BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

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The map label for this gene is ucpA [C]

Identifier: 13472637

GI number: 13472637

Start: 2403695

End: 2404450

Strand: Reverse

Name: ucpA [C]

Synonym: mll2997

Alternate gene names: 13472637

Gene position: 2404450-2403695 (Counterclockwise)

Preceding gene: 13472639

Following gene: 13472635

Centisome position: 34.17

GC content: 66.67

Gene sequence:

>756_bases
ATGGACATGACGACCAAAGCGAACGTGCTGATCACCGGCGCCAACAAGGGCATCGGCCTCGAAACCGCTCGCCGGCTGGC
GGCCATGGGGTTCAATGTCTGGCTCGGCGCCCGCGATGCCGAGCGCGGGGAGGCGGCGGCAAAGGCGTTGCGCAATGAAG
GGCTCGACGTGGAATGGCTCGCGCTCGACGTCGCCAGCGACGACAGTGTGGCGGCGGCGGCCAGAACCTTGACGGCGCGG
GTCTCCAGCCTCGACGTGCTGGTCAACAATGCCGGCATTGCCCCAGGCTATGTTGACGCGCTCGGGCCTGACGGCCGCTA
CGAACGGGCGCCAAGTCGCGAGAATGTCGCCGACATGAAGGCCACCTTTGACGTCAACGTCTTCGGCCCGGTTCGCGTCA
CCCAGGCCTTCCTGCCGCTGCTCCTGGCAGCGCCCGCCGCCCGCATCGTCATGGTCAGCAGTTACCTCGGCTCGATCGCG
CGCGCCGCGGGCAACAGCCAATCGCCCAATGTCATGGGTTATGGCAGCTCGAAGACAGCGCTCAATGCCATCACCGTGGC
CTTCGCCCGGGAGCTGTCGCCGCGCGGCATGATGGTCAACGCTGCGGCTCCGGGCTACACCGCGACGGATCTCAATGCGC
ACAGAGGCACCCGTACGGTGCAGCAGGCGGCCGAGATCATCGTGCAACTGGCGGCGCTGAAGGCTGGCGGGCCTACCGGC
GGATATTTCGACGAGAATGGTCCGTTGCCTTGGTGA

Upstream 100 bases:

>100_bases
GGGCCGCGCAACCAGTTGAGAGGATTAGGCAAGAGGAAGCGAATATCCGGCGCGCGAAATCGGCCGACGCACGTCATGTC
TGGGTTTCAAAGAAGGAGAC

Downstream 100 bases:

>100_bases
GCGGGGACCGACTATTTCCTGAGCTGGCTGGCAGCGCGTGCGAGCGCTTCGATTTCGTCCCACTTGCCGGCCTTGACCAT
GTCGTCGGGCGCGACCCAGG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDMTTKANVLITGANKGIGLETARRLAAMGFNVWLGARDAERGEAAAKALRNEGLDVEWLALDVASDDSVAAAARTLTAR
VSSLDVLVNNAGIAPGYVDALGPDGRYERAPSRENVADMKATFDVNVFGPVRVTQAFLPLLLAAPAARIVMVSSYLGSIA
RAAGNSQSPNVMGYGSSKTALNAITVAFARELSPRGMMVNAAAPGYTATDLNAHRGTRTVQQAAEIIVQLAALKAGGPTG
GYFDENGPLPW

Sequences:

>Translated_251_residues
MDMTTKANVLITGANKGIGLETARRLAAMGFNVWLGARDAERGEAAAKALRNEGLDVEWLALDVASDDSVAAAARTLTAR
VSSLDVLVNNAGIAPGYVDALGPDGRYERAPSRENVADMKATFDVNVFGPVRVTQAFLPLLLAAPAARIVMVSSYLGSIA
RAAGNSQSPNVMGYGSSKTALNAITVAFARELSPRGMMVNAAAPGYTATDLNAHRGTRTVQQAAEIIVQLAALKAGGPTG
GYFDENGPLPW
>Mature_251_residues
MDMTTKANVLITGANKGIGLETARRLAAMGFNVWLGARDAERGEAAAKALRNEGLDVEWLALDVASDDSVAAAARTLTAR
VSSLDVLVNNAGIAPGYVDALGPDGRYERAPSRENVADMKATFDVNVFGPVRVTQAFLPLLLAAPAARIVMVSSYLGSIA
RAAGNSQSPNVMGYGSSKTALNAITVAFARELSPRGMMVNAAAPGYTATDLNAHRGTRTVQQAAEIIVQLAALKAGGPTG
GYFDENGPLPW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4502599, Length=286, Percent_Identity=30.4195804195804, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI225579078, Length=220, Percent_Identity=33.1818181818182, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4502601, Length=284, Percent_Identity=28.8732394366197, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI32483357, Length=203, Percent_Identity=31.5270935960591, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI7706523, Length=275, Percent_Identity=30.5454545454545, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI186928839, Length=264, Percent_Identity=27.6515151515151, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI223718074, Length=279, Percent_Identity=31.1827956989247, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI166795268, Length=217, Percent_Identity=30.8755760368664, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI150247226, Length=221, Percent_Identity=34.841628959276, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI19743808, Length=204, Percent_Identity=35.7843137254902, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI119392083, Length=205, Percent_Identity=32.6829268292683, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI10190746, Length=226, Percent_Identity=34.9557522123894, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI7706318, Length=203, Percent_Identity=29.064039408867, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI7657478, Length=211, Percent_Identity=33.175355450237, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI44680136, Length=248, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI44680133, Length=248, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI17738292, Length=248, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI146231950, Length=215, Percent_Identity=35.3488372093023, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI20149619, Length=215, Percent_Identity=27.4418604651163, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI33667109, Length=206, Percent_Identity=32.0388349514563, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI5031737, Length=206, Percent_Identity=32.0388349514563, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI40548397, Length=213, Percent_Identity=31.4553990610329, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI214010158, Length=213, Percent_Identity=31.4553990610329, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI214010156, Length=213, Percent_Identity=31.4553990610329, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI22758144, Length=213, Percent_Identity=31.4553990610329, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI126723191, Length=203, Percent_Identity=31.5270935960591, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI4504503, Length=205, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87082100, Length=211, Percent_Identity=33.175355450237, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1786701, Length=201, Percent_Identity=32.8358208955224, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787335, Length=231, Percent_Identity=29.8701298701299, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790717, Length=204, Percent_Identity=27.9411764705882, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI87082160, Length=202, Percent_Identity=25.7425742574257, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788459, Length=206, Percent_Identity=29.6116504854369, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786812, Length=213, Percent_Identity=30.9859154929577, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787820, Length=198, Percent_Identity=28.7878787878788, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17558996, Length=254, Percent_Identity=29.1338582677165, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17558994, Length=254, Percent_Identity=29.5275590551181, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17558990, Length=261, Percent_Identity=29.5019157088123, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17505416, Length=263, Percent_Identity=29.6577946768061, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI193207563, Length=254, Percent_Identity=29.9212598425197, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17558006, Length=214, Percent_Identity=28.5046728971963, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=204, Percent_Identity=28.921568627451, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17532177, Length=260, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI115534660, Length=207, Percent_Identity=34.2995169082126, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17561402, Length=204, Percent_Identity=28.921568627451, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI72001658, Length=252, Percent_Identity=28.1746031746032, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=204, Percent_Identity=30.3921568627451, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=203, Percent_Identity=32.0197044334975, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=216, Percent_Identity=31.9444444444444, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17559962, Length=254, Percent_Identity=26.3779527559055, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=203, Percent_Identity=31.5270935960591, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=233, Percent_Identity=30.4721030042918, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17541382, Length=264, Percent_Identity=28.4090909090909, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=210, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17559964, Length=235, Percent_Identity=27.6595744680851, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17542178, Length=244, Percent_Identity=30.7377049180328, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=211, Percent_Identity=31.2796208530806, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=203, Percent_Identity=30.5418719211823, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=213, Percent_Identity=27.2300469483568, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=213, Percent_Identity=27.2300469483568, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=226, Percent_Identity=32.3008849557522, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI23397609, Length=268, Percent_Identity=32.089552238806, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24640547, Length=260, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45554248, Length=272, Percent_Identity=30.1470588235294, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24640117, Length=272, Percent_Identity=30.1470588235294, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355319, Length=203, Percent_Identity=31.0344827586207, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI45553409, Length=208, Percent_Identity=31.7307692307692, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24647948, Length=208, Percent_Identity=31.7307692307692, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24647946, Length=208, Percent_Identity=31.7307692307692, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI22024069, Length=211, Percent_Identity=33.175355450237, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21358495, Length=208, Percent_Identity=29.8076923076923, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24643142, Length=205, Percent_Identity=32.6829268292683, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573296, Length=226, Percent_Identity=31.4159292035398, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281364892, Length=185, Percent_Identity=31.3513513513514, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24640442, Length=237, Percent_Identity=25.7383966244726, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28571526, Length=210, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641232, Length=207, Percent_Identity=28.0193236714976, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21357041, Length=211, Percent_Identity=29.8578199052133, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24656154, Length=231, Percent_Identity=30.7359307359307, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI19922628, Length=231, Percent_Identity=30.7359307359307, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26118; Mature: 26118

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTTKANVLITGANKGIGLETARRLAAMGFNVWLGARDAERGEAAAKALRNEGLDVEWL
CCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCEEEE
ALDVASDDSVAAAARTLTARVSSLDVLVNNAGIAPGYVDALGPDGRYERAPSRENVADMK
EEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHH
ATFDVNVFGPVRVTQAFLPLLLAAPAARIVMVSSYLGSIARAAGNSQSPNVMGYGSSKTA
EEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHH
LNAITVAFARELSPRGMMVNAAAPGYTATDLNAHRGTRTVQQAAEIIVQLAALKAGGPTG
HHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GYFDENGPLPW
CCCCCCCCCCC
>Mature Secondary Structure
MDMTTKANVLITGANKGIGLETARRLAAMGFNVWLGARDAERGEAAAKALRNEGLDVEWL
CCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCEEEE
ALDVASDDSVAAAARTLTARVSSLDVLVNNAGIAPGYVDALGPDGRYERAPSRENVADMK
EEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCHHHHH
ATFDVNVFGPVRVTQAFLPLLLAAPAARIVMVSSYLGSIARAAGNSQSPNVMGYGSSKTA
EEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHH
LNAITVAFARELSPRGMMVNAAAPGYTATDLNAHRGTRTVQQAAEIIVQLAALKAGGPTG
HHHHHHHHHHHCCCCCEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GYFDENGPLPW
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1508151 [H]