| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is gsiD [H]
Identifier: 13471268
GI number: 13471268
Start: 1000747
End: 1001616
Strand: Direct
Name: gsiD [H]
Synonym: mlr1189
Alternate gene names: 13471268
Gene position: 1000747-1001616 (Clockwise)
Preceding gene: 13471267
Following gene: 13471269
Centisome position: 14.22
GC content: 64.71
Gene sequence:
>870_bases ATGACCCTGCACATCGACATCCCTGAAGAGACGTTGAGTGGCATTCTGGCCAAGGCGTTCCGGAACACGGCTTTCGTCAC CGGCTTCGTCATCACCGTGCTGATCCTGGCGATGGCTCTCGTGTCCTATCCCTGGACGCCCTACGATGTGACGAAGCTGG TCATAGCCGACAAGACGCAAGGCCCCTCGCTGGCACATTGGTTCGGGACCGACCATTTCGGCCGCGACATCCTGTCGATG ATCATGGTCGGCGCCCGCAATTCGATCGCCGTGGCGCTGGTCGCGGTCGGCATCGGCATGGGCGTCGGCGTGCCGCTCGG CGCTTTTGCGGCCGCGCGCGGCGGCCTCGTCGACGAGGCGCTGATGCGCGTCAACGACCTCGTCTTTGCTTTCCCCGCGC TGCTGTCGGCCATCATGATTACCGCCATCTTCGGGCCGGGCGCCGTCAACGCCATCATCGCCATCGGCATCTTCAACATC CCGGTCTTTGCCCGCGTCGCCCGCGCCGGAGCGCTGGCCATCTGGCCGCGCGAATTCATCCTGGCCGCGCGCGCCGCAGG AAAAAGCAGCACGCAGATATCGATCGAACATGTGCTGCCCAACATCGCAACGCTGCTCCTGGTGCAAGGCACCATACAGT TCGCGCTGGGCATCCTCGCCGAAGCCGGGCTTTCCTATCTCGGCCTCGGCGCGCAGCCGCCAATGCCGAGTTGGGGCCGC ATGCTGTTCGACGCACAGACGCGCATGGTGGTGGCGCCATGGATGGCGATCTTTCCCGGCATGGCGATCGTCATCACCGT GCTCGGGCTCAATCTCCTGGGCGACGGCATCGCCGACATTCTCGACCCGAAATCGCGGCGGCAGCGATGA
Upstream 100 bases:
>100_bases TTGAAAGCGTCGTGATGTTGCTGGTCGCCGCCGTCATTGCCGTCAACCTCGTCGTCGACCTTTCCTATGCGGTGGTCGAT CCCCGCCTGAGAAGCCGGCA
Downstream 100 bases:
>100_bases GCTTGCTGGAAATCGACAACCTGTCGCTGACCATCGGCGACACGCAGATCCTGAAGGACATGGAACTCTCCGTCGCGCCC GGCGAGGTGATGGGGCTGGT
Product: permease protein of oligopeptide ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTLHIDIPEETLSGILAKAFRNTAFVTGFVITVLILAMALVSYPWTPYDVTKLVIADKTQGPSLAHWFGTDHFGRDILSM IMVGARNSIAVALVAVGIGMGVGVPLGAFAAARGGLVDEALMRVNDLVFAFPALLSAIMITAIFGPGAVNAIIAIGIFNI PVFARVARAGALAIWPREFILAARAAGKSSTQISIEHVLPNIATLLLVQGTIQFALGILAEAGLSYLGLGAQPPMPSWGR MLFDAQTRMVVAPWMAIFPGMAIVITVLGLNLLGDGIADILDPKSRRQR
Sequences:
>Translated_289_residues MTLHIDIPEETLSGILAKAFRNTAFVTGFVITVLILAMALVSYPWTPYDVTKLVIADKTQGPSLAHWFGTDHFGRDILSM IMVGARNSIAVALVAVGIGMGVGVPLGAFAAARGGLVDEALMRVNDLVFAFPALLSAIMITAIFGPGAVNAIIAIGIFNI PVFARVARAGALAIWPREFILAARAAGKSSTQISIEHVLPNIATLLLVQGTIQFALGILAEAGLSYLGLGAQPPMPSWGR MLFDAQTRMVVAPWMAIFPGMAIVITVLGLNLLGDGIADILDPKSRRQR >Mature_288_residues TLHIDIPEETLSGILAKAFRNTAFVTGFVITVLILAMALVSYPWTPYDVTKLVIADKTQGPSLAHWFGTDHFGRDILSMI MVGARNSIAVALVAVGIGMGVGVPLGAFAAARGGLVDEALMRVNDLVFAFPALLSAIMITAIFGPGAVNAIIAIGIFNIP VFARVARAGALAIWPREFILAARAAGKSSTQISIEHVLPNIATLLLVQGTIQFALGILAEAGLSYLGLGAQPPMPSWGRM LFDAQTRMVVAPWMAIFPGMAIVITVLGLNLLGDGIADILDPKSRRQR
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=267, Percent_Identity=43.0711610486891, Blast_Score=217, Evalue=8e-58, Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=38.6973180076628, Blast_Score=177, Evalue=5e-46, Organism=Escherichia coli, GI1789964, Length=228, Percent_Identity=43.421052631579, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=34.5679012345679, Blast_Score=157, Evalue=8e-40, Organism=Escherichia coli, GI1787498, Length=269, Percent_Identity=34.5724907063197, Blast_Score=144, Evalue=9e-36, Organism=Escherichia coli, GI1787549, Length=276, Percent_Identity=32.9710144927536, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=28.7610619469027, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30540; Mature: 30409
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHIDIPEETLSGILAKAFRNTAFVTGFVITVLILAMALVSYPWTPYDVTKLVIADKTQ CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCC GPSLAHWFGTDHFGRDILSMIMVGARNSIAVALVAVGIGMGVGVPLGAFAAARGGLVDEA CCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHH LMRVNDLVFAFPALLSAIMITAIFGPGAVNAIIAIGIFNIPVFARVARAGALAIWPREFI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHH LAARAAGKSSTQISIEHVLPNIATLLLVQGTIQFALGILAEAGLSYLGLGAQPPMPSWGR HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHH MLFDAQTRMVVAPWMAIFPGMAIVITVLGLNLLGDGIADILDPKSRRQR HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHCCCHHHCCC >Mature Secondary Structure TLHIDIPEETLSGILAKAFRNTAFVTGFVITVLILAMALVSYPWTPYDVTKLVIADKTQ EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEECCCC GPSLAHWFGTDHFGRDILSMIMVGARNSIAVALVAVGIGMGVGVPLGAFAAARGGLVDEA CCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHH LMRVNDLVFAFPALLSAIMITAIFGPGAVNAIIAIGIFNIPVFARVARAGALAIWPREFI HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHH LAARAAGKSSTQISIEHVLPNIATLLLVQGTIQFALGILAEAGLSYLGLGAQPPMPSWGR HHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHH MLFDAQTRMVVAPWMAIFPGMAIVITVLGLNLLGDGIADILDPKSRRQR HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]