Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471702

Identifier: 13471702

GI number: 13471702

Start: 1464776

End: 1465555

Strand: Direct

Name: 13471702

Synonym: mlr1753

Alternate gene names: NA

Gene position: 1464776-1465555 (Clockwise)

Preceding gene: 13471698

Following gene: 13471709

Centisome position: 20.82

GC content: 60.64

Gene sequence:

>780_bases
ATGACGCGTTGGAAAGGTGTGGGCGTGGCGGCGATAGCCGCATTGTCGTTCGTTGCGCTGAAGGTGTTGCCCTGGGCGCT
CGGCTTTGCCGGCGGCAAATATCTCTATCAGACTGTGGCGGGCTCGCCCGATCCGCAAATGCTGACCACGGCTCAGGTGA
GCGAACAGATTGAGAGCCAGGGGAGCCAGATATTCAAAGCAATCAAGCAGGAATTCCCAGAAGACTACGACGCCGTCGTG
GAAAAGATCACGGCCGTGGCCAGACTGGGAAATGTCGACCAGGTGCGAAACACCAGCAGGGTGGCGGTGGCCGATCTCAG
GCAACGATACGCATCCCTTCTGTCCTCGGCTCCGGACAGCAAGGCTGCGGAAGCCCTGCGCGCGCAATTGGACATGCTCA
ACCATGTCATGGCGCGGGAAACAGCTGCCACCTGTGACAACTACCTTCGCCAGGGGCCGGGCGCGCTCAGCACGCCGGAC
CAGGATTTTCTGGGTGACATGGACAAGATAGGCGCCACCCTGTTCCACGCTTTCGGCGCGGCGAAAAAGGGCGGTCTGCC
GGCCGCTTCGGCCAGCGACGAAGACTGGTCGCTGCTGGCCGACGCTTTCATCAAGGCTGGCGGCACTCCCGTCGAGATGA
ATGCCATTGCCAATGTCAGCCTGGAATTCGAAGGTCTCTGCCCGGCCGTCGCGAAACTTTATACGTCTGCTCTGTCGCTG
CAGGGTGAGCCCGGGCGGCATATCAAAACCACTTTGCTCTATGAGATCGCCCGGAACTAG

Upstream 100 bases:

>100_bases
GCGATAGGATTGCGCGTAGAACGCGCGAAGCGCCGAGGCCGACCGCGAGAAGGCGCTGAGCCTCGGGCGAAATAGAGACA
AGGTTCGGGAGGGCTGGCGG

Downstream 100 bases:

>100_bases
TCGGGTCTGCGGATCCGCGCGGTGATCAGGATCTGTCATGCCTGGCGAGCCTCTTTGGCTCGCCAGGCATACCCGGCTTC
GAGAGGCCGACTGGCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQGSQIFKAIKQEFPEDYDAVV
EKITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDSKAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPD
QDFLGDMDKIGATLFHAFGAAKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSL
QGEPGRHIKTTLLYEIARN

Sequences:

>Translated_259_residues
MTRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQGSQIFKAIKQEFPEDYDAVV
EKITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDSKAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPD
QDFLGDMDKIGATLFHAFGAAKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSL
QGEPGRHIKTTLLYEIARN
>Mature_258_residues
TRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQGSQIFKAIKQEFPEDYDAVVE
KITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDSKAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPDQ
DFLGDMDKIGATLFHAFGAAKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSLQ
GEPGRHIKTTLLYEIARN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27594; Mature: 27462

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GSQIFKAIKQEFPEDYDAVVEKITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
KAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPDQDFLGDMDKIGATLFHAFGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH
AKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSL
HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHCCCEEECCCCHHHHHHHHHHHHC
QGEPGRHIKTTLLYEIARN
CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRWKGVGVAAIAALSFVALKVLPWALGFAGGKYLYQTVAGSPDPQMLTTAQVSEQIESQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
GSQIFKAIKQEFPEDYDAVVEKITAVARLGNVDQVRNTSRVAVADLRQRYASLLSSAPDS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
KAAEALRAQLDMLNHVMARETAATCDNYLRQGPGALSTPDQDFLGDMDKIGATLFHAFGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHHH
AKKGGLPAASASDEDWSLLADAFIKAGGTPVEMNAIANVSLEFEGLCPAVAKLYTSALSL
HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHCCCEEECCCCHHHHHHHHHHHHC
QGEPGRHIKTTLLYEIARN
CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA