Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472624

Identifier: 13472624

GI number: 13472624

Start: 2393136

End: 2393945

Strand: Direct

Name: 13472624

Synonym: mlr2979

Alternate gene names: NA

Gene position: 2393136-2393945 (Clockwise)

Preceding gene: 13472623

Following gene: 13472625

Centisome position: 34.01

GC content: 58.64

Gene sequence:

>810_bases
GTGACACGCTTTGGGGTTCGCGCGTGTCACTGTCCCAAAACCGCTGCGCACTTTTGGGTGACACGCACGGGCGGTCCCAA
TTTCGCCCCCTTTCTGGTAACCTTCGGTTCCTCTCCAAAGCCAAGGGAATCGCGACCGGGAATGCAGCTCAAACGGCACG
CAATCATACTGGCTTCGGCCCTGGCGGCGACCCTTGCCGCCACCAGACCGGCTTACGTGCATCCGCACGTCTTCGCCGAG
GCACGCCTGGACGTCATCCTGTCCCCGGATCACCAAAGTGTGAAAGCGCTGCGTCATCTCTGGCGCTTCGACGACCTGTT
TTCGAGTACGGTGATGATGGAGTTCGACAAGAACTCCGACCTGAAGCTTGACGACAAGGAGCTGAAGGAGGTCGCCGACA
CCGTCCATGCCTCGCTGGCCGAATTCAACTATTTCCAACTCGTCACGCAGAACGGCAAGGACGTGACGATGGTGCCGCCT
CCACATCTGATGGCCAATTTCGACAACGACCAGCTGATCATCCTGTTCGAGTCCGAGCCCAAGGTGCCGATCAAGCTGAC
CGGCACGATCGACATCGGCGTCTATGATCCGACCTTCTACACGGCGATCGACTTCACCGAGGACTCCAACATCACGGTTG
CAGGCCTGCCGTCGAATTGCACCAGCAAGGTGATCCGGCCGGACCCGGACGAGGCCATCAAGGAAAACCAGAAGACCCTG
ACGGATGCCTTCTTCAACGACCCGACAGGCACCGACATGAGCAAGATCTTTGCCACCAAACTCGAACTGACCTGTCAGCC
AGAAGGATGA

Upstream 100 bases:

>100_bases
ACTTCCTGGTGCAATGGTTCAGGACGCGTGAGGTCGCTTGACCTGCCCAGGACTCTTGTGGCGTGCGTGTTGTAGGCGCA
AAACCGCCGCGCACTTTTGG

Downstream 100 bases:

>100_bases
AGCCGGTGACGAAACCGTCCCTGCGTTTGGCATTCGGCCTGTTGGCCCTCACCTTTGCCGCGATGCACTTCGCCAACGCC
GCGCACGCCCAGTCCTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASALAATLAATRPAYVHPHVFAE
ARLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSDLKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPP
PHLMANFDNDQLIILFESEPKVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTL
TDAFFNDPTGTDMSKIFATKLELTCQPEG

Sequences:

>Translated_269_residues
MTRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASALAATLAATRPAYVHPHVFAE
ARLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSDLKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPP
PHLMANFDNDQLIILFESEPKVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTL
TDAFFNDPTGTDMSKIFATKLELTCQPEG
>Mature_268_residues
TRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASALAATLAATRPAYVHPHVFAEA
RLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSDLKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPPP
HLMANFDNDQLIILFESEPKVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTLT
DAFFNDPTGTDMSKIFATKLELTCQPEG

Specific function: Unknown

COG id: COG3683

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29927; Mature: 29796

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASA
CCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
LAATLAATRPAYVHPHVFAEARLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSD
HHHHHHHCCCCEECCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
LKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPPPHLMANFDNDQLIILFESEP
CEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCHHEEECCCCEEEEEECCCC
KVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTL
CCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
TDAFFNDPTGTDMSKIFATKLELTCQPEG
HHHHCCCCCCCCHHHHHEEEEEEEECCCC
>Mature Secondary Structure 
TRFGVRACHCPKTAAHFWVTRTGGPNFAPFLVTFGSSPKPRESRPGMQLKRHAIILASA
CCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH
LAATLAATRPAYVHPHVFAEARLDVILSPDHQSVKALRHLWRFDDLFSSTVMMEFDKNSD
HHHHHHHCCCCEECCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
LKLDDKELKEVADTVHASLAEFNYFQLVTQNGKDVTMVPPPHLMANFDNDQLIILFESEP
CEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECCCHHEEECCCCEEEEEECCCC
KVPIKLTGTIDIGVYDPTFYTAIDFTEDSNITVAGLPSNCTSKVIRPDPDEAIKENQKTL
CCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
TDAFFNDPTGTDMSKIFATKLELTCQPEG
HHHHCCCCCCCCHHHHHEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA