| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is pldB [H]
Identifier: 13472666
GI number: 13472666
Start: 2442334
End: 2443311
Strand: Direct
Name: pldB [H]
Synonym: mlr3034
Alternate gene names: 13472666
Gene position: 2442334-2443311 (Clockwise)
Preceding gene: 13472664
Following gene: 13472667
Centisome position: 34.71
GC content: 65.24
Gene sequence:
>978_bases ATGACGGACCTTCTCCACGACACGCCGCTTTTCCATGAAACTGAGGGCAATCCGCGACCGGAAAACGCTACCGGCGGCTT TTTCATTACGCGCGACCGCAAGAAGATCCGCTATGGCCTCTTCGCGGCGGTGGCGCGCCCGATGCGGGGCACCGTGGTGC TCCTGTCCGGCCGCAACGAGTGCATCGAGAAATATTTCGAAACCATCCGCGACCTTGCCGCCCGCGGCTTTGGTGTCGCC ACGCTCGATTGGCGCGGCCAGGGCGATTCCGACCGGCTGATCCGCGATCGCCAGCGCGGCTATGTCAGGTCCTTCCGCGA CTACACGGCCGATCTGGAGCAGTTCTTCGAGGAGATCGTGCTGCCCGATTGCCGCGGGCCGTATTACATCCTCGCCCATT CAGCCGGAGCGGTGATCGCGCTGCTTGCCGCGCCGTCGATGGTGAACCGCGTGCGGCGCATGGTGCTGATCGCGCCATTC CTGACGTTGCCCGACCTGCCGGTCTCGATCCGAACGGTCCGCCGCGTCTGTTCGGTCTTCTGCGCTTTGGGGCTCGGCCG GCTCTATGCCGCCTGGGGTCCACGGCCCAGACACACGCTGCCGTTCGAGGCCAACAAGGTAACGTCGGATCCGCGGCGCT ACCGCCGCAACACGCGCATCTACGAAGAGTATCCGCGAATGGCGCTTGGCGGTCCGACGATCCGCTGGCTGCAGGCGGCG GCGAAGGCGTCGGAAGCCATCAGCGACCCCGACTTCATGGCCCGCATACAGGTGCCTCTGCTGATCATCGCCGCCGGCGC CGACCGGGTCGTCTCGACCAGGGCGGTGGAAGCCTATGCCAGAAGCCTGAGGCTCGGTTCGCTGCTGATGATCGACGGCT CCAAGCACGAAATCCTGCAAGAGGTCGATCTCTACCGCGAACAATTCCTTGCCGCCTTCGACGCCTTCATCCCCGGCTCG GACGACCCGACGGCCTGA
Upstream 100 bases:
>100_bases AACCCGGATTTGCTTTGCTTTTGATGCATTGGCGTCTATCACCTTGACGAGGCCAGCCGCGACAGGCTGGCACCTGAAGA CGCCGAGCACAAAGCGCCGC
Downstream 100 bases:
>100_bases CCGGCATCTCGGGCCGGATAGCTGACACACCGTTGTCAGGATGATCGGCCAGCCGCTCCCCGCGGCAGGCAAACCGCTAA AGATTCTGACAGCCCGCCCC
Product: lysophospholipase L2
Products: NA
Alternate protein names: Lecithinase B [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNECIEKYFETIRDLAARGFGVA TLDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIVLPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPF LTLPDLPVSIRTVRRVCSVFCALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAA AKASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQEVDLYREQFLAAFDAFIPGS DDPTA
Sequences:
>Translated_325_residues MTDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNECIEKYFETIRDLAARGFGVA TLDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIVLPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPF LTLPDLPVSIRTVRRVCSVFCALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAA AKASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQEVDLYREQFLAAFDAFIPGS DDPTA >Mature_324_residues TDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNECIEKYFETIRDLAARGFGVAT LDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIVLPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPFL TLPDLPVSIRTVRRVCSVFCALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAAA KASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQEVDLYREQFLAAFDAFIPGSD DPTA
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cell inner membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994980, Length=286, Percent_Identity=33.5664335664336, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 36609; Mature: 36477
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNE CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCHH CIEKYFETIRDLAARGFGVATLDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIV HHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPFLTLPDLPVSIRTVRRVCSVF CCCCCCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH CALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHCCCCHHHHHHHH AKASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQ HHHHHHCCCCHHHHHEECCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH EVDLYREQFLAAFDAFIPGSDDPTA HHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TDLLHDTPLFHETEGNPRPENATGGFFITRDRKKIRYGLFAAVARPMRGTVVLLSGRNE CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCHH CIEKYFETIRDLAARGFGVATLDWRGQGDSDRLIRDRQRGYVRSFRDYTADLEQFFEEIV HHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPDCRGPYYILAHSAGAVIALLAAPSMVNRVRRMVLIAPFLTLPDLPVSIRTVRRVCSVF CCCCCCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH CALGLGRLYAAWGPRPRHTLPFEANKVTSDPRRYRRNTRIYEEYPRMALGGPTIRWLQAA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHCCCHHCCCCHHHHHHHH AKASEAISDPDFMARIQVPLLIIAAGADRVVSTRAVEAYARSLRLGSLLMIDGSKHEILQ HHHHHHCCCCHHHHHEECCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH EVDLYREQFLAAFDAFIPGSDDPTA HHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]