| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471956
Identifier: 13471956
GI number: 13471956
Start: 1714250
End: 1715470
Strand: Direct
Name: 13471956
Synonym: mlr2092
Alternate gene names: NA
Gene position: 1714250-1715470 (Clockwise)
Preceding gene: 13471955
Following gene: 13471958
Centisome position: 24.36
GC content: 63.72
Gene sequence:
>1221_bases GTGCAGGCGCAAGATGACCAGCAGAAAGGCAAAGACATGACCACCGCCGCGGCTGGCCCGACCGAAGTCGACGTAGCGAT CATCGGCGCCGGAATGGCCGGCACCACCCTGGCAACGCTGTTGGGAAACGCCGGCCGCAAGGTGGCGCTGATCGATCCGC ACCGCGTTCATCACGACGAGTTCCGGGCCGAGAAGATCGGTGCGGATCAGATGCAGCTGTTCGAGAAGCTCGGCCTCGAC AAGATGGTCATGCCGCTCGTCACCCCGTTTACCGACATAGATGTCTTCCGCCTCGGCCAATTCTTCGCCCGTGAAAAGAA GTGGGAGTACGCATTTTCCTATGGGGCGCTGATCAATGGCCTGCGCGACGCATTGCCGCCGCAAGTGCCGATCACGATCG GCAAGGTGGCCGAAGTGTCGACCGGACCTAACCGGCAGCGGCTTGTGCTGGCCGACGGCGCCGTCATCGATGCCCGCCTG CTGGTGGTGGCCACCGGCTACAGCGAATTGGTGCGGCGCGCCATCGGCGTCGAGCGCATCGAACTGTCGAAGGCGCATTC GCTGTCCATGGGATTCGACCTCGCCATTGCGCCGCGTGACTGCGCCTATCGGGCGGTCACCTGCTACGGCAAGCGGGCCT CGGACCGTGTCGCCTATCTCACCGTCTTTCCCATCGGCGACAAGATGCGCGCGAACATGTTCGTCTATCGCACCGTCGCC GAACAATGGACGCGGGACTTCCGCGCCGATCCGCAGAAAATGCTTTGCGAGCTCATGCCCGAAATCGCGACGCAGTGTGG TAACTTCGAGGTGGCGAGCCCTGTCGAGGTCAGGCAGGTCAATCTGACCACGACGCAGGGCCATCGCCGCGACGGCGTCG TCTTCATCGGCGACGCATTCGTGACGACATGCCCGACGCCGGGCGTCGGCATCGGGCGGGTCATGGTCGATGTCGATCAG CTCCATTCCGTTCACATTCCGCGCTGGCTGGAAACACCAGGCATGGCGGCTGACAAGATCGGCGCTTTCTATGACGACCC GGTCAAGGTGGCCGCCGACAAGGCAGGCATGCGAGTGAGCTTCTACGCCAAGCAGATCACCACCGAAACCGGACTGGAAT GGCGCGTGCGGCGCCTGCGCAACAACGCGGCGCGTCAACTGATGATCATCGGCCGCAAGATGCGCCATTTGGGACCGCGG CGGGAGCCCGGCATGGCGTGA
Upstream 100 bases:
>100_bases CAGAAGCGTTCGCCGTTAACGTAAACAATCGTTACTACCAGCCACCCGTGCTGGTTGCTTGAGGTTGATATGGGGCCGGA AGATATTTCCACTGCAGATT
Downstream 100 bases:
>100_bases GGGTCCTCCACCCTCTCCCCCATTGAAGGCAGAGGCGTGTTCCCTTCTTCTCCCTTCAGGGAGAAGGGAAGCGCGCCAGC CTTGTGATTGCGGTGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MQAQDDQQKGKDMTTAAAGPTEVDVAIIGAGMAGTTLATLLGNAGRKVALIDPHRVHHDEFRAEKIGADQMQLFEKLGLD KMVMPLVTPFTDIDVFRLGQFFAREKKWEYAFSYGALINGLRDALPPQVPITIGKVAEVSTGPNRQRLVLADGAVIDARL LVVATGYSELVRRAIGVERIELSKAHSLSMGFDLAIAPRDCAYRAVTCYGKRASDRVAYLTVFPIGDKMRANMFVYRTVA EQWTRDFRADPQKMLCELMPEIATQCGNFEVASPVEVRQVNLTTTQGHRRDGVVFIGDAFVTTCPTPGVGIGRVMVDVDQ LHSVHIPRWLETPGMAADKIGAFYDDPVKVAADKAGMRVSFYAKQITTETGLEWRVRRLRNNAARQLMIIGRKMRHLGPR REPGMA
Sequences:
>Translated_406_residues MQAQDDQQKGKDMTTAAAGPTEVDVAIIGAGMAGTTLATLLGNAGRKVALIDPHRVHHDEFRAEKIGADQMQLFEKLGLD KMVMPLVTPFTDIDVFRLGQFFAREKKWEYAFSYGALINGLRDALPPQVPITIGKVAEVSTGPNRQRLVLADGAVIDARL LVVATGYSELVRRAIGVERIELSKAHSLSMGFDLAIAPRDCAYRAVTCYGKRASDRVAYLTVFPIGDKMRANMFVYRTVA EQWTRDFRADPQKMLCELMPEIATQCGNFEVASPVEVRQVNLTTTQGHRRDGVVFIGDAFVTTCPTPGVGIGRVMVDVDQ LHSVHIPRWLETPGMAADKIGAFYDDPVKVAADKAGMRVSFYAKQITTETGLEWRVRRLRNNAARQLMIIGRKMRHLGPR REPGMA >Mature_406_residues MQAQDDQQKGKDMTTAAAGPTEVDVAIIGAGMAGTTLATLLGNAGRKVALIDPHRVHHDEFRAEKIGADQMQLFEKLGLD KMVMPLVTPFTDIDVFRLGQFFAREKKWEYAFSYGALINGLRDALPPQVPITIGKVAEVSTGPNRQRLVLADGAVIDARL LVVATGYSELVRRAIGVERIELSKAHSLSMGFDLAIAPRDCAYRAVTCYGKRASDRVAYLTVFPIGDKMRANMFVYRTVA EQWTRDFRADPQKMLCELMPEIATQCGNFEVASPVEVRQVNLTTTQGHRRDGVVFIGDAFVTTCPTPGVGIGRVMVDVDQ LHSVHIPRWLETPGMAADKIGAFYDDPVKVAADKAGMRVSFYAKQITTETGLEWRVRRLRNNAARQLMIIGRKMRHLGPR REPGMA
Specific function: Unknown
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44875; Mature: 44875
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQDDQQKGKDMTTAAAGPTEVDVAIIGAGMAGTTLATLLGNAGRKVALIDPHRVHHDE CCCCCCHHHCCCCEECCCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHCHHH FRAEKIGADQMQLFEKLGLDKMVMPLVTPFTDIDVFRLGQFFAREKKWEYAFSYGALING HHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LRDALPPQVPITIGKVAEVSTGPNRQRLVLADGAVIDARLLVVATGYSELVRRAIGVERI HHHHCCCCCCEEECCEEECCCCCCCCEEEEECCCEEEEEEEEEECCHHHHHHHHHCCHHE ELSKAHSLSMGFDLAIAPRDCAYRAVTCYGKRASDRVAYLTVFPIGDKMRANMFVYRTVA EHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHCCCHHHHHHH EQWTRDFRADPQKMLCELMPEIATQCGNFEVASPVEVRQVNLTTTQGHRRDGVVFIGDAF HHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCCCCCCEEEECCCE VTTCPTPGVGIGRVMVDVDQLHSVHIPRWLETPGMAADKIGAFYDDPVKVAADKAGMRVS EEECCCCCCCCCHHEEEHHHHHHCCCCHHHCCCCCCHHHCCCCCCCCHHEECCCCCCEEE FYAKQITTETGLEWRVRRLRNNAARQLMIIGRKMRHLGPRREPGMA EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQAQDDQQKGKDMTTAAAGPTEVDVAIIGAGMAGTTLATLLGNAGRKVALIDPHRVHHDE CCCCCCHHHCCCCEECCCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEECCHHHCHHH FRAEKIGADQMQLFEKLGLDKMVMPLVTPFTDIDVFRLGQFFAREKKWEYAFSYGALING HHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LRDALPPQVPITIGKVAEVSTGPNRQRLVLADGAVIDARLLVVATGYSELVRRAIGVERI HHHHCCCCCCEEECCEEECCCCCCCCEEEEECCCEEEEEEEEEECCHHHHHHHHHCCHHE ELSKAHSLSMGFDLAIAPRDCAYRAVTCYGKRASDRVAYLTVFPIGDKMRANMFVYRTVA EHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEEEEECCCCHHCCCHHHHHHH EQWTRDFRADPQKMLCELMPEIATQCGNFEVASPVEVRQVNLTTTQGHRRDGVVFIGDAF HHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCCCCCCEEEECCCE VTTCPTPGVGIGRVMVDVDQLHSVHIPRWLETPGMAADKIGAFYDDPVKVAADKAGMRVS EEECCCCCCCCCHHEEEHHHHHHCCCCHHHCCCCCCHHHCCCCCCCCHHEECCCCCCEEE FYAKQITTETGLEWRVRRLRNNAARQLMIIGRKMRHLGPRREPGMA EEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA