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The map label for this gene is 13472558

Identifier: 13472558

GI number: 13472558

Start: 2331316

End: 2331969

Strand: Direct

Name: 13472558

Synonym: mlr2892

Alternate gene names: NA

Gene position: 2331316-2331969 (Clockwise)

Preceding gene: 13472549

Following gene: 13472559

Centisome position: 33.13

GC content: 60.86

Gene sequence:

>654_bases
GTGAAGCGCAGTCTCGACCGCAAAACCAGGATAGCGCTCGAGCCGCGCAAGCAGCCGCGGCAGCAACGGTCGAGCAAGGT
TGTCGACCGTATCCTCGACGCGGCGCTGATCTTGACGCGGGAGCAAGGAACCAGGACGCCGACGACGCTCGCCATTGCGC
AGCGCGCGGGCCTCTCGGTCGGTTCGGTCTATCAATACTTTCCCAACAAGGAAGCCATTCTTCTGGATCTCGCCCGGCGC
TGGCTGTCCTCCTTTCCCGAGGTGATCGAGAGGCGCATCAAGGTCCCCCGACCCACCAACCGCGAAGAATTCCGGCGCGA
AGTGCGCAAGCTCTTCATCGACACGTCCAGCATCTATCTCGAGAACGCCACACTGATGCCGGTGATCGAGGCCATTTCCG
GCAACGCCGATCTCAGGCCGATCCAGGACGAATATGACGAGCAGATCATCGCGCTTTACGCCGCCTGGCTGCGGCATGTG
AATCCTGCTCTCGAAGACAAGATCGCCAAACGGCTCGGCCTTGTGATGATGGAGGTCGGGCACGCCTGCCGGCTGGTCGG
ACTGAAGCGAGATCGCAGGACATACAACCTCATCGAGGACGATGTCGAAGCCATGTGGCTCGCCCTTGTGAACCCCTATC
TCAACCTTGACTGA

Upstream 100 bases:

>100_bases
ACTGATTATTCGCGTTTGTCAACATGCGGATTTTAGAATGTATTGTGGACAGGATCCTGCGCCTGTGTTGGGACCAGGCG
GGGAACGAGGACATCGAGCA

Downstream 100 bases:

>100_bases
TTGCGCATTTCGAGAGGAATTTATGAAGACTGTCTATTCGCCGCTTCATGCTGGCCATGCCGGCCAGATGGAACTGGTCA
CCTCAGCCATCGTGCCGGGT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Protein; Regulatory Protein TetR

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKRSLDRKTRIALEPRKQPRQQRSSKVVDRILDAALILTREQGTRTPTTLAIAQRAGLSVGSVYQYFPNKEAILLDLARR
WLSSFPEVIERRIKVPRPTNREEFRREVRKLFIDTSSIYLENATLMPVIEAISGNADLRPIQDEYDEQIIALYAAWLRHV
NPALEDKIAKRLGLVMMEVGHACRLVGLKRDRRTYNLIEDDVEAMWLALVNPYLNLD

Sequences:

>Translated_217_residues
MKRSLDRKTRIALEPRKQPRQQRSSKVVDRILDAALILTREQGTRTPTTLAIAQRAGLSVGSVYQYFPNKEAILLDLARR
WLSSFPEVIERRIKVPRPTNREEFRREVRKLFIDTSSIYLENATLMPVIEAISGNADLRPIQDEYDEQIIALYAAWLRHV
NPALEDKIAKRLGLVMMEVGHACRLVGLKRDRRTYNLIEDDVEAMWLALVNPYLNLD
>Mature_217_residues
MKRSLDRKTRIALEPRKQPRQQRSSKVVDRILDAALILTREQGTRTPTTLAIAQRAGLSVGSVYQYFPNKEAILLDLARR
WLSSFPEVIERRIKVPRPTNREEFRREVRKLFIDTSSIYLENATLMPVIEAISGNADLRPIQDEYDEQIIALYAAWLRHV
NPALEDKIAKRLGLVMMEVGHACRLVGLKRDRRTYNLIEDDVEAMWLALVNPYLNLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25138; Mature: 25138

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLDRKTRIALEPRKQPRQQRSSKVVDRILDAALILTREQGTRTPTTLAIAQRAGLSV
CCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCH
GSVYQYFPNKEAILLDLARRWLSSFPEVIERRIKVPRPTNREEFRREVRKLFIDTSSIYL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHEE
ENATLMPVIEAISGNADLRPIQDEYDEQIIALYAAWLRHVNPALEDKIAKRLGLVMMEVG
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
HACRLVGLKRDRRTYNLIEDDVEAMWLALVNPYLNLD
HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRSLDRKTRIALEPRKQPRQQRSSKVVDRILDAALILTREQGTRTPTTLAIAQRAGLSV
CCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCH
GSVYQYFPNKEAILLDLARRWLSSFPEVIERRIKVPRPTNREEFRREVRKLFIDTSSIYL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHEE
ENATLMPVIEAISGNADLRPIQDEYDEQIIALYAAWLRHVNPALEDKIAKRLGLVMMEVG
CCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
HACRLVGLKRDRRTYNLIEDDVEAMWLALVNPYLNLD
HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA