| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472599
Identifier: 13472599
GI number: 13472599
Start: 2367777
End: 2369420
Strand: Direct
Name: 13472599
Synonym: mlr2945
Alternate gene names: NA
Gene position: 2367777-2369420 (Clockwise)
Preceding gene: 13472598
Following gene: 13472610
Centisome position: 33.65
GC content: 67.46
Gene sequence:
>1644_bases ATGATTGACGAGAAACCGGATAGCGAAGGCGTTTCGGCGCTGGCGCCGTTCCGGCATGGCATTTTCCGCGCCGTCTGGTC GGCAAGTCTCGTTTCCAATTTCGGTGGCCTGATCCAGGGCGTCGGCGCCGCCTGGATGATGACCACGATCGCAACCTCGC CCTATCAGGTCGCCCTGGTGCAGGCCTCGACCACCTTGCCGATCATGCTTTTCGCGCTTGTCGCCGGCGCCATCGCCGAC AGCTTCGACCGGCGCAAGGTGATGCTGGTGGCGCAGACCTTCATGCTGGTCGTTTCGGTGCTCCTGACGGTGTTCACCTA TTACAATTTGCTCACGCCCTGGACGCTGCTTGCCTTCACCTTCCTGATCGACAGCGGCACGGCGCTCAACAGCCCGTCCT GGCAGGCATCCGTCGGCGACATGGTTCCCCGCAACAAGGTGCCCGCGGCCGTTGCGCTGAACTCCATGGGCTTCAACCTG ACACGCAGCGTCGGCCCGGCGATCGGCGGCATCATCGTCGCCGCCGCCGGCGCCGCGGCCGCCTTCGCGGCGAACGCGGT CAGCTATATCGGCCTCATCATCGTGATGGCCCGCTGGAAGCCCGACGTGCCGGTGTCGACCTTGCCGCGCGAAACGCTGG GTGCCGCCATGGGTGCCGGCCTGCGCTATGTCGCCATGTCCCCCAACATCGGCAAGGTGCTGGTCAGGGGCGCGGCCTTC GGCTTCAGCGCCGGCGCGGTGCTGGCGCTCTTGCCGCTGGTCGCGCGCGACGTCGTCAAGGGCGATGCCTTGACCTACGG CATCATGTTGGGCTCCTTCGGCATCGGCGCCGTCGGCGGCGCGCTGATCAGCGTGCGGCTGCGGCAGCTGCTTTCCAGCG AGACGATGGTGCGCTGTGCCTTCGCCGGCTTCGCCGTCTGCGCCTTCAATGCCGCGCTCAGTCATCACGCCTGGCAGACC TCGCTCGGCCTGCTGGTCGGCGGCGCCTGCTGGGTGATCGCGCTCTCGCACTTCAACGTCACCGTGCAGATGGCGACGCC GCGCTGGGTGGTCGGCCGGGTTCTGTCGGTCTACCAGACCGCGACCTTCGGCGGCATCGCGCTGGGCAGCTGGATCTGGG GCGTCGTCGCCGATGCGCATGGCGCCGAGACGGCGCTGATCGCGGCCGCCATCGCCATGCTGGCCGGCGGCGCCATCGGC CTTGTCCTGCCGTTGCCGCAGCAGCAGGTGCTGAATCTCGACCCGCTCAACCGCTTCAAGGAACCGCATCTGGCGCTCGA CCTGAAGCCGCGCAGCGGTCCCATCGCCATCATGATCGAATACATCATCCGCCACGAGGACGAGGCGGAATTCCTCGCCA CCATGGCCGAACGCGGCCGGATCCGCCGCCGCGACGGCGCCCGCAACTGGACACTGGCGCGCGATCTCGAAAATCCCTCG ATATGGATCGAGCACTACCACACGCCGACCTGGCTCGAATATGTCAGGCACAATGGCCGCATCACCCATGCCGACGCCAT GGTCGGTGAGCGCCTGCGGGCGCTGCACAGCGGCGACGAGCCGCCGCGCGTGCGCCGCGTCATCGAGCGACCGACCACCG CCGGCACAGCACTGGTAATGGCCAAGGGGCCGATCGAGCACTGA
Upstream 100 bases:
>100_bases TTGCGCGCATGACGTTCGCCCTTTGCGGGTCGATGCCATAGTTTCGGCAAACGATGCGGAGAAACCGCAAGGATCAGCAC GCCGTGGCAGGAACCCATCC
Downstream 100 bases:
>100_bases TGCTGTCGGCCGATATCAGTCGATCAGCCGGCCGACTGGATCATGTAGAGCTTGCGCGTGGTTTCCCGGATGCGCCATTC GCCCTTCCAACCCTGCGGCA
Product: integral membrane efflux protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; MFS Transporter; Transporter Facilitator Family; Transmembrane Efflux Protein; Permeases Of Facilitator Superfamily; Permease; Facilitator Superfamily; Facilitator Superfamily Transporter; Facilitator MFS1 Protein; Multidrug ABC Transporter; Transport Transmembrane Protein; MFS Family Transporter Protein; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transmembrane Transporter; Permease Of Facilitator Superfamily Protein; ABC Transporter Permease Protein; Facilitator Transpoter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Membrane Efflux Protein MFS; Transporter Facilitator Family Protein; Dioxygenase; MFS Family Diterpenoid Transporter; Drug Resistance Efflux Protein; MFS Superfamily Transporter; Permeases Of Facilitator Superfamily Protein
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MIDEKPDSEGVSALAPFRHGIFRAVWSASLVSNFGGLIQGVGAAWMMTTIATSPYQVALVQASTTLPIMLFALVAGAIAD SFDRRKVMLVAQTFMLVVSVLLTVFTYYNLLTPWTLLAFTFLIDSGTALNSPSWQASVGDMVPRNKVPAAVALNSMGFNL TRSVGPAIGGIIVAAAGAAAAFAANAVSYIGLIIVMARWKPDVPVSTLPRETLGAAMGAGLRYVAMSPNIGKVLVRGAAF GFSAGAVLALLPLVARDVVKGDALTYGIMLGSFGIGAVGGALISVRLRQLLSSETMVRCAFAGFAVCAFNAALSHHAWQT SLGLLVGGACWVIALSHFNVTVQMATPRWVVGRVLSVYQTATFGGIALGSWIWGVVADAHGAETALIAAAIAMLAGGAIG LVLPLPQQQVLNLDPLNRFKEPHLALDLKPRSGPIAIMIEYIIRHEDEAEFLATMAERGRIRRRDGARNWTLARDLENPS IWIEHYHTPTWLEYVRHNGRITHADAMVGERLRALHSGDEPPRVRRVIERPTTAGTALVMAKGPIEH
Sequences:
>Translated_547_residues MIDEKPDSEGVSALAPFRHGIFRAVWSASLVSNFGGLIQGVGAAWMMTTIATSPYQVALVQASTTLPIMLFALVAGAIAD SFDRRKVMLVAQTFMLVVSVLLTVFTYYNLLTPWTLLAFTFLIDSGTALNSPSWQASVGDMVPRNKVPAAVALNSMGFNL TRSVGPAIGGIIVAAAGAAAAFAANAVSYIGLIIVMARWKPDVPVSTLPRETLGAAMGAGLRYVAMSPNIGKVLVRGAAF GFSAGAVLALLPLVARDVVKGDALTYGIMLGSFGIGAVGGALISVRLRQLLSSETMVRCAFAGFAVCAFNAALSHHAWQT SLGLLVGGACWVIALSHFNVTVQMATPRWVVGRVLSVYQTATFGGIALGSWIWGVVADAHGAETALIAAAIAMLAGGAIG LVLPLPQQQVLNLDPLNRFKEPHLALDLKPRSGPIAIMIEYIIRHEDEAEFLATMAERGRIRRRDGARNWTLARDLENPS IWIEHYHTPTWLEYVRHNGRITHADAMVGERLRALHSGDEPPRVRRVIERPTTAGTALVMAKGPIEH >Mature_547_residues MIDEKPDSEGVSALAPFRHGIFRAVWSASLVSNFGGLIQGVGAAWMMTTIATSPYQVALVQASTTLPIMLFALVAGAIAD SFDRRKVMLVAQTFMLVVSVLLTVFTYYNLLTPWTLLAFTFLIDSGTALNSPSWQASVGDMVPRNKVPAAVALNSMGFNL TRSVGPAIGGIIVAAAGAAAAFAANAVSYIGLIIVMARWKPDVPVSTLPRETLGAAMGAGLRYVAMSPNIGKVLVRGAAF GFSAGAVLALLPLVARDVVKGDALTYGIMLGSFGIGAVGGALISVRLRQLLSSETMVRCAFAGFAVCAFNAALSHHAWQT SLGLLVGGACWVIALSHFNVTVQMATPRWVVGRVLSVYQTATFGGIALGSWIWGVVADAHGAETALIAAAIAMLAGGAIG LVLPLPQQQVLNLDPLNRFKEPHLALDLKPRSGPIAIMIEYIIRHEDEAEFLATMAERGRIRRRDGARNWTLARDLENPS IWIEHYHTPTWLEYVRHNGRITHADAMVGERLRALHSGDEPPRVRRVIERPTTAGTALVMAKGPIEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58315; Mature: 58315
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDEKPDSEGVSALAPFRHGIFRAVWSASLVSNFGGLIQGVGAAWMMTTIATSPYQVALV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE QASTTLPIMLFALVAGAIADSFDRRKVMLVAQTFMLVVSVLLTVFTYYNLLTPWTLLAFT ECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLIDSGTALNSPSWQASVGDMVPRNKVPAAVALNSMGFNLTRSVGPAIGGIIVAAAGAAA HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH AFAANAVSYIGLIIVMARWKPDVPVSTLPRETLGAAMGAGLRYVAMSPNIGKVLVRGAAF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHC GFSAGAVLALLPLVARDVVKGDALTYGIMLGSFGIGAVGGALISVRLRQLLSSETMVRCA CCCHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH FAGFAVCAFNAALSHHAWQTSLGLLVGGACWVIALSHFNVTVQMATPRWVVGRVLSVYQT HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECEEEEEECCCHHHHHHHHHHHHH ATFGGIALGSWIWGVVADAHGAETALIAAAIAMLAGGAIGLVLPLPQQQVLNLDPLNRFK HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCHHHCC EPHLALDLKPRSGPIAIMIEYIIRHEDEAEFLATMAERGRIRRRDGARNWTLARDLENPS CCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC IWIEHYHTPTWLEYVRHNGRITHADAMVGERLRALHSGDEPPRVRRVIERPTTAGTALVM EEEEECCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE AKGPIEH ECCCCCC >Mature Secondary Structure MIDEKPDSEGVSALAPFRHGIFRAVWSASLVSNFGGLIQGVGAAWMMTTIATSPYQVALV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE QASTTLPIMLFALVAGAIADSFDRRKVMLVAQTFMLVVSVLLTVFTYYNLLTPWTLLAFT ECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLIDSGTALNSPSWQASVGDMVPRNKVPAAVALNSMGFNLTRSVGPAIGGIIVAAAGAAA HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH AFAANAVSYIGLIIVMARWKPDVPVSTLPRETLGAAMGAGLRYVAMSPNIGKVLVRGAAF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHC GFSAGAVLALLPLVARDVVKGDALTYGIMLGSFGIGAVGGALISVRLRQLLSSETMVRCA CCCHHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH FAGFAVCAFNAALSHHAWQTSLGLLVGGACWVIALSHFNVTVQMATPRWVVGRVLSVYQT HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECEEEEEECCCHHHHHHHHHHHHH ATFGGIALGSWIWGVVADAHGAETALIAAAIAMLAGGAIGLVLPLPQQQVLNLDPLNRFK HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCHHHCC EPHLALDLKPRSGPIAIMIEYIIRHEDEAEFLATMAERGRIRRRDGARNWTLARDLENPS CCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC IWIEHYHTPTWLEYVRHNGRITHADAMVGERLRALHSGDEPPRVRRVIERPTTAGTALVM EEEEECCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE AKGPIEH ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA