Click here to switch to the map view.

The map label for this gene is 13472146

Identifier: 13472146

GI number: 13472146

Start: 1894779

End: 1896113

Strand: Direct

Name: 13472146

Synonym: mlr2347

Alternate gene names: NA

Gene position: 1894779-1896113 (Clockwise)

Preceding gene: 13472145

Following gene: 13472147

Centisome position: 26.93

GC content: 65.69

Gene sequence:

>1335_bases
ATGAGCGATGCAAACAGGGTGCTGTGGTCGGAGGGCCTGTTTCTCAGGACCCAGCACTTCCAGCAGCAGGATCGGTTCTT
CGAGGGCATGGTGCGCGGTGCATTGCAGGCCGGCCAGCTCCATACTTTCGGCTTCCAGCAACTGACCCTCGACCAGTCGC
TGCTCGACGCCGGCCAGGTCTCGATCGTGTCCGCCCGGGGCATTTTCCCGGACGGCACGCCTTTCTCCATCCCGGAACTG
ATGGATGCGCCCAAGCCGCTGCCGGTCACGGCCGACACCGGCGCCGGTCCGGTGCTGGTCGCATTGCCGCTCGAGCCACC
CGGTGGCGTCGGGTTCGATCCGGCGCATGCGGCATCGACGGGCGCGCGCTACCACGGCAAGATCGTTTCGGTGCGCGACG
CCGTCCAGAGCGGCGCCGATCCGGAAGAGATCGAGATCGCCCGCCCGCAAGCCGCCCTGCTTGCGCCCGGCAAATCGGTC
GGCGGTTATACGGCCTTGCCGATCGCCGACATAAAGGGTGTGCGCGCCGACGGCGGCATCTCGCTCGATGAGACGTTCCT
GCCGCCGACGCTGATCACCGGCGCAGTCCACTGGTACCGGCAATTGTTGCAGGAGGTCGTCACCGGCCTCGACCAGATCG
CCGAAGCGCATGGCAAGATGGTGATGGGCGGCGCCGGCCGCAGCGTCGAAGACCTTTTGATGCTGCACCTCGCCAATGCC
GCTCGCCCGCGGCTTGCCCATATGCTCGCGCAGGATGTCTTTCATCCGGCCGAACTCTATCTCGAACTGGCCGGACTGGC
CGGCGAGATGGCAACCTACGGCTCGAGCTCGCGGCGGCTCGGCGAATTGCCGGCCTACGATCACATGGCGCCCGGCCCCG
CCTATATGGCGCTGGCCGATGCCTTGCGCTCGCTCATTCTCAGCCTGCGCTACATCGAGCCGAAATCGCGCGCGCTGCCG
GTCATGCGGCACGCGACCAATGTCTGGAAAGTGCGCATCGACAACCCGAAGCTCTTGGTCGCCAGCCGCATCGTCATCCG
CGTCGGATCGGAACTGTCGGAAGACGCGCTGCGCAAGATCTTCGTCAACCAGGCGACGGTCGGCGCCGCTGACCAGTTCG
AAGGTCTTTGGAAGTCGCGCCTGCCGGGTATTCCGCTGAAACCGCTTCATTCGCAGCCACGCGAGATCCCCTACGATGGC
GACCGGCTGTGCCTGGAGCTTGACCAGAAGAGCGAGCATTGGGCCTCGTTGCTCGACGCCCCCGGCTTCGTCATCGGCGT
TTCAGGTGTCCTGCCGAGCGAGCCGCAGGTCGACTGCTACTCAGTGAACAGGTGA

Upstream 100 bases:

>100_bases
TCGCCAGGGTCGAAATTCACCATCAATGTCAGCCTCGGCAAGGGCGGCATTTCCGCCTAGCGACAGGGGCCACGGATGGG
CGTGTGCAGAAAGTAGTGGC

Downstream 100 bases:

>100_bases
GGCCATGAGCCGGGATGATCCTTTCGGACTGTCGGAGGATCGCGAACGCACACGCATCAGGCTGGCGGGCGCCGCGCCAC
GGCCGATGGCGCCGCTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MSDANRVLWSEGLFLRTQHFQQQDRFFEGMVRGALQAGQLHTFGFQQLTLDQSLLDAGQVSIVSARGIFPDGTPFSIPEL
MDAPKPLPVTADTGAGPVLVALPLEPPGGVGFDPAHAASTGARYHGKIVSVRDAVQSGADPEEIEIARPQAALLAPGKSV
GGYTALPIADIKGVRADGGISLDETFLPPTLITGAVHWYRQLLQEVVTGLDQIAEAHGKMVMGGAGRSVEDLLMLHLANA
ARPRLAHMLAQDVFHPAELYLELAGLAGEMATYGSSSRRLGELPAYDHMAPGPAYMALADALRSLILSLRYIEPKSRALP
VMRHATNVWKVRIDNPKLLVASRIVIRVGSELSEDALRKIFVNQATVGAADQFEGLWKSRLPGIPLKPLHSQPREIPYDG
DRLCLELDQKSEHWASLLDAPGFVIGVSGVLPSEPQVDCYSVNR

Sequences:

>Translated_444_residues
MSDANRVLWSEGLFLRTQHFQQQDRFFEGMVRGALQAGQLHTFGFQQLTLDQSLLDAGQVSIVSARGIFPDGTPFSIPEL
MDAPKPLPVTADTGAGPVLVALPLEPPGGVGFDPAHAASTGARYHGKIVSVRDAVQSGADPEEIEIARPQAALLAPGKSV
GGYTALPIADIKGVRADGGISLDETFLPPTLITGAVHWYRQLLQEVVTGLDQIAEAHGKMVMGGAGRSVEDLLMLHLANA
ARPRLAHMLAQDVFHPAELYLELAGLAGEMATYGSSSRRLGELPAYDHMAPGPAYMALADALRSLILSLRYIEPKSRALP
VMRHATNVWKVRIDNPKLLVASRIVIRVGSELSEDALRKIFVNQATVGAADQFEGLWKSRLPGIPLKPLHSQPREIPYDG
DRLCLELDQKSEHWASLLDAPGFVIGVSGVLPSEPQVDCYSVNR
>Mature_443_residues
SDANRVLWSEGLFLRTQHFQQQDRFFEGMVRGALQAGQLHTFGFQQLTLDQSLLDAGQVSIVSARGIFPDGTPFSIPELM
DAPKPLPVTADTGAGPVLVALPLEPPGGVGFDPAHAASTGARYHGKIVSVRDAVQSGADPEEIEIARPQAALLAPGKSVG
GYTALPIADIKGVRADGGISLDETFLPPTLITGAVHWYRQLLQEVVTGLDQIAEAHGKMVMGGAGRSVEDLLMLHLANAA
RPRLAHMLAQDVFHPAELYLELAGLAGEMATYGSSSRRLGELPAYDHMAPGPAYMALADALRSLILSLRYIEPKSRALPV
MRHATNVWKVRIDNPKLLVASRIVIRVGSELSEDALRKIFVNQATVGAADQFEGLWKSRLPGIPLKPLHSQPREIPYDGD
RLCLELDQKSEHWASLLDAPGFVIGVSGVLPSEPQVDCYSVNR

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47879; Mature: 47747

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDANRVLWSEGLFLRTQHFQQQDRFFEGMVRGALQAGQLHTFGFQQLTLDQSLLDAGQV
CCCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCE
SIVSARGIFPDGTPFSIPELMDAPKPLPVTADTGAGPVLVALPLEPPGGVGFDPAHAAST
EEEEECCCCCCCCCCCCHHHHCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCHHHHCC
GARYHGKIVSVRDAVQSGADPEEIEIARPQAALLAPGKSVGGYTALPIADIKGVRADGGI
CCHHCCEEEEHHHHHHCCCCCCCEEEECCCEEEECCCCCCCCEEECCHHHCCCCCCCCCC
SLDETFLPPTLITGAVHWYRQLLQEVVTGLDQIAEAHGKMVMGGAGRSVEDLLMLHLANA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHC
ARPRLAHMLAQDVFHPAELYLELAGLAGEMATYGSSSRRLGELPAYDHMAPGPAYMALAD
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ALRSLILSLRYIEPKSRALPVMRHATNVWKVRIDNPKLLVASRIVIRVGSELSEDALRKI
HHHHHHHHHHCCCCHHHCCHHHHHCCCEEEEEECCCCEEHHHHHHHHHCCHHHHHHHHHH
FVNQATVGAADQFEGLWKSRLPGIPLKPLHSQPREIPYDGDRLCLELDQKSEHWASLLDA
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCC
PGFVIGVSGVLPSEPQVDCYSVNR
CCEEEEECCCCCCCCCCCEEECCC
>Mature Secondary Structure 
SDANRVLWSEGLFLRTQHFQQQDRFFEGMVRGALQAGQLHTFGFQQLTLDQSLLDAGQV
CCCCCCHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCE
SIVSARGIFPDGTPFSIPELMDAPKPLPVTADTGAGPVLVALPLEPPGGVGFDPAHAAST
EEEEECCCCCCCCCCCCHHHHCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCCHHHHCC
GARYHGKIVSVRDAVQSGADPEEIEIARPQAALLAPGKSVGGYTALPIADIKGVRADGGI
CCHHCCEEEEHHHHHHCCCCCCCEEEECCCEEEECCCCCCCCEEECCHHHCCCCCCCCCC
SLDETFLPPTLITGAVHWYRQLLQEVVTGLDQIAEAHGKMVMGGAGRSVEDLLMLHLANA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHC
ARPRLAHMLAQDVFHPAELYLELAGLAGEMATYGSSSRRLGELPAYDHMAPGPAYMALAD
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ALRSLILSLRYIEPKSRALPVMRHATNVWKVRIDNPKLLVASRIVIRVGSELSEDALRKI
HHHHHHHHHHCCCCHHHCCHHHHHCCCEEEEEECCCCEEHHHHHHHHHCCHHHHHHHHHH
FVNQATVGAADQFEGLWKSRLPGIPLKPLHSQPREIPYDGDRLCLELDQKSEHWASLLDA
HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCC
PGFVIGVSGVLPSEPQVDCYSVNR
CCEEEEECCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA