Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472145

Identifier: 13472145

GI number: 13472145

Start: 1894286

End: 1894738

Strand: Direct

Name: 13472145

Synonym: mlr2346

Alternate gene names: NA

Gene position: 1894286-1894738 (Clockwise)

Preceding gene: 13472144

Following gene: 13472146

Centisome position: 26.92

GC content: 67.11

Gene sequence:

>453_bases
ATGATCGACAGACGCGAATTCGTCGTTGCCCTCGGCGCCACGGGGCTGCTTGCGGCTTGCCAGAGCGGCCCACCGAAACC
ATCGGTTATCTCGGTCAACGTGACCGGCGGCGCCGGCATGAATCCAGGACCGGGCGGCGGCGACAGGCCGGTGACGGTAC
TGGTGATGCGGCTTGCCAGCACCGGCAAGTTCAACTCGGCCGACTATTTCGCGCTGCAGGGCGATGCGGGCTCGGCGCTC
GGTGCCGACCTCATCGGCTCCGACGCGATCTCGGTCGCGCCGGGCAAGACGGCGGCCAAGACCATCACGGTCGAGCCGAA
CGCCACGGCACTCGGCTTCGTGGCGCTGATCCGCGAGCCGGGCGGACGCAACTGGCGCACGACCAAGTCGGTATCGCCAG
GGTCGAAATTCACCATCAATGTCAGCCTCGGCAAGGGCGGCATTTCCGCCTAG

Upstream 100 bases:

>100_bases
CCAGAAACGCCATCGCGACATCGCCCAGAGCGCGGAATCGAGCTTCCTGGGCGAGATCGGCGCAGACTTCAGGGACGCAT
ATGAAGAGGAGGAGTAGGAC

Downstream 100 bases:

>100_bases
CGACAGGGGCCACGGATGGGCGTGTGCAGAAAGTAGTGGCATGAGCGATGCAAACAGGGTGCTGTGGTCGGAGGGCCTGT
TTCTCAGGACCCAGCACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIDRREFVVALGATGLLAACQSGPPKPSVISVNVTGGAGMNPGPGGGDRPVTVLVMRLASTGKFNSADYFALQGDAGSAL
GADLIGSDAISVAPGKTAAKTITVEPNATALGFVALIREPGGRNWRTTKSVSPGSKFTINVSLGKGGISA

Sequences:

>Translated_150_residues
MIDRREFVVALGATGLLAACQSGPPKPSVISVNVTGGAGMNPGPGGGDRPVTVLVMRLASTGKFNSADYFALQGDAGSAL
GADLIGSDAISVAPGKTAAKTITVEPNATALGFVALIREPGGRNWRTTKSVSPGSKFTINVSLGKGGISA
>Mature_150_residues
MIDRREFVVALGATGLLAACQSGPPKPSVISVNVTGGAGMNPGPGGGDRPVTVLVMRLASTGKFNSADYFALQGDAGSAL
GADLIGSDAISVAPGKTAAKTITVEPNATALGFVALIREPGGRNWRTTKSVSPGSKFTINVSLGKGGISA

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14926; Mature: 14926

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRREFVVALGATGLLAACQSGPPKPSVISVNVTGGAGMNPGPGGGDRPVTVLVMRLAS
CCCCCEEEEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHEEEEHHC
TGKFNSADYFALQGDAGSALGADLIGSDAISVAPGKTAAKTITVEPNATALGFVALIREP
CCCCCCCCEEEEECCCCCCCCCHHCCCCCEEECCCCCCEEEEEECCCCCCEEEEEEEECC
GGRNWRTTKSVSPGSKFTINVSLGKGGISA
CCCCCEEECCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MIDRREFVVALGATGLLAACQSGPPKPSVISVNVTGGAGMNPGPGGGDRPVTVLVMRLAS
CCCCCEEEEEECCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHEEEEHHC
TGKFNSADYFALQGDAGSALGADLIGSDAISVAPGKTAAKTITVEPNATALGFVALIREP
CCCCCCCCEEEEECCCCCCCCCHHCCCCCEEECCCCCCEEEEEECCCCCCEEEEEEEECC
GGRNWRTTKSVSPGSKFTINVSLGKGGISA
CCCCCEEECCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA