| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472152
Identifier: 13472152
GI number: 13472152
Start: 1903654
End: 1904703
Strand: Direct
Name: 13472152
Synonym: mlr2353
Alternate gene names: NA
Gene position: 1903654-1904703 (Clockwise)
Preceding gene: 13472151
Following gene: 13472153
Centisome position: 27.06
GC content: 61.14
Gene sequence:
>1050_bases ATGACCGTGTTCGCGAATGGGCTCGAGATCGCTTGCAAGGCGCAGACCAATCAGGTGATCGCGGCTTTTCCAGATGTCTG CTTCACGCCACCGCAGACGCCGGCCACGCCGCCCGGCGTGCCGATTCCCTACCCAAGCTTCGGCACGGATTCCGACACGG ACAAAGGGACGAGCACAGTCAAGATCGGCGGCAAGACCGTCACGCAGAAGAACCAGTCCTACTACACCAAGACCATGGGG ACCGAAGCGGGGTGTGCGCCGAAAAAGGGCGTCGTCAGCTCGCAAAACACCGGCAAGGAGTACGCCGAAGCTTGGTCCGG CAACGTCAAGATGGATGGAGAGCCGATCAGCCGGTTTACCGACATCTCAACGAATAACCATGCCTCGCCGGTCGGCAATG CACCGCCCTGGCCGAAGGTCGCGGCCGCCGACCTGAAACCCGGCCAGGACGCGGACTGCCTCGTCGGTTCCTATGATGAC ATCGCCGCTGCCTGCGCGAACGCGAAGCCTCCCGGCGAGGCGCATCATATCGTTCCGGACAAGGCCTACCGCACGGGCAC GCGGGACCAGGCGATCGCCGCTGGGGCGGCTGGCGCCTCGACCATCACGCGGACCTTCGGCAGGCAGAAGCGGAACATCG GCGAGCGCGTGAAAAACGCGCCCTCGATCGGTGAAGGCGTCTGCATCTGTATCAGCAAGTCGGCGCACAAGAAGATCCAC AAGAAGGAGCGGGCAGCGCTCAAGAAGCTCGGTCAAAAGGTACCGGCCAATCTGAAAGGCGCGGCCAAGAAGGCGCATAT TGAGACTATGAAAAGCAACGGCACCTGGAACACCGCGAACCTCGGTGACATTATCGCTGAGTCGAAGAAGACGATAAGCG ACATCAAGCAGGATAAGAACGGTAATCCAACGGCCGCGTGCATCGCGAAGGCAAAGGCCGCGGTAACCAGGCAGACGGCA AACATCGGGCCGAACCAGGTCGGCCGCACGTCAGGTACGCTTCCTAACAAGGCGGCAGCGAGCAAAATGCTGAACACGAC AATATCATGA
Upstream 100 bases:
>100_bases ACCGAGGCGATCCGGTGCTGATCGAGTCTTCGGGCGACGACGGTGCCTGCGGTGCGATGCTGTTGACCGCGGGCCGAATG CCGCGGAGGCGGGTCGCCGC
Downstream 100 bases:
>100_bases GCAACTACGATATCTGGGCGGCCTGTGCGCTGTCTGCCGACGGCTTCGCAATTTCGACCGGCCTGCTCGAGGACGGGCCG CAGTTCAGCAGGCTTACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MTVFANGLEIACKAQTNQVIAAFPDVCFTPPQTPATPPGVPIPYPSFGTDSDTDKGTSTVKIGGKTVTQKNQSYYTKTMG TEAGCAPKKGVVSSQNTGKEYAEAWSGNVKMDGEPISRFTDISTNNHASPVGNAPPWPKVAAADLKPGQDADCLVGSYDD IAAACANAKPPGEAHHIVPDKAYRTGTRDQAIAAGAAGASTITRTFGRQKRNIGERVKNAPSIGEGVCICISKSAHKKIH KKERAALKKLGQKVPANLKGAAKKAHIETMKSNGTWNTANLGDIIAESKKTISDIKQDKNGNPTAACIAKAKAAVTRQTA NIGPNQVGRTSGTLPNKAAASKMLNTTIS
Sequences:
>Translated_349_residues MTVFANGLEIACKAQTNQVIAAFPDVCFTPPQTPATPPGVPIPYPSFGTDSDTDKGTSTVKIGGKTVTQKNQSYYTKTMG TEAGCAPKKGVVSSQNTGKEYAEAWSGNVKMDGEPISRFTDISTNNHASPVGNAPPWPKVAAADLKPGQDADCLVGSYDD IAAACANAKPPGEAHHIVPDKAYRTGTRDQAIAAGAAGASTITRTFGRQKRNIGERVKNAPSIGEGVCICISKSAHKKIH KKERAALKKLGQKVPANLKGAAKKAHIETMKSNGTWNTANLGDIIAESKKTISDIKQDKNGNPTAACIAKAKAAVTRQTA NIGPNQVGRTSGTLPNKAAASKMLNTTIS >Mature_348_residues TVFANGLEIACKAQTNQVIAAFPDVCFTPPQTPATPPGVPIPYPSFGTDSDTDKGTSTVKIGGKTVTQKNQSYYTKTMGT EAGCAPKKGVVSSQNTGKEYAEAWSGNVKMDGEPISRFTDISTNNHASPVGNAPPWPKVAAADLKPGQDADCLVGSYDDI AAACANAKPPGEAHHIVPDKAYRTGTRDQAIAAGAAGASTITRTFGRQKRNIGERVKNAPSIGEGVCICISKSAHKKIHK KERAALKKLGQKVPANLKGAAKKAHIETMKSNGTWNTANLGDIIAESKKTISDIKQDKNGNPTAACIAKAKAAVTRQTAN IGPNQVGRTSGTLPNKAAASKMLNTTIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36395; Mature: 36264
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFANGLEIACKAQTNQVIAAFPDVCFTPPQTPATPPGVPIPYPSFGTDSDTDKGTSTV CEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KIGGKTVTQKNQSYYTKTMGTEAGCAPKKGVVSSQNTGKEYAEAWSGNVKMDGEPISRFT EECCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHH DISTNNHASPVGNAPPWPKVAAADLKPGQDADCLVGSYDDIAAACANAKPPGEAHHIVPD CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCC KAYRTGTRDQAIAAGAAGASTITRTFGRQKRNIGERVKNAPSIGEGVCICISKSAHKKIH HHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHH KKERAALKKLGQKVPANLKGAAKKAHIETMKSNGTWNTANLGDIIAESKKTISDIKQDKN HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC GNPTAACIAKAKAAVTRQTANIGPNQVGRTSGTLPNKAAASKMLNTTIS CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TVFANGLEIACKAQTNQVIAAFPDVCFTPPQTPATPPGVPIPYPSFGTDSDTDKGTSTV EEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KIGGKTVTQKNQSYYTKTMGTEAGCAPKKGVVSSQNTGKEYAEAWSGNVKMDGEPISRFT EECCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHH DISTNNHASPVGNAPPWPKVAAADLKPGQDADCLVGSYDDIAAACANAKPPGEAHHIVPD CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCC KAYRTGTRDQAIAAGAAGASTITRTFGRQKRNIGERVKNAPSIGEGVCICISKSAHKKIH HHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHH KKERAALKKLGQKVPANLKGAAKKAHIETMKSNGTWNTANLGDIIAESKKTISDIKQDKN HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC GNPTAACIAKAKAAVTRQTANIGPNQVGRTSGTLPNKAAASKMLNTTIS CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA