Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472920

Identifier: 13472920

GI number: 13472920

Start: 2707702

End: 2708091

Strand: Direct

Name: 13472920

Synonym: mlr3368

Alternate gene names: NA

Gene position: 2707702-2708091 (Clockwise)

Preceding gene: 13472919

Following gene: 13472922

Centisome position: 38.48

GC content: 62.05

Gene sequence:

>390_bases
ATGTCCAGTTTTCGCCTCGCCTTCCTGATTGCCGCAACCTCGTCGATCGGCCCCTTGCCGGCATTCGCCGCGGCTCAGAG
CAGCTATGTCTATTGCGACAATGGGCTGCGCTGCTTCAAGGCTCCCTGCCCGTCGAACAGCGCGCTCGACCTTGCCACCG
GCAAGATCGTCAAGGGCGTGTCGATCGACGCCAGCCAACTGCCGCAGGCCGACAAAGCGATAACGGACCAGTCCGACGTG
CTCTACAGCGGCAAGATCGTCGTCAGGGGCTCGATCGAGCAGCGTACCCAGAGCATCACAGGCAAGGACTATAGCCTGCC
ATGGCTGGTCGCGACCCGTATCGTACGCACCGCCAAGGACAGCGAACGCAAGCACTGTTCATCGCCCTGA

Upstream 100 bases:

>100_bases
AATCTGCGCAATCCGGAAGCGGTCGATCACTACCGGCAGCGCTTTCCGCTCGACCTATAGCAATCGCGGTTTCGCCCCAA
TTCTCCGCGACGTTGCAGCC

Downstream 100 bases:

>100_bases
TCCGCGATTGCGATTCACGACTGGTCAGCCACCAAGCAGCCGTTCCACTTCGGCGGCTATCCGCAGCAGACGCCGGTCAT
GGCCGTTGCGCGCCACCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGVSIDASQLPQADKAITDQSDV
LYSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKDSERKHCSSP

Sequences:

>Translated_129_residues
MSSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGVSIDASQLPQADKAITDQSDV
LYSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKDSERKHCSSP
>Mature_128_residues
SSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGVSIDASQLPQADKAITDQSDVL
YSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKDSERKHCSSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13785; Mature: 13654

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGV
CCCCEEEEEEEECCCCCCCCCHHHCCCCEEEECCCCEEEECCCCCCCCEECCCCCEEECC
SIDASQLPQADKAITDQSDVLYSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKD
CCCHHHCCCCCHHCCCCCCEEEECEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
SERKHCSSP
CCCCCCCCC
>Mature Secondary Structure 
SSFRLAFLIAATSSIGPLPAFAAAQSSYVYCDNGLRCFKAPCPSNSALDLATGKIVKGV
CCCEEEEEEEECCCCCCCCCHHHCCCCEEEECCCCEEEECCCCCCCCEECCCCCEEECC
SIDASQLPQADKAITDQSDVLYSGKIVVRGSIEQRTQSITGKDYSLPWLVATRIVRTAKD
CCCHHHCCCCCHHCCCCCCEEEECEEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
SERKHCSSP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA