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The map label for this gene is yliC [C]

Identifier: 13471267

GI number: 13471267

Start: 999803

End: 1000750

Strand: Direct

Name: yliC [C]

Synonym: mlr1187

Alternate gene names: 13471267

Gene position: 999803-1000750 (Clockwise)

Preceding gene: 13471266

Following gene: 13471268

Centisome position: 14.21

GC content: 65.82

Gene sequence:

>948_bases
ATGACCGCATACCTCCTCAAGCGCCTCGCCATCTCGCTTGCCACGCTGGTGCTGGCCTCCATCGTGGTGTTCGCCGTGCT
GGAAATCCTGCCGGGCGACCCGGCGCGGCTGATGCTGGGCATGAACGCCAGCGCCGACCAGGTCGAACTCTTGCGCAACC
AGATGGGCCTGAACGCGCCCCTCCTCTTGCGCTATCTGCACTGGGCCGGCGGCCTGCTCAGCCTCGATTTTGGCCGCTCT
TACACCTATTCGGTGCCGGTCCTCGATCTCGTGCGTGAACGGCTTGCCGTGTCGCTGCCGCTGGCGCTGATCGCGCTTGC
GCTCTCCACGATCATCGCCATTCCGGTCGGCCTGTTTTCCGCCAGCCGGCGCGGCCGGGCCGGCGACACGATTTCCATGG
GCGCGGCACAGCTTGGCGTGGCCGTCCCCAATTTCTGGTTCGCGCTGATGCTGATCTATGTCTTCGCCGTCTGGCTGCGG
CTGGTGCCGGCCGGCGGCTTTCCCGGCTGGAGCGCCGGCATATCGCCTGCGCTGAAATCGCTGCTGCTGCCGGCGGTGGC
GCTTGCCTTGCCGCAGGCGGCGATCCTGGCGCGCGTCACCCGCTCGGCACTGATCGAGGTGCTGAACGAGGATTATATCC
GCACCGCCCGCGCCAAGGGCCTGCCCTATCGCGCCGTGCTGTGGCGGCATGCACTGCGCAACGCCATGATCCCGGTGCTG
ACCATTCTCGGGCTGCAATTCGCCTTCCTGCTCGCCGGCACCATCATCATCGAGAATGTCTTTTATCTCCCCGGCCTCGG
CCGGCTGGTGTTCCAGGCGATCACCCAGCGCGACCTGATCGTCGTTGAAAGCGTCGTGATGTTGCTGGTCGCCGCCGTCA
TTGCCGTCAACCTCGTCGTCGACCTTTCCTATGCGGTGGTCGATCCCCGCCTGAGAAGCCGGCAATGA

Upstream 100 bases:

>100_bases
CCTCTTCGACCTCTGTCACGGAATGGATCCTGGGGTCTACGCGACGGAGCTTCGCTCCTGCTTCGCCCCAAGATGACGAC
ACCTCTGTCGTCCCGTGTCC

Downstream 100 bases:

>100_bases
CCCTGCACATCGACATCCCTGAAGAGACGTTGAGTGGCATTCTGGCCAAGGCGTTCCGGAACACGGCTTTCGTCACCGGC
TTCGTCATCACCGTGCTGAT

Product: permease protein of oligopeptide ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTAYLLKRLAISLATLVLASIVVFAVLEILPGDPARLMLGMNASADQVELLRNQMGLNAPLLLRYLHWAGGLLSLDFGRS
YTYSVPVLDLVRERLAVSLPLALIALALSTIIAIPVGLFSASRRGRAGDTISMGAAQLGVAVPNFWFALMLIYVFAVWLR
LVPAGGFPGWSAGISPALKSLLLPAVALALPQAAILARVTRSALIEVLNEDYIRTARAKGLPYRAVLWRHALRNAMIPVL
TILGLQFAFLLAGTIIIENVFYLPGLGRLVFQAITQRDLIVVESVVMLLVAAVIAVNLVVDLSYAVVDPRLRSRQ

Sequences:

>Translated_315_residues
MTAYLLKRLAISLATLVLASIVVFAVLEILPGDPARLMLGMNASADQVELLRNQMGLNAPLLLRYLHWAGGLLSLDFGRS
YTYSVPVLDLVRERLAVSLPLALIALALSTIIAIPVGLFSASRRGRAGDTISMGAAQLGVAVPNFWFALMLIYVFAVWLR
LVPAGGFPGWSAGISPALKSLLLPAVALALPQAAILARVTRSALIEVLNEDYIRTARAKGLPYRAVLWRHALRNAMIPVL
TILGLQFAFLLAGTIIIENVFYLPGLGRLVFQAITQRDLIVVESVVMLLVAAVIAVNLVVDLSYAVVDPRLRSRQ
>Mature_314_residues
TAYLLKRLAISLATLVLASIVVFAVLEILPGDPARLMLGMNASADQVELLRNQMGLNAPLLLRYLHWAGGLLSLDFGRSY
TYSVPVLDLVRERLAVSLPLALIALALSTIIAIPVGLFSASRRGRAGDTISMGAAQLGVAVPNFWFALMLIYVFAVWLRL
VPAGGFPGWSAGISPALKSLLLPAVALALPQAAILARVTRSALIEVLNEDYIRTARAKGLPYRAVLWRHALRNAMIPVLT
ILGLQFAFLLAGTIIIENVFYLPGLGRLVFQAITQRDLIVVESVVMLLVAAVIAVNLVVDLSYAVVDPRLRSRQ

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=314, Percent_Identity=39.8089171974522, Blast_Score=231, Evalue=5e-62,
Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=36.8731563421829, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1789888, Length=318, Percent_Identity=36.1635220125786, Blast_Score=198, Evalue=4e-52,
Organism=Escherichia coli, GI1787497, Length=314, Percent_Identity=36.3057324840764, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1787761, Length=334, Percent_Identity=37.4251497005988, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1788504, Length=359, Percent_Identity=28.133704735376, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1787550, Length=274, Percent_Identity=30.6569343065693, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34053; Mature: 33922

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYLLKRLAISLATLVLASIVVFAVLEILPGDPARLMLGMNASADQVELLRNQMGLNAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHHCCCHH
LLLRYLHWAGGLLSLDFGRSYTYSVPVLDLVRERLAVSLPLALIALALSTIIAIPVGLFS
HHHHHHHHHCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRRGRAGDTISMGAAQLGVAVPNFWFALMLIYVFAVWLRLVPAGGFPGWSAGISPALKS
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LLLPAVALALPQAAILARVTRSALIEVLNEDYIRTARAKGLPYRAVLWRHALRNAMIPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TILGLQFAFLLAGTIIIENVFYLPGLGRLVFQAITQRDLIVVESVVMLLVAAVIAVNLVV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLSYAVVDPRLRSRQ
HHHHHHHCCHHHCCC
>Mature Secondary Structure 
TAYLLKRLAISLATLVLASIVVFAVLEILPGDPARLMLGMNASADQVELLRNQMGLNAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHHCCCHH
LLLRYLHWAGGLLSLDFGRSYTYSVPVLDLVRERLAVSLPLALIALALSTIIAIPVGLFS
HHHHHHHHHCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRRGRAGDTISMGAAQLGVAVPNFWFALMLIYVFAVWLRLVPAGGFPGWSAGISPALKS
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LLLPAVALALPQAAILARVTRSALIEVLNEDYIRTARAKGLPYRAVLWRHALRNAMIPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
TILGLQFAFLLAGTIIIENVFYLPGLGRLVFQAITQRDLIVVESVVMLLVAAVIAVNLVV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLSYAVVDPRLRSRQ
HHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]