Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471431

Identifier: 13471431

GI number: 13471431

Start: 1171143

End: 1171859

Strand: Reverse

Name: 13471431

Synonym: mll1399

Alternate gene names: NA

Gene position: 1171859-1171143 (Counterclockwise)

Preceding gene: 13471433

Following gene: 13471426

Centisome position: 16.66

GC content: 63.88

Gene sequence:

>717_bases
ATGAGTTTCGACCTGCCACGCAATGTCATCCTGCCGGTCGATGCAATCGACGTCCGGCTTGATTCCGGCCCACATCCTTT
CGCCAGGGAAAATGCGGAGGCGATCGCCGAGAACTGGCAGCGCGAGATAGCGGTCAAGCCGGCGCTGTTCGACGGCACGG
TGGTGCTGCTGTCGCAACTCGCGTACCGCGACAACCGTCTGGTCGGGCGCTGCCATGCGGTCAACTACTCCACCTTCATG
CTTTGGCGGAAGCGGCGCGAGAATTCAGGCGCCGAGCACGCCTATGCCCATGCCATGCTGGTGGCCGGCGACAGTGCGCT
GGTGGCGATCCGCATGGGCTCACACACGGTCAATGCCGGGCGCGTCTATTTCGCCGCCGGTTCGTTCGAGCCGGACGACT
TTCGCGACGGTCAGGTCGATGTCGACTTCAACATGATCCGCGAGGTTCGCGAGGAGACAGGCCTCGACCTCTCGGCCGCC
AGGCGCGGCGTGCGCTGGCACGCCCTGTCAACCACGCGTGGGACCGTCATCTTCCGTCGCTATCATGTCGACGAGCCAGC
CGATGAGATCGCGCGGCGAATCTCAGCCTTCGTCGCCAGCGAAACCGATCCGGAGATCGACGGGCCGGTGATCATCCGCC
ATGCCGGCGACCTGCCGGACGGGCTGGCATTGCATATGAAGCCGCTGATCGAGTGGCATTTTTCCGGCGTTGACTAA

Upstream 100 bases:

>100_bases
TCGGCCGAAAGCGTCGGACCATTGCCCGGTGGCGATCACGCTGGACATGGCTCGATAGGCAAGATTTGGCCTCGATAGGC
AGGATTGGGACCTGATACGC

Downstream 100 bases:

>100_bases
CGGCGCGCCTTGTCCTGTGCCGCCTTGCGATCGTTGCGGGCCGCGACGAAGAACATGATAAAGCCGATACCCAGCAAGCC
GCCCATGGCCATTCCCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Acetyltransferase GNAT Family; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; NUDIX Hydrolase Family Protein; Nudix Hydrolase; NTP Pyrophosphohydrolase Protein

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MSFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQLAYRDNRLVGRCHAVNYSTFM
LWRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAGRVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAA
RRGVRWHALSTTRGTVIFRRYHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD

Sequences:

>Translated_238_residues
MSFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQLAYRDNRLVGRCHAVNYSTFM
LWRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAGRVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAA
RRGVRWHALSTTRGTVIFRRYHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD
>Mature_237_residues
SFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQLAYRDNRLVGRCHAVNYSTFML
WRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAGRVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAAR
RGVRWHALSTTRGTVIFRRYHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26630; Mature: 26499

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQL
CCCCCCCCEEEECCEEEEEECCCCCCCHHCHHHHHHHHHHHHEEECCCCCCCHHHHHHHH
AYRDNRLVGRCHAVNYSTFMLWRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAG
HHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHEEEEEECCCEEEEEEECCEEECCC
RVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAARRGVRWHALSTTRGTVIFRR
EEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCEEEEEE
YHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD
ECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEECCCCC
>Mature Secondary Structure 
SFDLPRNVILPVDAIDVRLDSGPHPFARENAEAIAENWQREIAVKPALFDGTVVLLSQL
CCCCCCCEEEECCEEEEEECCCCCCCHHCHHHHHHHHHHHHEEECCCCCCCHHHHHHHH
AYRDNRLVGRCHAVNYSTFMLWRKRRENSGAEHAYAHAMLVAGDSALVAIRMGSHTVNAG
HHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHEEEEEECCCEEEEEEECCEEECCC
RVYFAAGSFEPDDFRDGQVDVDFNMIREVREETGLDLSAARRGVRWHALSTTRGTVIFRR
EEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHCCEEEEEECCCCCEEEEEE
YHVDEPADEIARRISAFVASETDPEIDGPVIIRHAGDLPDGLALHMKPLIEWHFSGVD
ECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA