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The map label for this gene is ycbK [H]

Identifier: 13472639

GI number: 13472639

Start: 2405726

End: 2407594

Strand: Reverse

Name: ycbK [H]

Synonym: mll2999

Alternate gene names: 13472639

Gene position: 2407594-2405726 (Counterclockwise)

Preceding gene: 13472640

Following gene: 13472637

Centisome position: 34.22

GC content: 67.09

Gene sequence:

>1869_bases
GTGATTGTCGCTTTTGGTTTTGTTGCCGCGGCAGCCACTGGCGCCAGCGCTGAAACGCGTTCGCTGAAGCTCTATCACCT
GCACACGCATGAAAAGGCCGAGATCGTCTACAAGCGCAACGGCCGCTACCTTCCCGAAGGTCTGCGCAAGATCAACATCA
TCCTGCGCGACTGGCGCCGCAACGAGCCGACCAAGATGGATCCGCGCCTGCTGGACCTGGTCTGGGAGGCCTATCGCGAA
AGCGGCGCCACCGACTATATCCAGGTCGTGTGCGGCTACCGTTCGCCGGCGACCAACTCGATGCTGCGCAGCCGCAGCCG
CGGTGTCGCCGAGAAGAGCCAGCATATGCTCGGCAAGGCGATGGACTTCTACATTCCCGGCGTGCCGCTGAAGAAGCTGC
GCAATATCGGCCTGAAGATGCAGGGCGGTGGCGTCGGCTACTATCCGACCTCCGGTTCGCCATTCGTCCATATGGATGTC
GGCAATGTGCGCCACTGGCCCGGCATCAGCCGCCAGGAACTGGTCAGCCTGTTCCCCAACGGCAAGACGCTGCATGTGCC
GAGCGACGGTCGGCCGCTTCCCGGCTATGAGCAGGCGATGGCCGCCTACAAGGCACGCAAGGGCGCTGGCACGCCCAATG
TCGAGCTTGCGAGTGCCGGCGGCAGCGGCAAGAAGTCCGGTGGGTTCCTGGCTGCCTTGTTTGGCGGCGGCGGCTCCGAT
GAAGCCGATGACAGCGCCGATGTCGAGACCGCTTCGGCAGCCCCTGCGCCCAAGCCTAGAAACCTGAAGCCGGCCGCGAC
CGCCAAGAGCAGCAACCTGCCGGGCATCGCCGTCGTCGCGCCCGAGAATGCACAGCGCGCCAACGTTCCGCAGATTGCCG
ACGAGCAGGCTCCGGAACCGGAGAAGGACACGCCGGAAACGATCATCGCCGCACTGCCGGCCAAGGAGATTCCGCTGCCC
GATTTCGCGCCGCGCCCGAAGGCCGATGTCGGCGCGCAGCCTGAGAATGTTCCGTTCGCCATGGCGGACGCGACGGCGAC
CACCGAACAGGCCGTGGCGACCGCGCAGGCGCCGGCGAACATGCCGTTCGGCAAGGCTGACCCCGCAGCGCTCGCGGCGG
CGGCTGCAGCGGCTGATCCGGCGCAGGTTGCCATCAACAACATCCCCGTGCCGACATGGCGCCCTGAACGCACGCTGCCG
GCGGATCTTGCGCCGCCGCCAAGCAAGGATGTGCTGATGGCGCTGGCGGATACGGCCGAACAGGGCAAGACCGCGACGGA
TGCGTTCTCGGTGCTGCCGACCGCGCGGCCCGAGCCGGCCAAGCCGGACGCCGTCAAGGCCGTGCTCGACGAGGCCAACG
CGCAGGTCGGCAATGCCGACGAATACAAGCAGGTCGGCAATGCCGACGAATACAAGCGGGTCGGCAATGCCGACGAATAC
AAGGTTGCGTCGCTGGCTGAAGAGCCGCGCTCGGCCTTTAACGATCCGTCTTACGTCGATGTCGCATCGCCGCGCCAGGC
CGTTGCCGCCCGTCCGGCCGGTTCCGATCCGGCTGCCGCGATCGGTGCCGGCGTGAAGACGACCCGCAAGGAAGCCAGGG
CCACCGCCCGCGACCAGAAGCCAGGCCCCAGGGCCATGGTGGTCGCCGCGGCTCCCCAGGCCGCCCGCTGGGCGCTGACC
AGCGGTGATAACGTCGGCACCGTTTCGAGCGCGACGACCGCGCCGGGCTACGCCTACAACATCGTGCACACGCCGCCGAG
CGAGGTCTATACCGCCGGCTTCCAGACCGATGCCCAGGCGCCAGACCCCAGCCGCTTCACCGGCAACGCCGTCAAGTTCC
TGTCGGTTGCCCGCTTCCAGACGAAGTAG

Upstream 100 bases:

>100_bases
CAAACGGCAGCCTGCAAGGCCTTTTGATTTGAACAGAATCGAACGACTCAAAAACGGGCGTCATGATCATTTGAGCGTCT
GGCCGAGATGGCTGGCAGCG

Downstream 100 bases:

>100_bases
CCGGCTGTCCAGATAAAGCAGAAGCCGCGCAGGGCAACCGGCGCGGCTTTTTGCTTTTCAGGGGTACGGCAGATGCGATG
CCCCGGTGCTGGGGATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MIVAFGFVAAAATGASAETRSLKLYHLHTHEKAEIVYKRNGRYLPEGLRKINIILRDWRRNEPTKMDPRLLDLVWEAYRE
SGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKAMDFYIPGVPLKKLRNIGLKMQGGGVGYYPTSGSPFVHMDV
GNVRHWPGISRQELVSLFPNGKTLHVPSDGRPLPGYEQAMAAYKARKGAGTPNVELASAGGSGKKSGGFLAALFGGGGSD
EADDSADVETASAAPAPKPRNLKPAATAKSSNLPGIAVVAPENAQRANVPQIADEQAPEPEKDTPETIIAALPAKEIPLP
DFAPRPKADVGAQPENVPFAMADATATTEQAVATAQAPANMPFGKADPAALAAAAAAADPAQVAINNIPVPTWRPERTLP
ADLAPPPSKDVLMALADTAEQGKTATDAFSVLPTARPEPAKPDAVKAVLDEANAQVGNADEYKQVGNADEYKRVGNADEY
KVASLAEEPRSAFNDPSYVDVASPRQAVAARPAGSDPAAAIGAGVKTTRKEARATARDQKPGPRAMVVAAAPQAARWALT
SGDNVGTVSSATTAPGYAYNIVHTPPSEVYTAGFQTDAQAPDPSRFTGNAVKFLSVARFQTK

Sequences:

>Translated_622_residues
MIVAFGFVAAAATGASAETRSLKLYHLHTHEKAEIVYKRNGRYLPEGLRKINIILRDWRRNEPTKMDPRLLDLVWEAYRE
SGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKAMDFYIPGVPLKKLRNIGLKMQGGGVGYYPTSGSPFVHMDV
GNVRHWPGISRQELVSLFPNGKTLHVPSDGRPLPGYEQAMAAYKARKGAGTPNVELASAGGSGKKSGGFLAALFGGGGSD
EADDSADVETASAAPAPKPRNLKPAATAKSSNLPGIAVVAPENAQRANVPQIADEQAPEPEKDTPETIIAALPAKEIPLP
DFAPRPKADVGAQPENVPFAMADATATTEQAVATAQAPANMPFGKADPAALAAAAAAADPAQVAINNIPVPTWRPERTLP
ADLAPPPSKDVLMALADTAEQGKTATDAFSVLPTARPEPAKPDAVKAVLDEANAQVGNADEYKQVGNADEYKRVGNADEY
KVASLAEEPRSAFNDPSYVDVASPRQAVAARPAGSDPAAAIGAGVKTTRKEARATARDQKPGPRAMVVAAAPQAARWALT
SGDNVGTVSSATTAPGYAYNIVHTPPSEVYTAGFQTDAQAPDPSRFTGNAVKFLSVARFQTK
>Mature_622_residues
MIVAFGFVAAAATGASAETRSLKLYHLHTHEKAEIVYKRNGRYLPEGLRKINIILRDWRRNEPTKMDPRLLDLVWEAYRE
SGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKAMDFYIPGVPLKKLRNIGLKMQGGGVGYYPTSGSPFVHMDV
GNVRHWPGISRQELVSLFPNGKTLHVPSDGRPLPGYEQAMAAYKARKGAGTPNVELASAGGSGKKSGGFLAALFGGGGSD
EADDSADVETASAAPAPKPRNLKPAATAKSSNLPGIAVVAPENAQRANVPQIADEQAPEPEKDTPETIIAALPAKEIPLP
DFAPRPKADVGAQPENVPFAMADATATTEQAVATAQAPANMPFGKADPAALAAAAAAADPAQVAINNIPVPTWRPERTLP
ADLAPPPSKDVLMALADTAEQGKTATDAFSVLPTARPEPAKPDAVKAVLDEANAQVGNADEYKQVGNADEYKRVGNADEY
KVASLAEEPRSAFNDPSYVDVASPRQAVAARPAGSDPAAAIGAGVKTTRKEARATARDQKPGPRAMVVAAAPQAARWALT
SGDNVGTVSSATTAPGYAYNIVHTPPSEVYTAGFQTDAQAPDPSRFTGNAVKFLSVARFQTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=160, Percent_Identity=46.25, Blast_Score=128, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 65403; Mature: 65403

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAFGFVAAAATGASAETRSLKLYHLHTHEKAEIVYKRNGRYLPEGLRKINIILRDWRR
CEEEEEEHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
NEPTKMDPRLLDLVWEAYRESGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKA
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH
MDFYIPGVPLKKLRNIGLKMQGGGVGYYPTSGSPFVHMDVGNVRHWPGISRQELVSLFPN
HHHHCCCCCHHHHHHCCCEEECCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCC
GKTLHVPSDGRPLPGYEQAMAAYKARKGAGTPNVELASAGGSGKKSGGFLAALFGGGGSD
CCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCC
EADDSADVETASAAPAPKPRNLKPAATAKSSNLPGIAVVAPENAQRANVPQIADEQAPEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
EKDTPETIIAALPAKEIPLPDFAPRPKADVGAQPENVPFAMADATATTEQAVATAQAPAN
CCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCC
MPFGKADPAALAAAAAAADPAQVAINNIPVPTWRPERTLPADLAPPPSKDVLMALADTAE
CCCCCCCHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QGKTATDAFSVLPTARPEPAKPDAVKAVLDEANAQVGNADEYKQVGNADEYKRVGNADEY
HCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCCCCH
KVASLAEEPRSAFNDPSYVDVASPRQAVAARPAGSDPAAAIGAGVKTTRKEARATARDQK
HHHHHHHHHHHHCCCCCEEECCCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCC
PGPRAMVVAAAPQAARWALTSGDNVGTVSSATTAPGYAYNIVHTPPSEVYTAGFQTDAQA
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHEECCCCCCCCC
PDPSRFTGNAVKFLSVARFQTK
CCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIVAFGFVAAAATGASAETRSLKLYHLHTHEKAEIVYKRNGRYLPEGLRKINIILRDWRR
CEEEEEEHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
NEPTKMDPRLLDLVWEAYRESGATDYIQVVCGYRSPATNSMLRSRSRGVAEKSQHMLGKA
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHH
MDFYIPGVPLKKLRNIGLKMQGGGVGYYPTSGSPFVHMDVGNVRHWPGISRQELVSLFPN
HHHHCCCCCHHHHHHCCCEEECCEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCC
GKTLHVPSDGRPLPGYEQAMAAYKARKGAGTPNVELASAGGSGKKSGGFLAALFGGGGSD
CCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCC
EADDSADVETASAAPAPKPRNLKPAATAKSSNLPGIAVVAPENAQRANVPQIADEQAPEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
EKDTPETIIAALPAKEIPLPDFAPRPKADVGAQPENVPFAMADATATTEQAVATAQAPAN
CCCCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCC
MPFGKADPAALAAAAAAADPAQVAINNIPVPTWRPERTLPADLAPPPSKDVLMALADTAE
CCCCCCCHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QGKTATDAFSVLPTARPEPAKPDAVKAVLDEANAQVGNADEYKQVGNADEYKRVGNADEY
HCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHCCCCCCH
KVASLAEEPRSAFNDPSYVDVASPRQAVAARPAGSDPAAAIGAGVKTTRKEARATARDQK
HHHHHHHHHHHHCCCCCEEECCCCHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCC
PGPRAMVVAAAPQAARWALTSGDNVGTVSSATTAPGYAYNIVHTPPSEVYTAGFQTDAQA
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHHEECCCCCCCCC
PDPSRFTGNAVKFLSVARFQTK
CCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]