| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471579
Identifier: 13471579
GI number: 13471579
Start: 1328134
End: 1328640
Strand: Reverse
Name: 13471579
Synonym: mll1593
Alternate gene names: NA
Gene position: 1328640-1328134 (Counterclockwise)
Preceding gene: 13471582
Following gene: 13471576
Centisome position: 18.88
GC content: 63.12
Gene sequence:
>507_bases ATGGGCAGGCTTGGGACGGTCATCGCGACCATGATGATTTTCGCCGCGGGCGAGGCCAGCGCGCAGTGCGTGAAACAAGG CGACGAACTCTGCCAAAACGGCCAGACCTATCGCTGCGAGAAGACCGGCACCGAACTGACACCGATCTTCCAGAACCTGC CTTGCACGGCGAATGCGCCGGCGCAGACGCTGACCGGCAAGTGGATCGGCAGTGGCCACCAGAGCCCGGCGGGTGACGCC GGCGCCGACTGGTCGATCGCCATGACAATCAGCGATGACGGCGCGTCGATCGATTATCCGTCACTCGGCTGCGGCGGATC GCTGTCGCAGACGTCGAGGGACGAGACGTCGGCGGAATTCCATGAGAGCATCACCTACGGCCAGGACAAGTGCATCGATG GCGGCGATATCACCGTCCGGTTTTTCAAGGGAAACCTGTCCTGGACCTGGGTCGGCCAGGCCGATGGCCAGCCCTACAAT GCGATCGCCGTGCTGACCAAGCAATAG
Upstream 100 bases:
>100_bases AGGGCCAGCCGTCTGGCGCTGTTCGTCCTCCATGACGGTCCAGCCGATACACCGGATTGGAATTGCCTTATAGTTCGATA GCTCGGGACGGGAGGGGGAT
Downstream 100 bases:
>100_bases CGGCCTCATTCCTCCTCGTCGTCGGCATCGAGCAGGCGGGTCGCGCGCCAGCGGGTGAGCATGATGTTGGTCTGCTCGAT GACAAAGAAGCGAGCGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MGRLGTVIATMMIFAAGEASAQCVKQGDELCQNGQTYRCEKTGTELTPIFQNLPCTANAPAQTLTGKWIGSGHQSPAGDA GADWSIAMTISDDGASIDYPSLGCGGSLSQTSRDETSAEFHESITYGQDKCIDGGDITVRFFKGNLSWTWVGQADGQPYN AIAVLTKQ
Sequences:
>Translated_168_residues MGRLGTVIATMMIFAAGEASAQCVKQGDELCQNGQTYRCEKTGTELTPIFQNLPCTANAPAQTLTGKWIGSGHQSPAGDA GADWSIAMTISDDGASIDYPSLGCGGSLSQTSRDETSAEFHESITYGQDKCIDGGDITVRFFKGNLSWTWVGQADGQPYN AIAVLTKQ >Mature_167_residues GRLGTVIATMMIFAAGEASAQCVKQGDELCQNGQTYRCEKTGTELTPIFQNLPCTANAPAQTLTGKWIGSGHQSPAGDAG ADWSIAMTISDDGASIDYPSLGCGGSLSQTSRDETSAEFHESITYGQDKCIDGGDITVRFFKGNLSWTWVGQADGQPYNA IAVLTKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17739; Mature: 17608
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLGTVIATMMIFAAGEASAQCVKQGDELCQNGQTYRCEKTGTELTPIFQNLPCTANAP CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCC AQTLTGKWIGSGHQSPAGDAGADWSIAMTISDDGASIDYPSLGCGGSLSQTSRDETSAEF CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH HESITYGQDKCIDGGDITVRFFKGNLSWTWVGQADGQPYNAIAVLTKQ HHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEECC >Mature Secondary Structure GRLGTVIATMMIFAAGEASAQCVKQGDELCQNGQTYRCEKTGTELTPIFQNLPCTANAP CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCC AQTLTGKWIGSGHQSPAGDAGADWSIAMTISDDGASIDYPSLGCGGSLSQTSRDETSAEF CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH HESITYGQDKCIDGGDITVRFFKGNLSWTWVGQADGQPYNAIAVLTKQ HHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA