Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13472157

Identifier: 13472157

GI number: 13472157

Start: 1909132

End: 1910211

Strand: Direct

Name: 13472157

Synonym: mlr2358

Alternate gene names: NA

Gene position: 1909132-1910211 (Clockwise)

Preceding gene: 13472153

Following gene: 13472158

Centisome position: 27.13

GC content: 63.06

Gene sequence:

>1080_bases
ATGTTCATTACACTCCAGATCAGCAATGTTGACAGGCTGCCACCAGGCATCGCGGCGAGCTATGCCGCGCGCGACCGCAG
CTTCGAAATCGGGCGCGAAAATTGTGACTGGACACTTTCCGATCCCGACAAGTTCATCTCGGGCCGGCACTGCGAAATCC
GCTATCAGGCCGGCACGTTCTGGCTTCATGATGTCTCGCGCAACGGCACCTTCGTCAACGGCTCCAGCCAGCGCATGAAT
GCGCCGCATCGGCTAACCCAAGGCGACCGGCTGCTGATCGGCCGCTACGTCGTCGCCGTTTCGGTCGACGAAGAGCGCGT
CGCCACCGGTCATCCGCAAGCCAGGACCGGTTCGACGCAACGCGAGTTGCCGCCCTCGACGGGGACACCGCTGAAACTCG
GCAGCGCGTTATTCCACAATTTGGGGGAGCAGCGCCCGGCCGAGGTAACGCCGGTGCCGGCGTCTTCTGTGCTGCAGTCC
AGCCCCGCTGTCCCGGCCAAGCAGCCAGGGGAAGCGGAGGGGATACTGCGCGATATCGCCAGGGCCGCCGGCTTATCGCC
GGAGTTGTTGCAGTCGCGCGACCCGCATGACGTCGCTGCCGAGATCGGTGCGGTGTTGAGAACCACGGTCGAGCAACTGT
CCTTGCTGCTCAAGGCGCGCGCCGCGGCCAAGGTGCTCGCCAAAAGCGCGCACCGCACCATGATCGGCGCCGAGGACAAC
AACCCGCTGAAATTTGTGCCGGGCACCGACGACATACTCGAGATCATGTTTGCCAAGCGCCGGGCCGGCTATCTCGATGC
CAGACACAGCATCGAGGATGCGTTCCGAGACCTGAAGACCCACGAAATCGCTACCTACGCAGCCATGCAGGCCGCGCTCT
CGAGGCTGCTCGACGACCTGTCGCCGGAGGCGATCGCCAAAAGAATCCCGCCTGCGTCCTTTTCGTCCAGGAAAAGCCAG
GCCTGGGACGCGCTCGTCGCAACGTGGCGGACGATGGAGGACAAGCACGAAAACGGCATGCTGGATGTCTTCCTCGCTTA
TTTCGCCGAAGCCTACGCCAAGGCTGACAAGCAGAAATAG

Upstream 100 bases:

>100_bases
ATGGTTAAACCGTAGCGTGCATTCAAGTGAAGCGCACCTCTCCCACTACGCTGGCAAGATGCTAGAATGTCTAGGATTTC
AGGTTTGCCAGTGGCGTCGA

Downstream 100 bases:

>100_bases
CCGCGCTCGGCAAATGTCGTCGGCAACGCTCCTACGGGCTGTGTGAGGGGCCTCGCAGAAGAAGCCGCTTCCTTGATCAT
CCTGCTTTCCGATTTCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion System FHA Domain Protein; FHA Domain-Containing Protein; Regulatory Protein; Protein ImpI/VasC

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MFITLQISNVDRLPPGIAASYAARDRSFEIGRENCDWTLSDPDKFISGRHCEIRYQAGTFWLHDVSRNGTFVNGSSQRMN
APHRLTQGDRLLIGRYVVAVSVDEERVATGHPQARTGSTQRELPPSTGTPLKLGSALFHNLGEQRPAEVTPVPASSVLQS
SPAVPAKQPGEAEGILRDIARAAGLSPELLQSRDPHDVAAEIGAVLRTTVEQLSLLLKARAAAKVLAKSAHRTMIGAEDN
NPLKFVPGTDDILEIMFAKRRAGYLDARHSIEDAFRDLKTHEIATYAAMQAALSRLLDDLSPEAIAKRIPPASFSSRKSQ
AWDALVATWRTMEDKHENGMLDVFLAYFAEAYAKADKQK

Sequences:

>Translated_359_residues
MFITLQISNVDRLPPGIAASYAARDRSFEIGRENCDWTLSDPDKFISGRHCEIRYQAGTFWLHDVSRNGTFVNGSSQRMN
APHRLTQGDRLLIGRYVVAVSVDEERVATGHPQARTGSTQRELPPSTGTPLKLGSALFHNLGEQRPAEVTPVPASSVLQS
SPAVPAKQPGEAEGILRDIARAAGLSPELLQSRDPHDVAAEIGAVLRTTVEQLSLLLKARAAAKVLAKSAHRTMIGAEDN
NPLKFVPGTDDILEIMFAKRRAGYLDARHSIEDAFRDLKTHEIATYAAMQAALSRLLDDLSPEAIAKRIPPASFSSRKSQ
AWDALVATWRTMEDKHENGMLDVFLAYFAEAYAKADKQK
>Mature_359_residues
MFITLQISNVDRLPPGIAASYAARDRSFEIGRENCDWTLSDPDKFISGRHCEIRYQAGTFWLHDVSRNGTFVNGSSQRMN
APHRLTQGDRLLIGRYVVAVSVDEERVATGHPQARTGSTQRELPPSTGTPLKLGSALFHNLGEQRPAEVTPVPASSVLQS
SPAVPAKQPGEAEGILRDIARAAGLSPELLQSRDPHDVAAEIGAVLRTTVEQLSLLLKARAAAKVLAKSAHRTMIGAEDN
NPLKFVPGTDDILEIMFAKRRAGYLDARHSIEDAFRDLKTHEIATYAAMQAALSRLLDDLSPEAIAKRIPPASFSSRKSQ
AWDALVATWRTMEDKHENGMLDVFLAYFAEAYAKADKQK

Specific function: Unknown

COG id: COG3456

COG function: function code T; Uncharacterized conserved protein, contains FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39375; Mature: 39375

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFITLQISNVDRLPPGIAASYAARDRSFEIGRENCDWTLSDPDKFISGRHCEIRYQAGTF
CEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCHHHHHCCCCEEEEEECCEE
WLHDVSRNGTFVNGSSQRMNAPHRLTQGDRLLIGRYVVAVSVDEERVATGHPQARTGSTQ
EEEEECCCCCEECCCHHHCCCCCCCCCCCEEEEEEEEEEEECCHHHHHCCCCCCCCCCCC
RELPPSTGTPLKLGSALFHNLGEQRPAEVTPVPASSVLQSSPAVPAKQPGEAEGILRDIA
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHH
RAAGLSPELLQSRDPHDVAAEIGAVLRTTVEQLSLLLKARAAAKVLAKSAHRTMIGAEDN
HHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
NPLKFVPGTDDILEIMFAKRRAGYLDARHSIEDAFRDLKTHEIATYAAMQAALSRLLDDL
CCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPEAIAKRIPPASFSSRKSQAWDALVATWRTMEDKHENGMLDVFLAYFAEAYAKADKQK
CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFITLQISNVDRLPPGIAASYAARDRSFEIGRENCDWTLSDPDKFISGRHCEIRYQAGTF
CEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCHHHHHCCCCEEEEEECCEE
WLHDVSRNGTFVNGSSQRMNAPHRLTQGDRLLIGRYVVAVSVDEERVATGHPQARTGSTQ
EEEEECCCCCEECCCHHHCCCCCCCCCCCEEEEEEEEEEEECCHHHHHCCCCCCCCCCCC
RELPPSTGTPLKLGSALFHNLGEQRPAEVTPVPASSVLQSSPAVPAKQPGEAEGILRDIA
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHH
RAAGLSPELLQSRDPHDVAAEIGAVLRTTVEQLSLLLKARAAAKVLAKSAHRTMIGAEDN
HHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
NPLKFVPGTDDILEIMFAKRRAGYLDARHSIEDAFRDLKTHEIATYAAMQAALSRLLDDL
CCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPEAIAKRIPPASFSSRKSQAWDALVATWRTMEDKHENGMLDVFLAYFAEAYAKADKQK
CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA