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The map label for this gene is ugpB [C]

Identifier: 13472067

GI number: 13472067

Start: 1805895

End: 1807142

Strand: Direct

Name: ugpB [C]

Synonym: mlr2244

Alternate gene names: 13472067

Gene position: 1805895-1807142 (Clockwise)

Preceding gene: 13472066

Following gene: 13472068

Centisome position: 25.67

GC content: 63.62

Gene sequence:

>1248_bases
ATGAGGAACGTGATTGCCAAACTGGCCCTGGCCGCTGCCGTACTGGGCAGTGGTCTCGGCACTGCCGCCGCCGACACCGC
CAACATCTGGGTGCGTGCCGACGGCTCGAATTTCATGCCGCGCATCGTCGACGCCTACAACAAGGCGCATAAGGACCAGA
TCAGGCTCGACATCATCCCCAACGCCGAGATCATCCCGAAATATGGCGCGGCCGCCGCCGGCGGCACGGCGCCCGACGCA
CTGTCGCTCGACCTGATCTACACGCCCTCCTTCGCCGCCGCCGGCCAGCTGGAGGACATCACCGACTGGGCCAAATCCCT
GCCCTATTTCGCCAGCCTGTCGCCGGCGCATGTCAAGACCGGCACCTACAAGGACCACATTTACGGCCTGCCCTTCTCGG
CCGACGCCTCGGTGCTGATCTGGAACAAGAAACTGTTCAAGCAGGCCGGCCTCGACCCTGAAAAAGGCCCCACCAACTGG
GCCGAAATCGCCGCCGATGCCGAGAAGGTCAATGCGCTTGGCGGCAACATCAAGGGTTTCTACTTCTCCGGCAATTGCGG
CGGTTGCAACATCTTCACCTTCACCCCGCTGATCTGGGCCTCGGGCGGCGATATCCTCTCGGCGGACGGCTCCAAGGCGA
CGCTGGACAGCCCGCAATTGCGCGGCGCCATCGATCTCTACCGCTCGATGGTCAAGAAGGACCTGGTGCCGGCAGGCGCG
CAGACCGACACCGGCGCCAACTTCTTTGCCGCCTTTGCCGCCGGCAATATCGGCATCTCGCCCTCCGGCGCCTTCGCCAT
CGGCGCGCTCAACACCCAGTATCCCAATGTCGACTACGGCATCACCTTCCTGCCGGGCAAGGATGGCGGCTGGTCGTCCT
TCGCCGGCGGCGACAATTTCGTCGTCACCAAGGGCACCAAGAAGCTCGCCGTGGTGAAGGAGTTCCTGGACTTCGCCTAT
TCGCTCGAAGGCCAGACCATCCTCGCCAAATACGGCAGCCTGCCGGTGCGCGGCGACATCGCCAAGGACGCGCTGAAGGA
TCTCGACCCGCGCTACCAGGTCGCCGCCGAGGCCATGGCCAAGGGCAAGACGCCCTATTCGGTGGTGTTCAACGACCTGA
TCAACTCCGCCAACGGCCCGTGGACGCAGATGATCAACGAGGTCTTCTTCGGTGACGATGTCGATGGCGCCATAGCGAAT
GCGCAGGAGACCATGCAGTCGATCATCGACCAGGCGCCGCAGAAGTAG

Upstream 100 bases:

>100_bases
TGGTACGGCGTTCCTGCGGCCATCCGCTGGATGGCTGAAACGACGCGCCGCGTGATCGGCGCCAAGCCGCGGATAGCGGC
CAACCCTGGAGGAGGAGAAG

Downstream 100 bases:

>100_bases
CGGCCGCCTGCCGGCCGCCCGCCTGTCTCCCTGGGCGGGTGGTCGGCGTGCTCCTTACCCTCCCCCTTGTGGGGAGGGTC
GCTGCGAAGCAGCGGGGTGG

Product: sugar binding protein of sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRNVIAKLALAAAVLGSGLGTAAADTANIWVRADGSNFMPRIVDAYNKAHKDQIRLDIIPNAEIIPKYGAAAAGGTAPDA
LSLDLIYTPSFAAAGQLEDITDWAKSLPYFASLSPAHVKTGTYKDHIYGLPFSADASVLIWNKKLFKQAGLDPEKGPTNW
AEIAADAEKVNALGGNIKGFYFSGNCGGCNIFTFTPLIWASGGDILSADGSKATLDSPQLRGAIDLYRSMVKKDLVPAGA
QTDTGANFFAAFAAGNIGISPSGAFAIGALNTQYPNVDYGITFLPGKDGGWSSFAGGDNFVVTKGTKKLAVVKEFLDFAY
SLEGQTILAKYGSLPVRGDIAKDALKDLDPRYQVAAEAMAKGKTPYSVVFNDLINSANGPWTQMINEVFFGDDVDGAIAN
AQETMQSIIDQAPQK

Sequences:

>Translated_415_residues
MRNVIAKLALAAAVLGSGLGTAAADTANIWVRADGSNFMPRIVDAYNKAHKDQIRLDIIPNAEIIPKYGAAAAGGTAPDA
LSLDLIYTPSFAAAGQLEDITDWAKSLPYFASLSPAHVKTGTYKDHIYGLPFSADASVLIWNKKLFKQAGLDPEKGPTNW
AEIAADAEKVNALGGNIKGFYFSGNCGGCNIFTFTPLIWASGGDILSADGSKATLDSPQLRGAIDLYRSMVKKDLVPAGA
QTDTGANFFAAFAAGNIGISPSGAFAIGALNTQYPNVDYGITFLPGKDGGWSSFAGGDNFVVTKGTKKLAVVKEFLDFAY
SLEGQTILAKYGSLPVRGDIAKDALKDLDPRYQVAAEAMAKGKTPYSVVFNDLINSANGPWTQMINEVFFGDDVDGAIAN
AQETMQSIIDQAPQK
>Mature_415_residues
MRNVIAKLALAAAVLGSGLGTAAADTANIWVRADGSNFMPRIVDAYNKAHKDQIRLDIIPNAEIIPKYGAAAAGGTAPDA
LSLDLIYTPSFAAAGQLEDITDWAKSLPYFASLSPAHVKTGTYKDHIYGLPFSADASVLIWNKKLFKQAGLDPEKGPTNW
AEIAADAEKVNALGGNIKGFYFSGNCGGCNIFTFTPLIWASGGDILSADGSKATLDSPQLRGAIDLYRSMVKKDLVPAGA
QTDTGANFFAAFAAGNIGISPSGAFAIGALNTQYPNVDYGITFLPGKDGGWSSFAGGDNFVVTKGTKKLAVVKEFLDFAY
SLEGQTILAKYGSLPVRGDIAKDALKDLDPRYQVAAEAMAKGKTPYSVVFNDLINSANGPWTQMINEVFFGDDVDGAIAN
AQETMQSIIDQAPQK

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=306, Percent_Identity=27.1241830065359, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43789; Mature: 43789

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNVIAKLALAAAVLGSGLGTAAADTANIWVRADGSNFMPRIVDAYNKAHKDQIRLDIIP
CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECC
NAEIIPKYGAAAAGGTAPDALSLDLIYTPSFAAAGQLEDITDWAKSLPYFASLSPAHVKT
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHCCCCCCEEC
GTYKDHIYGLPFSADASVLIWNKKLFKQAGLDPEKGPTNWAEIAADAEKVNALGGNIKGF
CCCCCCEEECCCCCCCCEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
YFSGNCGGCNIFTFTPLIWASGGDILSADGSKATLDSPQLRGAIDLYRSMVKKDLVPAGA
EEECCCCCEEEEEECCEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
QTDTGANFFAAFAAGNIGISPSGAFAIGALNTQYPNVDYGITFLPGKDGGWSSFAGGDNF
CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCE
VVTKGTKKLAVVKEFLDFAYSLEGQTILAKYGSLPVRGDIAKDALKDLDPRYQVAAEAMA
EEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
KGKTPYSVVFNDLINSANGPWTQMINEVFFGDDVDGAIANAQETMQSIIDQAPQK
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNVIAKLALAAAVLGSGLGTAAADTANIWVRADGSNFMPRIVDAYNKAHKDQIRLDIIP
CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECC
NAEIIPKYGAAAAGGTAPDALSLDLIYTPSFAAAGQLEDITDWAKSLPYFASLSPAHVKT
CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHCCCCCCEEC
GTYKDHIYGLPFSADASVLIWNKKLFKQAGLDPEKGPTNWAEIAADAEKVNALGGNIKGF
CCCCCCEEECCCCCCCCEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
YFSGNCGGCNIFTFTPLIWASGGDILSADGSKATLDSPQLRGAIDLYRSMVKKDLVPAGA
EEECCCCCEEEEEECCEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
QTDTGANFFAAFAAGNIGISPSGAFAIGALNTQYPNVDYGITFLPGKDGGWSSFAGGDNF
CCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCE
VVTKGTKKLAVVKEFLDFAYSLEGQTILAKYGSLPVRGDIAKDALKDLDPRYQVAAEAMA
EEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
KGKTPYSVVFNDLINSANGPWTQMINEVFFGDDVDGAIANAQETMQSIIDQAPQK
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA