Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471323

Identifier: 13471323

GI number: 13471323

Start: 1062309

End: 1062758

Strand: Reverse

Name: 13471323

Synonym: mll1264

Alternate gene names: NA

Gene position: 1062758-1062309 (Counterclockwise)

Preceding gene: 13471324

Following gene: 13471322

Centisome position: 15.1

GC content: 58.0

Gene sequence:

>450_bases
GTGGGCGCGCGGGGCATGAAATATATCGTCTTCATTCTCTTTACGGTCATGACCAATGCCGCCGCGCAGCTCATGCTGAA
GCAAGGCATGATGTCGCTTGGACCGATCTCGTTCGAGGGCGTCAATCCGCTCTTCAAGCTGCTGCAGATCGTCTTCAGCC
CCTGGGTGTTCCTGGGACTTTGCACCTTCGTGATTTCCATGGCCTCGCACCTCTATGTGCTGTCCAAGGTCGAGCTTTCC
TTCGCCTATCCCTTCCTCAGCCTTGCCTATGTCGCCGTCGCCATCTTCGCCTATTTCGTGTTCCGCGAGGATATCAATGG
CTGGCGCATCGCCGGCATCGCCTTCATCTGCGTCGGCACCGTGCTGATCGCGCAAAGTGGGCGAGGGCATGAGGACCAGA
CCGCTTCCATCACGCCCGACAAGACCCAGATAAGCGAGACCGTTCGATGA

Upstream 100 bases:

>100_bases
GAATGAATCGTAGTTAGCGAATGATTAACGGCAAGTTTACTCAAAACAGTCTTGTGAGTTCACGAAATCTTTTCGGGTTT
GTATTACTAGAAATCACGGG

Downstream 100 bases:

>100_bases
GACATGTGATTTTCGGCGGTGACGGCTTCGTCGGCCGTCACCTTGCCCCGAAGCTTGTGGCGGATGGCGAAGAGGTAATC
GTCGCCGACATCGCCAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MGARGMKYIVFILFTVMTNAAAQLMLKQGMMSLGPISFEGVNPLFKLLQIVFSPWVFLGLCTFVISMASHLYVLSKVELS
FAYPFLSLAYVAVAIFAYFVFREDINGWRIAGIAFICVGTVLIAQSGRGHEDQTASITPDKTQISETVR

Sequences:

>Translated_149_residues
MGARGMKYIVFILFTVMTNAAAQLMLKQGMMSLGPISFEGVNPLFKLLQIVFSPWVFLGLCTFVISMASHLYVLSKVELS
FAYPFLSLAYVAVAIFAYFVFREDINGWRIAGIAFICVGTVLIAQSGRGHEDQTASITPDKTQISETVR
>Mature_148_residues
GARGMKYIVFILFTVMTNAAAQLMLKQGMMSLGPISFEGVNPLFKLLQIVFSPWVFLGLCTFVISMASHLYVLSKVELSF
AYPFLSLAYVAVAIFAYFVFREDINGWRIAGIAFICVGTVLIAQSGRGHEDQTASITPDKTQISETVR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16474; Mature: 16343

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARGMKYIVFILFTVMTNAAAQLMLKQGMMSLGPISFEGVNPLFKLLQIVFSPWVFLGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CTFVISMASHLYVLSKVELSFAYPFLSLAYVAVAIFAYFVFREDINGWRIAGIAFICVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLIAQSGRGHEDQTASITPDKTQISETVR
HHHHCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
GARGMKYIVFILFTVMTNAAAQLMLKQGMMSLGPISFEGVNPLFKLLQIVFSPWVFLGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CTFVISMASHLYVLSKVELSFAYPFLSLAYVAVAIFAYFVFREDINGWRIAGIAFICVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLIAQSGRGHEDQTASITPDKTQISETVR
HHHHCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA