIVSGRGDPWLLLTVATIGNTLGSVVNWVLGRGIDGLRNRRWFPVTADRYE
QACRTFRRFGEWTLLFAWLPVVGDALTLAAGAARVNLAVFVALVATGKAARYAVIVAGGLWATA
>Mature_144_residues
MVALYGALFISAFLAATVLPVSSEAVLAGMIVSGRGDPWLLLTVATIGNTLGSVVNWVLGRGIDGLRNRRWFPVTADRYE
QACRTFRRFGEWTLLFAWLPVVGDALTLAAGAARVNLAVFVALVATGKAARYAVIVAGGLWATA

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=131, Percent_Identity=41.9847328244275, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 15267; Mature: 15267

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALYGALFISAFLAATVLPVSSEAVLAGMIVSGRGDPWLLLTVATIGNTLGSVVNWVLG
CEEHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHH
RGIDGLRNRRWFPVTADRYEQACRTFRRFGEWTLLFAWLPVVGDALTLAAGAARVNLAVF
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALVATGKAARYAVIVAGGLWATA
HHHHHCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MVALYGALFISAFLAATVLPVSSEAVLAGMIVSGRGDPWLLLTVATIGNTLGSVVNWVLG
CEEHHHHHHHHHHHHHHHCCCCCCHHHEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHH
RGIDGLRNRRWFPVTADRYEQACRTFRRFGEWTLLFAWLPVVGDALTLAAGAARVNLAVF
CCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALVATGKAARYAVIVAGGLWATA
HHHHHCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]