Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yuaD [H]

Identifier: 13471582

GI number: 13471582

Start: 1330797

End: 1331435

Strand: Reverse

Name: yuaD [H]

Synonym: mll1596

Alternate gene names: 13471582

Gene position: 1331435-1330797 (Counterclockwise)

Preceding gene: 13471583

Following gene: 13471579

Centisome position: 18.92

GC content: 63.38

Gene sequence:

>639_bases
ATGATTCAAGGACCGAACGCCATGCTGGATCTTTTCCCCGAAGCCGAGAAGCCGGTCGAAATCATTCCGGCGAAGAAGCT
TTCCGCTCGCGCCGCAGCGCTCTATGTCGCGCCGGCGGAGCATTTCCAGACAAGACCGGTGGAGGAATTGCGGCTTGGCT
TCGATGGCATTTTGGGCGATTTCCATGCCGGATCGACGCGGCGCTCGGGCGGGCGCGAACCCTGGTATCCGCGCGGCACC
GAAATGCGCAACGAGCGGCAGCTGTCGATCGTGGCTGCGGACGAACTTGCCATCGTCGCCGAGCGGATGGGCCTTCCCGA
CATCAAGCCGGAATGGATCGGCGCCAATCTGGTGATCGAGGGCGTGCCGCATCTGTCGATGCTGCCGGCCGGCACGTTGC
TGTTCTTCAAGGATGGCGTGACCCTCAAGGTCGACGCCCAGAACGGACCATGCCGCATCGCCGGGCGATCGATCGCTGAA
AATGCCGGAATGGCCGACATCGAAGCCGGCGCGCTGCTCTTTCCCAAAGTGGCCAAGCGGCTGCGTGGCGTGGTCGCCTG
GGTCGAGAAGCCCGGAACGATCAGGGCGGGCGAAGAAATCTCGGCGCGGGTGCCGGAGCAGTGGATTTACCAGACATAG

Upstream 100 bases:

>100_bases
TGTCGATCCAGGCGCGGGACGGCGCCTCGGCCGAAGAGTTGCGCATTATGGCCCAAACCGCTCTTGCGGCCTTGCCGCCC
GAAGGGCAAAAACGGGGAGC

Downstream 100 bases:

>100_bases
CTGCGCGGTTGAATCGTGGCCGAAGGGCTACGCCGCCCCTTGAGCGGCGTAGCAGAAGCTTGCCTCAGCCCTTGCGGTTC
TTGTTCGCGCCTTGTGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGDFHAGSTRRSGGREPWYPRGT
EMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIEGVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAE
NAGMADIEAGALLFPKVAKRLRGVVAWVEKPGTIRAGEEISARVPEQWIYQT

Sequences:

>Translated_212_residues
MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGDFHAGSTRRSGGREPWYPRGT
EMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIEGVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAE
NAGMADIEAGALLFPKVAKRLRGVVAWVEKPGTIRAGEEISARVPEQWIYQT
>Mature_212_residues
MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGDFHAGSTRRSGGREPWYPRGT
EMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIEGVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAE
NAGMADIEAGALLFPKVAKRLRGVVAWVEKPGTIRAGEEISARVPEQWIYQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 23117; Mature: 23117

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGD
CCCCCCCCEECCCCCCCCEEEECCCCCCCCEEEEEEECHHHHCCCCHHHHHHCHHHHHCC
FHAGSTRRSGGREPWYPRGTEMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIE
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCEEEEE
GVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAENAGMADIEAGALLFPKVAKR
CCCCCEECCCCEEEEEECCEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHH
LRGVVAWVEKPGTIRAGEEISARVPEQWIYQT
HHHHHHHHCCCCCEECCCHHHHCCCHHHCCCC
>Mature Secondary Structure
MIQGPNAMLDLFPEAEKPVEIIPAKKLSARAAALYVAPAEHFQTRPVEELRLGFDGILGD
CCCCCCCCEECCCCCCCCEEEECCCCCCCCEEEEEEECHHHHCCCCHHHHHHCHHHHHCC
FHAGSTRRSGGREPWYPRGTEMRNERQLSIVAADELAIVAERMGLPDIKPEWIGANLVIE
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCEEEEE
GVPHLSMLPAGTLLFFKDGVTLKVDAQNGPCRIAGRSIAENAGMADIEAGALLFPKVAKR
CCCCCEECCCCEEEEEECCEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCHHHHHHHH
LRGVVAWVEKPGTIRAGEEISARVPEQWIYQT
HHHHHHHHCCCCCEECCCHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]