| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472153
Identifier: 13472153
GI number: 13472153
Start: 1904700
End: 1905761
Strand: Direct
Name: 13472153
Synonym: mlr2354
Alternate gene names: NA
Gene position: 1904700-1905761 (Clockwise)
Preceding gene: 13472152
Following gene: 13472157
Centisome position: 27.07
GC content: 62.05
Gene sequence:
>1062_bases ATGAGCAACTACGATATCTGGGCGGCCTGTGCGCTGTCTGCCGACGGCTTCGCAATTTCGACCGGCCTGCTCGAGGACGG GCCGCAGTTCAGCAGGCTTACGCTACACCGAGCGCCGGGGATGCCTGAATGGAACTATGTGCATTTCGAATCGACGCTCG TGTGGCTGACGAGACTCGACGGCTGGCGTCACGGCGCGTTGCTCGCGGCCCTCGGCATCGACGGCGATGTCAGCTTCGTC GGCCAGCAATTTGCCAGCGAGCAGATTCCGGAGGCGGGCGCCGGCGACGACGAAGAGGGCCGTGGCTCGATGAGCCAAAT TCGGCAATTGGGCGACGAACTGATTGCCTGCGGATATGGCTCGCAAGTCTATGTGCGCGACACACGGGACGCGTGGACAA GAATAGCCGACTCGGATGACGAGGCTTTGGGCGACAACGCATTCGAAGCCGTGGCGCGAAACGCGAATGGGGAGTGGGCG GCATGCGGCAACACCGCCGCAGCCTTCCGTGAGCCGACCGCCGCCGAGCAAGCCGAACTCGCCCGGATCGCAGAGACAGG CACGATGCCACAATACCTTGCCGCGAAGGAGCGCTTCGAGACCCAGGTGGCAGGCGAAATCGGCTGCCTGTACGTGCGGA ATAAACGCCGCTGGACAGGCGTGGACTTACCCGGCAACACCTATCTTGAGGATGTTATCGTGCTACAGGACGGTCGCTTT CTAGCGGCGGGCGGCGGTGGTCTGATCGTCGCAGGTCGGGATCCCGATGGCTTCGAGGATTTCTCGCAGCCGGGCTTCGC CGAGAACTACCATTCCATCTGCCTAGTCGGTGGCCGGCCCCACCTTCTTGGCGATACGGTGATCCATGTCCTCGGCAAGG ATTTGCAGTTGGAAGAGGAGATTGCCCTGCCGGACGAACTGCAAAGCCCGTTGCTCATTGATGTCGCGGATGGCGTGCTG TGGTATTTCGATCACAAGGGGGTCGCCAAACGGCGGCAAAACGCCTGGGTCATCACGGACCTGCCGGACGACGTATGGGA AGAAGTACGCCACGACGGATAA
Upstream 100 bases:
>100_bases CCAGGCAGACGGCAAACATCGGGCCGAACCAGGTCGGCCGCACGTCAGGTACGCTTCCTAACAAGGCGGCAGCGAGCAAA ATGCTGAACACGACAATATC
Downstream 100 bases:
>100_bases GCGGGCGCGGCAGCTTGCTTAGCGATCTATACCCCGTTCGCCCCGAGATATTCTCTGACCTTTTTGAGGTCCAGCTCTGT GATCGGGATCGGGCGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSNYDIWAACALSADGFAISTGLLEDGPQFSRLTLHRAPGMPEWNYVHFESTLVWLTRLDGWRHGALLAALGIDGDVSFV GQQFASEQIPEAGAGDDEEGRGSMSQIRQLGDELIACGYGSQVYVRDTRDAWTRIADSDDEALGDNAFEAVARNANGEWA ACGNTAAAFREPTAAEQAELARIAETGTMPQYLAAKERFETQVAGEIGCLYVRNKRRWTGVDLPGNTYLEDVIVLQDGRF LAAGGGGLIVAGRDPDGFEDFSQPGFAENYHSICLVGGRPHLLGDTVIHVLGKDLQLEEEIALPDELQSPLLIDVADGVL WYFDHKGVAKRRQNAWVITDLPDDVWEEVRHDG
Sequences:
>Translated_353_residues MSNYDIWAACALSADGFAISTGLLEDGPQFSRLTLHRAPGMPEWNYVHFESTLVWLTRLDGWRHGALLAALGIDGDVSFV GQQFASEQIPEAGAGDDEEGRGSMSQIRQLGDELIACGYGSQVYVRDTRDAWTRIADSDDEALGDNAFEAVARNANGEWA ACGNTAAAFREPTAAEQAELARIAETGTMPQYLAAKERFETQVAGEIGCLYVRNKRRWTGVDLPGNTYLEDVIVLQDGRF LAAGGGGLIVAGRDPDGFEDFSQPGFAENYHSICLVGGRPHLLGDTVIHVLGKDLQLEEEIALPDELQSPLLIDVADGVL WYFDHKGVAKRRQNAWVITDLPDDVWEEVRHDG >Mature_352_residues SNYDIWAACALSADGFAISTGLLEDGPQFSRLTLHRAPGMPEWNYVHFESTLVWLTRLDGWRHGALLAALGIDGDVSFVG QQFASEQIPEAGAGDDEEGRGSMSQIRQLGDELIACGYGSQVYVRDTRDAWTRIADSDDEALGDNAFEAVARNANGEWAA CGNTAAAFREPTAAEQAELARIAETGTMPQYLAAKERFETQVAGEIGCLYVRNKRRWTGVDLPGNTYLEDVIVLQDGRFL AAGGGGLIVAGRDPDGFEDFSQPGFAENYHSICLVGGRPHLLGDTVIHVLGKDLQLEEEIALPDELQSPLLIDVADGVLW YFDHKGVAKRRQNAWVITDLPDDVWEEVRHDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38570; Mature: 38439
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNYDIWAACALSADGFAISTGLLEDGPQFSRLTLHRAPGMPEWNYVHFESTLVWLTRLD CCCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEHHEEEEEECCC GWRHGALLAALGIDGDVSFVGQQFASEQIPEAGAGDDEEGRGSMSQIRQLGDELIACGYG CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCC SQVYVRDTRDAWTRIADSDDEALGDNAFEAVARNANGEWAACGNTAAAFREPTAAEQAEL CEEEEECCHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCEEECCCCHHHHCCCCHHHHHHH ARIAETGTMPQYLAAKERFETQVAGEIGCLYVRNKRRWTGVDLPGNTYLEDVIVLQDGRF HHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCCCCCCCEEEEEEEECCCE LAAGGGGLIVAGRDPDGFEDFSQPGFAENYHSICLVGGRPHLLGDTVIHVLGKDLQLEEE EEECCCEEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHH IALPDELQSPLLIDVADGVLWYFDHKGVAKRRQNAWVITDLPDDVWEEVRHDG CCCCHHHCCCEEEEECCCEEEEECCCCHHHHCCCCEEEECCCHHHHHHHHCCC >Mature Secondary Structure SNYDIWAACALSADGFAISTGLLEDGPQFSRLTLHRAPGMPEWNYVHFESTLVWLTRLD CCCCEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEHHEEEEEECCC GWRHGALLAALGIDGDVSFVGQQFASEQIPEAGAGDDEEGRGSMSQIRQLGDELIACGYG CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCC SQVYVRDTRDAWTRIADSDDEALGDNAFEAVARNANGEWAACGNTAAAFREPTAAEQAEL CEEEEECCHHHHHHHCCCCCHHHCCHHHHHHHHCCCCCEEECCCCHHHHCCCCHHHHHHH ARIAETGTMPQYLAAKERFETQVAGEIGCLYVRNKRRWTGVDLPGNTYLEDVIVLQDGRF HHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCEECCCCCCCCCEEEEEEEECCCE LAAGGGGLIVAGRDPDGFEDFSQPGFAENYHSICLVGGRPHLLGDTVIHVLGKDLQLEEE EEECCCEEEEECCCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCHHH IALPDELQSPLLIDVADGVLWYFDHKGVAKRRQNAWVITDLPDDVWEEVRHDG CCCCHHHCCCEEEEECCCEEEEECCCCHHHHCCCCEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA