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The map label for this gene is yjjM [H]

Identifier: 13472891

GI number: 13472891

Start: 2679122

End: 2679880

Strand: Reverse

Name: yjjM [H]

Synonym: mll3328

Alternate gene names: 13472891

Gene position: 2679880-2679122 (Counterclockwise)

Preceding gene: 13472898

Following gene: 13472890

Centisome position: 38.09

GC content: 63.77

Gene sequence:

>759_bases
ATGGAGGAAACCGGGCTGATCGCCTGGAACAAGCGCGCCAAGACGGTGCTTCGCGACCCGCGTCCCGACGATTTCTTCCC
CGAGGAAGAGACCGACACACTGGCCGAGATCATCGAGCGGTCGTTCATGCGGCGCCTGCTCGCCGGCGGCGCCGAGGCCG
GCATGCAAATCAACGAACTCGAACTGGCGCGCGAGATCGGCGTTGGCACCACCAGCGTGCGCGAGTTCCTGATCCGCTTC
TCGCGCTTCGGCCTGATAGAGAAGCGCCGCAACAGCCATTGGGTGCTGAAGGGTTTTACGCGGGCTTTCGCGCTCGAACT
GACCGAGATCCGCGAGATGTTCGAACTGCGTTCGGCGGCTGCCTTCGCCGCGCTGCCGCAGGACAGCCCGGTCTGGGCCG
ATCTCGACCGCCTGGAGGACGAACATCGTCTGCTGGCGCGAGAGATCGCCACGCGCTTCAACGCGTTTTCCGAGCTGGAC
GAGCGCTTCCACCGGCTCATCCACCGGGCCTCGCACAACCGTTTCATCGTCGATTTCTACGACGTCATCGCCATGATCTT
CCATTACCACTACCAGTGGAACAAGGCGCAGGAGCGCGAGCGCAACGAAGTCGCGGTCGGCGAGCACCTTGCCTATATCG
AGGCGCTCAAATCGCGCGACCTCGGCAAGGTCGACGCCGCCTGCCGCAAGCACCTGAAATCGGCGCGCCACACGCTGTTG
ACCTCCATCCCCGAAAGCCGGCCCTTGCTGAAATCCTGA

Upstream 100 bases:

>100_bases
CCTCAGGCTGCTCGACGAAACGCGCAGCCTGCCGTCGGAACCGGAATTGGGCACGCTGCTCGGCGTCAGCCGCACGACCG
TGCGCAGCATCCTGGCGCGC

Downstream 100 bases:

>100_bases
TCGCGCCGCGTTGCCGCAGCATCGAATTGGCGATTTTCGACCTGCCGCCGCCATGATAGGTATCCTTCCAGGAATTGCTT
GAAGAGGCAGATGGCTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MEETGLIAWNKRAKTVLRDPRPDDFFPEEETDTLAEIIERSFMRRLLAGGAEAGMQINELELAREIGVGTTSVREFLIRF
SRFGLIEKRRNSHWVLKGFTRAFALELTEIREMFELRSAAAFAALPQDSPVWADLDRLEDEHRLLAREIATRFNAFSELD
ERFHRLIHRASHNRFIVDFYDVIAMIFHYHYQWNKAQERERNEVAVGEHLAYIEALKSRDLGKVDAACRKHLKSARHTLL
TSIPESRPLLKS

Sequences:

>Translated_252_residues
MEETGLIAWNKRAKTVLRDPRPDDFFPEEETDTLAEIIERSFMRRLLAGGAEAGMQINELELAREIGVGTTSVREFLIRF
SRFGLIEKRRNSHWVLKGFTRAFALELTEIREMFELRSAAAFAALPQDSPVWADLDRLEDEHRLLAREIATRFNAFSELD
ERFHRLIHRASHNRFIVDFYDVIAMIFHYHYQWNKAQERERNEVAVGEHLAYIEALKSRDLGKVDAACRKHLKSARHTLL
TSIPESRPLLKS
>Mature_252_residues
MEETGLIAWNKRAKTVLRDPRPDDFFPEEETDTLAEIIERSFMRRLLAGGAEAGMQINELELAREIGVGTTSVREFLIRF
SRFGLIEKRRNSHWVLKGFTRAFALELTEIREMFELRSAAAFAALPQDSPVWADLDRLEDEHRLLAREIATRFNAFSELD
ERFHRLIHRASHNRFIVDFYDVIAMIFHYHYQWNKAQERERNEVAVGEHLAYIEALKSRDLGKVDAACRKHLKSARHTLL
TSIPESRPLLKS

Specific function: May be a positive transcriptional regulator for yjjM and/or yjjN. Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48995005, Length=249, Percent_Identity=34.136546184739, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 29406; Mature: 29406

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETGLIAWNKRAKTVLRDPRPDDFFPEEETDTLAEIIERSFMRRLLAGGAEAGMQINEL
CCCCCCEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
ELAREIGVGTTSVREFLIRFSRFGLIEKRRNSHWVLKGFTRAFALELTEIREMFELRSAA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAALPQDSPVWADLDRLEDEHRLLAREIATRFNAFSELDERFHRLIHRASHNRFIVDFY
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHH
DVIAMIFHYHYQWNKAQERERNEVAVGEHLAYIEALKSRDLGKVDAACRKHLKSARHTLL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TSIPESRPLLKS
HHCCCCCCCCCC
>Mature Secondary Structure
MEETGLIAWNKRAKTVLRDPRPDDFFPEEETDTLAEIIERSFMRRLLAGGAEAGMQINEL
CCCCCCEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHH
ELAREIGVGTTSVREFLIRFSRFGLIEKRRNSHWVLKGFTRAFALELTEIREMFELRSAA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAALPQDSPVWADLDRLEDEHRLLAREIATRFNAFSELDERFHRLIHRASHNRFIVDFY
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHH
DVIAMIFHYHYQWNKAQERERNEVAVGEHLAYIEALKSRDLGKVDAACRKHLKSARHTLL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
TSIPESRPLLKS
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]