| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yuaD [H]
Identifier: 13471582
GI number: 13471582
Start: 1330797
End: 1331435
Strand: Reverse
Name: yuaD [H]
Synonym: mll1596
Alternate gene names: 13471582
Gene position: 1331435-1330797 (Counterclockwise)
Preceding gene: 13471583
Following gene: 13471579
Centisome position: 18.92
GC content: 63.38
Gene sequence:
>639_bases ATGATTCAAGGACCGAACGCCATGCTGGATCTTTTCCCCGAAGCCGAGAAGCCGGTCGAAATCATTCCGGCGAAGAAGCT TTCCGCTCGCGCCGCAGCGCTCTATGTCGCGCCGGCGGAGCATTTCCAGACAAGACCGGTGGAGGAATTGCGGCTTGGCT TCGATGGCATTTTGGGCGATTTCCATGCCGGATCGACGCGGCGCTCGGGCGGGCGCGAACCCTGGTATCCGCGCGGCACC GAAATGCGCAACGAGCGGCAGCTGTCGATCGTGGCTGCGGACGAACTTGCCATCGTCGCCGAGCGGATGGGCCTTCCCGA CATCAAGCCGGAATGGATCGGCGCCAATCTGGTGATCGAGGGCGTGCCGCATCTGTCGATGCTGCCGGCCGGCACGTTGC TGTTCTTCAAGGATGGCGTGACCCTCAAGGTCGACGCCCAGAACGGACCATGCCGCATCGCCGGGCGATCGATCGCTGAA AATGCCGGAATGGCCGACATCGAAGCCGGCGCGCTGCTCTTTCCCAAAGTGGCCAAGCGGCTGCGTGGCGTGGTCGCCTG GGTCGAGAAGCCCGGAACGATCAGGGCGGGCGAAGAAATCTCGGCGCGGGTGCCGGAGCAGTGGATTTACCAGACATAG
Upstream 100 bases:
>100_bases TGTCGATCCAGGCGCGGGACGGCGCCTCGGCCGAAGAGTTGCGCATTATGGCCCAAACCGCTCTTGCGGCCTTGCCGCCC GAAGGGCAAAAACGGGGAGC
Downstream 100 bases:
>100_bases CTGCGCGGTTGAATCGTGGCCGAAGGGCTACGCCGCCCCTTGAGCGGCGTAGCAGAAGCTTGCCTCAGCCCTTGCGGTTC TTGTTCGCGCCTTGTGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGDFHAGSTRRSGGREPWYPRGT EMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIEGVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAE NAGMADIEAGALLFPKVAKRLRGVVAWVEKPGTIRAGEEISARVPEQWIYQT
Sequences:
>Translated_212_residues MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGDFHAGSTRRSGGREPWYPRGT EMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIEGVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAE NAGMADIEAGALLFPKVAKRLRGVVAWVEKPGTIRAGEEISARVPEQWIYQT >Mature_212_residues MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGDFHAGSTRRSGGREPWYPRGT EMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIEGVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAE NAGMADIEAGALLFPKVAKRLRGVVAWVEKPGTIRAGEEISARVPEQWIYQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MOSC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005302 - InterPro: IPR015808 - InterPro: IPR011037 [H]
Pfam domain/function: PF03473 MOSC [H]
EC number: NA
Molecular weight: Translated: 23117; Mature: 23117
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGD CCCCCCCCEECCCCCCCCEEEECCCCCCCCEEEEEEECHHHHCCCCHHHHHHCHHHHHCC FHAGSTRRSGGREPWYPRGTEMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIE CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCEEEEE GVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAENAGMADIEAGALLFPKVAKR CCCCCEECCCCEEEEEECCEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHH LRGVVAWVEKPGTIRAGEEISARVPEQWIYQT HHHHHHHHCCCCCEECCCHHHHCCCHHHCCCC >Mature Secondary Structure MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGD CCCCCCCCEECCCCCCCCEEEECCCCCCCCEEEEEEECHHHHCCCCHHHHHHCHHHHHCC FHAGSTRRSGGREPWYPRGTEMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIE CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCEEEEE GVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAENAGMADIEAGALLFPKVAKR CCCCCEECCCCEEEEEECCEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHH LRGVVAWVEKPGTIRAGEEISARVPEQWIYQT HHHHHHHHCCCCCEECCCHHHHCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]