Click here to switch to the map view.

The map label for this gene is amaB [H]

Identifier: 13471608

GI number: 13471608

Start: 1354899

End: 1356149

Strand: Reverse

Name: amaB [H]

Synonym: mll1631

Alternate gene names: 13471608

Gene position: 1356149-1354899 (Counterclockwise)

Preceding gene: 13471609

Following gene: 13471607

Centisome position: 19.27

GC content: 64.35

Gene sequence:

>1251_bases
ATGGCCGCACCCGGCGAGAATCTGCGAATCAATTCAGACCGTTTGTGGGATTCGATAATGGAAATGGCGAAGATCGGCCC
CGGCATTGCCGGCGGCAACAATCGCCAGACCGTGACCGACGAGGACGGCGAGGGCCGGCATCTGTTCAAGCGCTGGTGCG
ATGCCGCCGGGCTCGAAATGGGCGTCGACGAGATGGGCACGATGTTTGCCCGCCGTGAAGGTACCGACCCCAGCCTGCCG
CCGGTCTATGTCGGCAGCCATCTCGACACCCAGCCGACCGGCGGCAAATATGATGGCGTGCTTGGCGTTCTCGGCGGGCT
GGAGATCGTGCGCTCGCTCAACGATCTCGGCATCAAGACGAAACATCCGATCGTCGTCACCAACTGGACCAACGAGGAAG
GCGCGCGCTTCGCGCCGGCGATGATGGCGTCGGGGGTGTTCGCCGGCGTGCTCGACCAGGCCGACGTCTACGAGCACACG
GACAAGAACGGCAAGAAATTCGGCGAGGAGCTGGAGCACATCGGCTGGAAGGGCACCGAGAAGGTCGGCGCGCGCCAAAT
CCACGCCTTCTTCGAACTGCATATCGAGCAGGGTCCAATCCTCGAGGACGAGGACATCGACATCGGCGTCGTCACCCATG
GCCAGGGCCTGAAATGGCTGCAGGTGACGCTGACCGGCAAGGAAGCCCATACCGGCTCGACGCCGATGCCCAAGCGCCGC
AATGCCGGGCTCGGCATGGCCCGCGTGATAGAACTGGTGCACGAGATCGCTATGGACTACCAGCCGGATGCCGTCGGCGC
GGTCGGGCACATGGAAGCCTATCCCAATTCGCGCAACATCATCGCCGGCCGCACCGTCTTCACCATCGACATCCGCTCGC
CCGAGAAGGAAGTGCTCGACGCCATGGATGCGCGCGTCCGCGAAGGCATCGACACGATCTGCGAGGCGCTCGACATCCAG
TACAAGGTCGAGCAGGTCGGCCATTTCGATCCGGTCACCTTCGATGCCGGCTGCGTGAAGGCGATCCGCGATGCCGCGGA
CCGCCTCGGCTATACGCACCGCAACATCGTCTCGGGTGCGGGCCACGACGCCTGCTGGATCAACCGCGTCGCGCCGACCG
CCATGGTGATGTGCCCGTGCGTCGACGGGTTGTCGCACAACGAGGCCGAGGAGATCACCAAGGAATGGGCTTCGGCCGGC
GCCGACGTGCTGTTCCACGCGGTTGTGGAGACCGCCGTCATCGTAGAGTGA

Upstream 100 bases:

>100_bases
CATGTGCGTGAAGTGCTGCGGTCGATCGACTAGCCTGGTCTATAAATCGGGCGGCGTTGGGAACCGCCGTCCGATTTTGA
ATGAAATGGAAGGATTTTGA

Downstream 100 bases:

>100_bases
ACTTAGCCATCTAGATTCCAAACGCCGCTCGCAAAGAAGCGCGAAGAGAACAAGGGAACAAGACAATGACCAAAGTCATC
AAGAACGGCACCATCGTCAC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MAAPGENLRINSDRLWDSIMEMAKIGPGIAGGNNRQTVTDEDGEGRHLFKRWCDAAGLEMGVDEMGTMFARREGTDPSLP
PVYVGSHLDTQPTGGKYDGVLGVLGGLEIVRSLNDLGIKTKHPIVVTNWTNEEGARFAPAMMASGVFAGVLDQADVYEHT
DKNGKKFGEELEHIGWKGTEKVGARQIHAFFELHIEQGPILEDEDIDIGVVTHGQGLKWLQVTLTGKEAHTGSTPMPKRR
NAGLGMARVIELVHEIAMDYQPDAVGAVGHMEAYPNSRNIIAGRTVFTIDIRSPEKEVLDAMDARVREGIDTICEALDIQ
YKVEQVGHFDPVTFDAGCVKAIRDAADRLGYTHRNIVSGAGHDACWINRVAPTAMVMCPCVDGLSHNEAEEITKEWASAG
ADVLFHAVVETAVIVE

Sequences:

>Translated_416_residues
MAAPGENLRINSDRLWDSIMEMAKIGPGIAGGNNRQTVTDEDGEGRHLFKRWCDAAGLEMGVDEMGTMFARREGTDPSLP
PVYVGSHLDTQPTGGKYDGVLGVLGGLEIVRSLNDLGIKTKHPIVVTNWTNEEGARFAPAMMASGVFAGVLDQADVYEHT
DKNGKKFGEELEHIGWKGTEKVGARQIHAFFELHIEQGPILEDEDIDIGVVTHGQGLKWLQVTLTGKEAHTGSTPMPKRR
NAGLGMARVIELVHEIAMDYQPDAVGAVGHMEAYPNSRNIIAGRTVFTIDIRSPEKEVLDAMDARVREGIDTICEALDIQ
YKVEQVGHFDPVTFDAGCVKAIRDAADRLGYTHRNIVSGAGHDACWINRVAPTAMVMCPCVDGLSHNEAEEITKEWASAG
ADVLFHAVVETAVIVE
>Mature_415_residues
AAPGENLRINSDRLWDSIMEMAKIGPGIAGGNNRQTVTDEDGEGRHLFKRWCDAAGLEMGVDEMGTMFARREGTDPSLPP
VYVGSHLDTQPTGGKYDGVLGVLGGLEIVRSLNDLGIKTKHPIVVTNWTNEEGARFAPAMMASGVFAGVLDQADVYEHTD
KNGKKFGEELEHIGWKGTEKVGARQIHAFFELHIEQGPILEDEDIDIGVVTHGQGLKWLQVTLTGKEAHTGSTPMPKRRN
AGLGMARVIELVHEIAMDYQPDAVGAVGHMEAYPNSRNIIAGRTVFTIDIRSPEKEVLDAMDARVREGIDTICEALDIQY
KVEQVGHFDPVTFDAGCVKAIRDAADRLGYTHRNIVSGAGHDACWINRVAPTAMVMCPCVDGLSHNEAEEITKEWASAGA
DVLFHAVVETAVIVE

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=371, Percent_Identity=32.3450134770889, Blast_Score=181, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45244; Mature: 45112

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPGENLRINSDRLWDSIMEMAKIGPGIAGGNNRQTVTDEDGEGRHLFKRWCDAAGLEM
CCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
GVDEMGTMFARREGTDPSLPPVYVGSHLDTQPTGGKYDGVLGVLGGLEIVRSLNDLGIKT
CHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
KHPIVVTNWTNEEGARFAPAMMASGVFAGVLDQADVYEHTDKNGKKFGEELEHIGWKGTE
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
KVGARQIHAFFELHIEQGPILEDEDIDIGVVTHGQGLKWLQVTLTGKEAHTGSTPMPKRR
HHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC
NAGLGMARVIELVHEIAMDYQPDAVGAVGHMEAYPNSRNIIAGRTVFTIDIRSPEKEVLD
CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEECCEEEEEECCCCHHHHHH
AMDARVREGIDTICEALDIQYKVEQVGHFDPVTFDAGCVKAIRDAADRLGYTHRNIVSGA
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC
GHDACWINRVAPTAMVMCPCVDGLSHNEAEEITKEWASAGADVLFHAVVETAVIVE
CCCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAPGENLRINSDRLWDSIMEMAKIGPGIAGGNNRQTVTDEDGEGRHLFKRWCDAAGLEM
CCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
GVDEMGTMFARREGTDPSLPPVYVGSHLDTQPTGGKYDGVLGVLGGLEIVRSLNDLGIKT
CHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
KHPIVVTNWTNEEGARFAPAMMASGVFAGVLDQADVYEHTDKNGKKFGEELEHIGWKGTE
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
KVGARQIHAFFELHIEQGPILEDEDIDIGVVTHGQGLKWLQVTLTGKEAHTGSTPMPKRR
HHHHHHHHHHHHEEECCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC
NAGLGMARVIELVHEIAMDYQPDAVGAVGHMEAYPNSRNIIAGRTVFTIDIRSPEKEVLD
CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEECCEEEEEECCCCHHHHHH
AMDARVREGIDTICEALDIQYKVEQVGHFDPVTFDAGCVKAIRDAADRLGYTHRNIVSGA
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCC
GHDACWINRVAPTAMVMCPCVDGLSHNEAEEITKEWASAGADVLFHAVVETAVIVE
CCCCHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]