| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471955
Identifier: 13471955
GI number: 13471955
Start: 1712572
End: 1714173
Strand: Direct
Name: 13471955
Synonym: mlr2091
Alternate gene names: NA
Gene position: 1712572-1714173 (Clockwise)
Preceding gene: 13471952
Following gene: 13471956
Centisome position: 24.34
GC content: 67.1
Gene sequence:
>1602_bases GTGCGGCCATCTCTCCTGCCCTATTTTCGAACACCAGCCCGATACCGATCACGATGCTGGGGGTGCGACATGCAAGTGAG CCTGCGACTGGACAGCGAATGCGTCCGTGCTTTTCACCTGCTGCTGTTGGAGCGCCTGGCGGCACTGGCGCAGGTCGAGG TGTCCGTCGATGCCAGGCCGGCTGGAAGCGGCATTCCAGGCAGCGCCGCGGCATTGTTCCAGCTTGAGACAGCCATCCAC GGCCTGCCGGCGGACGGGCTGGCCAAGCGCCTGCCCCTATCGGCGCTGGCGCCCTACCGGACGCAGCCGCCCGCTTCTCC CGATCTGGTGATCGACCTCTGCGGCGACGTGAGCCTGGAGGGAACGCGGGTCTGGCGCGTCACCTATGACGGCGCCGCCG GTGAAGCGGCCTTGCTGGCGCTGATCCTCGACGGCCGCACGCCGATTTCCCGCATTGAGGAGCGCGCCGCCACCGTCGCC GAAGGACGCCTGGGCACCGAATATGGCGGCATCGCGCTCGCCTCCTTCCAGGACATGCTGGCGCGCACCGCAAGCCTGAT CCTCGCGGCAATGCCCCCCTCGGCAACGAATGGCGCGGCGCGGGCCGCCCTGCCGGTGCTGCCCGAACCGGCGCAGGCCG TCGCCCCGCCGCAGATACCCTCGCCCGCCAAACTCGGCATCAGGGCGGGCAAGGCGCTGGCGCGGCGCATCGTCCAGAAG ATCTACCATCTCTGCTACAACGCCCCGCACTGGAAGGTCGGCTGGCGCGAGACCAAGGGGCTGGATCTGTTCGACCTGCG CGCCCATCCGGCAACCGGCTGGCAGGTGCTGCCCGACGATGGCAGCCGCTTCTACGCCGATCCATTTCCGATCCTGTACC AGGGGCAAGTGACCCTTTTCGTCGAGGATTATATCCACCGCCTGGGTCGGGCCATCATCTCCGCCGTGCCATTCGGTCCG TCCGGGCCGATCGGGCGTCCCGAGCCGGTGCTCGACCTGCCCTACCACCTCTCCTATCCCTTCGTCTTCGAGCGCGACGG CGAGGTCTGGATGGTGCCGGAAAGCTGCGCAAACCGCACCGTCGATCTCTACCGCGCCACCGCCTTCCCCGGCGGATGGG TCAAGGAAGCCACGCTCTTGTCCGACATCGTCGCCAGCGACGCCACTCTGGTCGAGCATGGCGGGCGCTGGTGGCTGTTC GCCACTGTCCGGGACGGCGGCGGCGCCTTTTCCGATGCGCTGCATCTGTGGTCGGCGCCCGACTTCCGCGGACCCTGGAC ACCGCATCCCAAAAACCCCGTGCTGGTCGACATCGCCTCTGCCCGGCCGGCCGGCCGCATGGTTGAGCGCAACGGCCAAT TGCTGCGTCCGGTGCAGGATTGCCGCAGGAGTTATGGCGCGGCCCTTGGCATCGCACGTGTCGCTCACCTTGATTTGAAC TGCATGGAGCAAGTCGTCGAGACCATCTTAACTCCTGGGGCGCTATGGAATGGGCGCAAGCTGCACACGCTCAACGAGGC GGGCGGCCTGGAATTCATCGATGGCTCGGCGATCGCGCCGCGCTGGAAACACTGGAAACAGAAGCGTTCGCCGTTAACGT AA
Upstream 100 bases:
>100_bases TTGGCACGGAGTTTGCCTAATAAAGGCACGTGCGTGTCGACACGGGGCCAGCGAGCAGGAGACGGATGGAAATGGGGCAG CAGATCAGTCCAGACCATCC
Downstream 100 bases:
>100_bases ACAATCGTTACTACCAGCCACCCGTGCTGGTTGCTTGAGGTTGATATGGGGCCGGAAGATATTTCCACTGCAGATTGTGC AGGCGCAAGATGACCAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MRPSLLPYFRTPARYRSRCWGCDMQVSLRLDSECVRAFHLLLLERLAALAQVEVSVDARPAGSGIPGSAAALFQLETAIH GLPADGLAKRLPLSALAPYRTQPPASPDLVIDLCGDVSLEGTRVWRVTYDGAAGEAALLALILDGRTPISRIEERAATVA EGRLGTEYGGIALASFQDMLARTASLILAAMPPSATNGAARAALPVLPEPAQAVAPPQIPSPAKLGIRAGKALARRIVQK IYHLCYNAPHWKVGWRETKGLDLFDLRAHPATGWQVLPDDGSRFYADPFPILYQGQVTLFVEDYIHRLGRAIISAVPFGP SGPIGRPEPVLDLPYHLSYPFVFERDGEVWMVPESCANRTVDLYRATAFPGGWVKEATLLSDIVASDATLVEHGGRWWLF ATVRDGGGAFSDALHLWSAPDFRGPWTPHPKNPVLVDIASARPAGRMVERNGQLLRPVQDCRRSYGAALGIARVAHLDLN CMEQVVETILTPGALWNGRKLHTLNEAGGLEFIDGSAIAPRWKHWKQKRSPLT
Sequences:
>Translated_533_residues MRPSLLPYFRTPARYRSRCWGCDMQVSLRLDSECVRAFHLLLLERLAALAQVEVSVDARPAGSGIPGSAAALFQLETAIH GLPADGLAKRLPLSALAPYRTQPPASPDLVIDLCGDVSLEGTRVWRVTYDGAAGEAALLALILDGRTPISRIEERAATVA EGRLGTEYGGIALASFQDMLARTASLILAAMPPSATNGAARAALPVLPEPAQAVAPPQIPSPAKLGIRAGKALARRIVQK IYHLCYNAPHWKVGWRETKGLDLFDLRAHPATGWQVLPDDGSRFYADPFPILYQGQVTLFVEDYIHRLGRAIISAVPFGP SGPIGRPEPVLDLPYHLSYPFVFERDGEVWMVPESCANRTVDLYRATAFPGGWVKEATLLSDIVASDATLVEHGGRWWLF ATVRDGGGAFSDALHLWSAPDFRGPWTPHPKNPVLVDIASARPAGRMVERNGQLLRPVQDCRRSYGAALGIARVAHLDLN CMEQVVETILTPGALWNGRKLHTLNEAGGLEFIDGSAIAPRWKHWKQKRSPLT >Mature_533_residues MRPSLLPYFRTPARYRSRCWGCDMQVSLRLDSECVRAFHLLLLERLAALAQVEVSVDARPAGSGIPGSAAALFQLETAIH GLPADGLAKRLPLSALAPYRTQPPASPDLVIDLCGDVSLEGTRVWRVTYDGAAGEAALLALILDGRTPISRIEERAATVA EGRLGTEYGGIALASFQDMLARTASLILAAMPPSATNGAARAALPVLPEPAQAVAPPQIPSPAKLGIRAGKALARRIVQK IYHLCYNAPHWKVGWRETKGLDLFDLRAHPATGWQVLPDDGSRFYADPFPILYQGQVTLFVEDYIHRLGRAIISAVPFGP SGPIGRPEPVLDLPYHLSYPFVFERDGEVWMVPESCANRTVDLYRATAFPGGWVKEATLLSDIVASDATLVEHGGRWWLF ATVRDGGGAFSDALHLWSAPDFRGPWTPHPKNPVLVDIASARPAGRMVERNGQLLRPVQDCRRSYGAALGIARVAHLDLN CMEQVVETILTPGALWNGRKLHTLNEAGGLEFIDGSAIAPRWKHWKQKRSPLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58065; Mature: 58065
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSLLPYFRTPARYRSRCWGCDMQVSLRLDSECVRAFHLLLLERLAALAQVEVSVDARP CCCCCCCHHCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHEEEEEECCCC AGSGIPGSAAALFQLETAIHGLPADGLAKRLPLSALAPYRTQPPASPDLVIDLCGDVSLE CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCCCCCCEEEEECCCCCCC GTRVWRVTYDGAAGEAALLALILDGRTPISRIEERAATVAEGRLGTEYGGIALASFQDML CEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH ARTASLILAAMPPSATNGAARAALPVLPEPAQAVAPPQIPSPAKLGIRAGKALARRIVQK HHHHHHEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IYHLCYNAPHWKVGWRETKGLDLFDLRAHPATGWQVLPDDGSRFYADPFPILYQGQVTLF HHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCEEECCCCCEEECCEEEEE VEDYIHRLGRAIISAVPFGPSGPIGRPEPVLDLPYHLSYPFVFERDGEVWMVPESCANRT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCEEEECCCCEEECCHHHCCCC VDLYRATAFPGGWVKEATLLSDIVASDATLVEHGGRWWLFATVRDGGGAFSDALHLWSAP EEEEEEECCCCCCHHHHHHHHHHHHCCCHHEECCCCEEEEEEEECCCCHHHHHHHHCCCC DFRGPWTPHPKNPVLVDIASARPAGRMVERNGQLLRPVQDCRRSYGAALGIARVAHLDLN CCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHH CMEQVVETILTPGALWNGRKLHTLNEAGGLEFIDGSAIAPRWKHWKQKRSPLT HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MRPSLLPYFRTPARYRSRCWGCDMQVSLRLDSECVRAFHLLLLERLAALAQVEVSVDARP CCCCCCCHHCCCHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHEEEEEECCCC AGSGIPGSAAALFQLETAIHGLPADGLAKRLPLSALAPYRTQPPASPDLVIDLCGDVSLE CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHCCCCCCCCCCCCCEEEEECCCCCCC GTRVWRVTYDGAAGEAALLALILDGRTPISRIEERAATVAEGRLGTEYGGIALASFQDML CEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHH ARTASLILAAMPPSATNGAARAALPVLPEPAQAVAPPQIPSPAKLGIRAGKALARRIVQK HHHHHHEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH IYHLCYNAPHWKVGWRETKGLDLFDLRAHPATGWQVLPDDGSRFYADPFPILYQGQVTLF HHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCEEECCCCCEEECCEEEEE VEDYIHRLGRAIISAVPFGPSGPIGRPEPVLDLPYHLSYPFVFERDGEVWMVPESCANRT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCEEEECCCCEEECCHHHCCCC VDLYRATAFPGGWVKEATLLSDIVASDATLVEHGGRWWLFATVRDGGGAFSDALHLWSAP EEEEEEECCCCCCHHHHHHHHHHHHCCCHHEECCCCEEEEEEEECCCCHHHHHHHHCCCC DFRGPWTPHPKNPVLVDIASARPAGRMVERNGQLLRPVQDCRRSYGAALGIARVAHLDLN CCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCHH CMEQVVETILTPGALWNGRKLHTLNEAGGLEFIDGSAIAPRWKHWKQKRSPLT HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA