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The map label for this gene is ydiF [H]

Identifier: 13472677

GI number: 13472677

Start: 2452103

End: 2453704

Strand: Direct

Name: ydiF [H]

Synonym: mlr3047

Alternate gene names: 13472677

Gene position: 2452103-2453704 (Clockwise)

Preceding gene: 13472676

Following gene: 13472678

Centisome position: 34.85

GC content: 65.04

Gene sequence:

>1602_bases
GTGAGCAAGGTCGTTTCAGCGGCACAGGCAGCCGGCCTGATCAAGGACGGCATGACGGTATCTGTCTCGTCGTCGAGCGG
CCTTGGCTGTCCGGACGCGGTGCTGGCCGCCATCGGCGAACGTTTCGACATGGAAGGCCATCCCAAGAACATCACCACGA
TGCACCCGATCGCCGCCGGCGACATGTACGGCATCAAGGGCATCGATCATCTGGCCAAGCCGGGCCTGTTGAAGCGCACG
CTGTGCGGTTCCTATCCGTCCGGCCCCTCCTCCGCCGAGCCGCCGCAGATCTGGAAGATGATCGGCGACAATTCGGTCGC
CGCCTACAACGTGCCGTCCGGTATCCTGTTCGACATGCACCGCGAGGCCGCCGCCAAACGGCCGGGCGTGCTGACCAAGG
TCGGTCTCGACACGTTTGCCGACCCGCGCCATCAGGGCTGCGCCATGAACGCGGCCGCCAGCGAGCCGATCGTCTCAGTG
CAGCAGTTCGATGGCGAGGAATGGCTCTATTTCCGCTCGATCGTGCCTCACGTCTCGATCATCCGCGCCACCACATCAGA
CGAGCGCGGCAATCTCACCTATGAGCATGAGGGCGCCTATCTCGGCGGCCTCGAACAGGCGCTCGCCGCACGCAACAATG
GCGGCATCGTCATCGCGCAGGTCAAGCGCGTCGTCGAGAACGGCACGCTGAAGCCGCATGATGTGCGTGTGCCGGGCGTG
CTGGTCGACCATATCGTGGTGGCTCCCGACCAGTTGCAGACGACGCTGACGCCTTACGACCCGGCGATTTCGGGCGAGAT
CTTCCGGCCGCTGTCGACCTTCCGCAATGCCGAGATGAACGTGCAGAAGGTGATTGCGCGCCGCGTCGCCATGGAGCTGC
GCGACGGCATGGCCGTCAACATCGGCTTCGGCATCTCGGCCAATGTGCCGCGCATCCTCCTGGAAGAAGGCCAGCACGGC
AAGGTCACCTGGGTGATCGAACAGGGTGCCGTCGGCGGCGTGCCGCTGCTTGACTTCAAGTTCGGCTGCGCCTCCAACGC
CGAGGCGATCATGCCCTCGCCGCACCAGTTCATCTATTTCCAGGCCGGCGGCTTCGACGCTTCGCTGCTGTCTTTCCTGC
AGATCGACCGCCACGGCTCGGTCAACGTGTCGAAACTGTCGGCGCGGCCGCATGTCACCGCCGGCGCCGGCGGTTTTGTC
GACATTACCGCGCGGGCGAAGAAGATCGTCTTCTCCGGCTTCTTCAATGCCGGGGCAAAACTCTCCCTGGCCGATGGCGG
CATCCGCATCGACCAGGAAGGCAAGGTCAAGAAGGTGGTCAACGAGGTCGAGCACATCTCCTTCTCCGGCAAGCGCGCGG
TCGCGCAGGGGCAGGACATCACCTATGTCACCGAGCGCTGCGTGATGAAGCTGACACCCGACGGGCTGATGGTGATGGAA
CTGGCGCCGGGCATCGACCTCGAGCGCGATGTGCTGGCGCAGGCCGAGATGCCGCTCGGTGTCGCCAACGACCTCAAGGT
GACGCCGGCGGCGCTCTACCAGGATCGGCCGATCGGCCTGTCGCTCAATGGCGGCGCCTCGCTCGGAGGCGCGCATGGCT
GA

Upstream 100 bases:

>100_bases
GCGAGGACGGCATCTGGTCGCTGGCATCGGCCGAGGCGGCATTGCAATCGGCCAGTTCCGGCAAGGCCGTCAAGATCGAC
CCGAAACTCGGGAGCATGAA

Downstream 100 bases:

>100_bases
GCCTCTCGTCACCTTCGAAAGCGAGGGCGCCATCGGCATTGTCACCTTGCGCCGCCCGGAAAAGTTCAACGCGCTGGACA
TCCCGATGCTGCGCGCGCTC

Product: Acetyl-CoA:acetoacetyl-CoA transferase a subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MSKVVSAAQAAGLIKDGMTVSVSSSSGLGCPDAVLAAIGERFDMEGHPKNITTMHPIAAGDMYGIKGIDHLAKPGLLKRT
LCGSYPSGPSSAEPPQIWKMIGDNSVAAYNVPSGILFDMHREAAAKRPGVLTKVGLDTFADPRHQGCAMNAAASEPIVSV
QQFDGEEWLYFRSIVPHVSIIRATTSDERGNLTYEHEGAYLGGLEQALAARNNGGIVIAQVKRVVENGTLKPHDVRVPGV
LVDHIVVAPDQLQTTLTPYDPAISGEIFRPLSTFRNAEMNVQKVIARRVAMELRDGMAVNIGFGISANVPRILLEEGQHG
KVTWVIEQGAVGGVPLLDFKFGCASNAEAIMPSPHQFIYFQAGGFDASLLSFLQIDRHGSVNVSKLSARPHVTAGAGGFV
DITARAKKIVFSGFFNAGAKLSLADGGIRIDQEGKVKKVVNEVEHISFSGKRAVAQGQDITYVTERCVMKLTPDGLMVME
LAPGIDLERDVLAQAEMPLGVANDLKVTPAALYQDRPIGLSLNGGASLGGAHG

Sequences:

>Translated_533_residues
MSKVVSAAQAAGLIKDGMTVSVSSSSGLGCPDAVLAAIGERFDMEGHPKNITTMHPIAAGDMYGIKGIDHLAKPGLLKRT
LCGSYPSGPSSAEPPQIWKMIGDNSVAAYNVPSGILFDMHREAAAKRPGVLTKVGLDTFADPRHQGCAMNAAASEPIVSV
QQFDGEEWLYFRSIVPHVSIIRATTSDERGNLTYEHEGAYLGGLEQALAARNNGGIVIAQVKRVVENGTLKPHDVRVPGV
LVDHIVVAPDQLQTTLTPYDPAISGEIFRPLSTFRNAEMNVQKVIARRVAMELRDGMAVNIGFGISANVPRILLEEGQHG
KVTWVIEQGAVGGVPLLDFKFGCASNAEAIMPSPHQFIYFQAGGFDASLLSFLQIDRHGSVNVSKLSARPHVTAGAGGFV
DITARAKKIVFSGFFNAGAKLSLADGGIRIDQEGKVKKVVNEVEHISFSGKRAVAQGQDITYVTERCVMKLTPDGLMVME
LAPGIDLERDVLAQAEMPLGVANDLKVTPAALYQDRPIGLSLNGGASLGGAHG
>Mature_532_residues
SKVVSAAQAAGLIKDGMTVSVSSSSGLGCPDAVLAAIGERFDMEGHPKNITTMHPIAAGDMYGIKGIDHLAKPGLLKRTL
CGSYPSGPSSAEPPQIWKMIGDNSVAAYNVPSGILFDMHREAAAKRPGVLTKVGLDTFADPRHQGCAMNAAASEPIVSVQ
QFDGEEWLYFRSIVPHVSIIRATTSDERGNLTYEHEGAYLGGLEQALAARNNGGIVIAQVKRVVENGTLKPHDVRVPGVL
VDHIVVAPDQLQTTLTPYDPAISGEIFRPLSTFRNAEMNVQKVIARRVAMELRDGMAVNIGFGISANVPRILLEEGQHGK
VTWVIEQGAVGGVPLLDFKFGCASNAEAIMPSPHQFIYFQAGGFDASLLSFLQIDRHGSVNVSKLSARPHVTAGAGGFVD
ITARAKKIVFSGFFNAGAKLSLADGGIRIDQEGKVKKVVNEVEHISFSGKRAVAQGQDITYVTERCVMKLTPDGLMVMEL
APGIDLERDVLAQAEMPLGVANDLKVTPAALYQDRPIGLSLNGGASLGGAHG

Specific function: Unknown

COG id: COG4670

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae AtoD [H]

Homologues:

Organism=Escherichia coli, GI1787985, Length=523, Percent_Identity=38.0497131931166, Blast_Score=365, Evalue=1e-102,
Organism=Escherichia coli, GI1788551, Length=249, Percent_Identity=26.5060240963855, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014388
- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: NA

Molecular weight: Translated: 56545; Mature: 56413

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVVSAAQAAGLIKDGMTVSVSSSSGLGCPDAVLAAIGERFDMEGHPKNITTMHPIAAG
CCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCC
DMYGIKGIDHLAKPGLLKRTLCGSYPSGPSSAEPPQIWKMIGDNSVAAYNVPSGILFDMH
CCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEHHH
REAAAKRPGVLTKVGLDTFADPRHQGCAMNAAASEPIVSVQQFDGEEWLYFRSIVPHVSI
HHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCEEHHHHHCCCEEE
IRATTSDERGNLTYEHEGAYLGGLEQALAARNNGGIVIAQVKRVVENGTLKPHDVRVPGV
EEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCEECCCE
LVDHIVVAPDQLQTTLTPYDPAISGEIFRPLSTFRNAEMNVQKVIARRVAMELRDGMAVN
EEEEEEECCHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEE
IGFGISANVPRILLEEGQHGKVTWVIEQGAVGGVPLLDFKFGCASNAEAIMPSPHQFIYF
EECCCCCCCCHHEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
QAGGFDASLLSFLQIDRHGSVNVSKLSARPHVTAGAGGFVDITARAKKIVFSGFFNAGAK
EECCCCHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCEEEEEHHHHEEEEEHHCCCCCE
LSLADGGIRIDQEGKVKKVVNEVEHISFSGKRAVAQGQDITYVTERCVMKLTPDGLMVME
EEEECCCEEECCCCCHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHEEECCCCEEEEE
LAPGIDLERDVLAQAEMPLGVANDLKVTPAALYQDRPIGLSLNGGASLGGAHG
ECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure 
SKVVSAAQAAGLIKDGMTVSVSSSSGLGCPDAVLAAIGERFDMEGHPKNITTMHPIAAG
CHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCC
DMYGIKGIDHLAKPGLLKRTLCGSYPSGPSSAEPPQIWKMIGDNSVAAYNVPSGILFDMH
CCCCCCCHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCEEHHH
REAAAKRPGVLTKVGLDTFADPRHQGCAMNAAASEPIVSVQQFDGEEWLYFRSIVPHVSI
HHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCEEHHHHHCCCEEE
IRATTSDERGNLTYEHEGAYLGGLEQALAARNNGGIVIAQVKRVVENGTLKPHDVRVPGV
EEEECCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCEECCCE
LVDHIVVAPDQLQTTLTPYDPAISGEIFRPLSTFRNAEMNVQKVIARRVAMELRDGMAVN
EEEEEEECCHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEE
IGFGISANVPRILLEEGQHGKVTWVIEQGAVGGVPLLDFKFGCASNAEAIMPSPHQFIYF
EECCCCCCCCHHEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEE
QAGGFDASLLSFLQIDRHGSVNVSKLSARPHVTAGAGGFVDITARAKKIVFSGFFNAGAK
EECCCCHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCEEEEEHHHHEEEEEHHCCCCCE
LSLADGGIRIDQEGKVKKVVNEVEHISFSGKRAVAQGQDITYVTERCVMKLTPDGLMVME
EEEECCCEEECCCCCHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHEEECCCCEEEEE
LAPGIDLERDVLAQAEMPLGVANDLKVTPAALYQDRPIGLSLNGGASLGGAHG
ECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 3541912; 7984428 [H]