| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472890
Identifier: 13472890
GI number: 13472890
Start: 2678643
End: 2678999
Strand: Reverse
Name: 13472890
Synonym: mll3327
Alternate gene names: NA
Gene position: 2678999-2678643 (Counterclockwise)
Preceding gene: 13472891
Following gene: 13472889
Centisome position: 38.08
GC content: 67.51
Gene sequence:
>357_bases ATGCCGACCGCGTTTGTCGCGGCCTGCCTGCTGCTGCTCCAGTCGACGCTCGGCGCCTTCGCCTTTGCTACCGGGCCGAA TGCCGCGCAACTCGACGCCTTCGGCAATGTCATCTGTACCCGCGACGGCGCCACCCAGCTTCCCGGCGGTGACCAGCACC CGTCCCATCTGCCGGCCTGCTGCATGCTTGGCTGCAGCATGTTTTCATCCGCCTTTGCGCCGCTGCCCGATGCCGGGCTG GCCCTGGCCAGCCTTTCCTTTGAAGCGGTCGCGTTCGTTTTTCCCGCGAGCATTCATCTCGACTTCGCGCGCGAACGCTC GCCGTCGAACCCCCGCGCGCCGCCACTTGCGGCCTGA
Upstream 100 bases:
>100_bases CGAATTGGCGATTTTCGACCTGCCGCCGCCATGATAGGTATCCTTCCAGGAATTGCTTGAAGAGGCAGATGGCTTGAACC GCCGGGGGAGACGCTGGAGC
Downstream 100 bases:
>100_bases GCTTGCTTGCCCGGCGGAACCTTTCGCGGGCGCACCCATCCAACGACCAAACGGCTCGCGACCGGCGACGGCGCGATCAT CACTTCATGGAGCAACCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MPTAFVAACLLLLQSTLGAFAFATGPNAAQLDAFGNVICTRDGATQLPGGDQHPSHLPACCMLGCSMFSSAFAPLPDAGL ALASLSFEAVAFVFPASIHLDFARERSPSNPRAPPLAA
Sequences:
>Translated_118_residues MPTAFVAACLLLLQSTLGAFAFATGPNAAQLDAFGNVICTRDGATQLPGGDQHPSHLPACCMLGCSMFSSAFAPLPDAGL ALASLSFEAVAFVFPASIHLDFARERSPSNPRAPPLAA >Mature_117_residues PTAFVAACLLLLQSTLGAFAFATGPNAAQLDAFGNVICTRDGATQLPGGDQHPSHLPACCMLGCSMFSSAFAPLPDAGLA LASLSFEAVAFVFPASIHLDFARERSPSNPRAPPLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12077; Mature: 11946
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAFVAACLLLLQSTLGAFAFATGPNAAQLDAFGNVICTRDGATQLPGGDQHPSHLPAC CCHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHH CMLGCSMFSSAFAPLPDAGLALASLSFEAVAFVFPASIHLDFARERSPSNPRAPPLAA HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCCCCCCCC >Mature Secondary Structure PTAFVAACLLLLQSTLGAFAFATGPNAAQLDAFGNVICTRDGATQLPGGDQHPSHLPAC CHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHH CMLGCSMFSSAFAPLPDAGLALASLSFEAVAFVFPASIHLDFARERSPSNPRAPPLAA HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA