| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is hmuT [H]
Identifier: 13471235
GI number: 13471235
Start: 964017
End: 964892
Strand: Reverse
Name: hmuT [H]
Synonym: mll1151
Alternate gene names: 13471235
Gene position: 964892-964017 (Counterclockwise)
Preceding gene: 13471236
Following gene: 13471234
Centisome position: 13.71
GC content: 64.27
Gene sequence:
>876_bases ATGCGCCGATCGATGTTTGCCCCGATCGTCGGCCTTTCCCTTGCCGCGCTGCAGCCGGCCGGCGCCGCCGAGGGCGTCTC GGTCTTCTCGGATCCGTCGAAGATCGCCGCCATAGGCGGTTCGATCACGGAAATCGTCTACGCGCTTGGCGAGGAGAAGC GCCTGGTGGCGCGCGATTCCACCAGCAATTATCCGAAAGCGGCGCTTGCCTTGCCCGATGTCGGTTATATGCGCGCGCTG TCGCCGGAAGGCGTGCTGTCGGTCAATCCGACCGGCATCCTGACGCTGCACGGAAGCGGCCCCAAGGAAGCCGTCGATGT GCTGAAGAAAACCAGCATCCCCTTCATCGAAGTGCCCGAGCATTATAGCCACGACGGCATCCTCGAGAAGGTCCGCATCG TCGGTAAGGCGCTTGGCGTCGATGCCAAGGCCGAGGTGCTGGCCAAGGAGCTCGATGCCAAGCTGACATCAGCCGAAAAG CAGACAGCCTCGATCAAGGAGCGCAAGCGCATCCTGTTCGTGCTGTCGCTGCAGGGCGGCAAGATCCTGGCGGCCGGCAG CGAAACCGCGGCCGACGGCATGGTCAAGCTGGCAGGCGGGGTCAACGCCGTCGATGGCTTCTCCGGCTACAAGCAGATGT CCGACGAGGCAATCATTACCGCCAGGCCTGACGTGATCCTGATGATGAGCAATGCCGGGCCGCCGGTGTCGGACGACGAA TTGTTCGGCACCCCGTCGATCGCCTCGACGCCGGCCGGAACCGCGCGCAAGCTGATCCGCATCGATGGCGGCTATCTGCT CGGCTTCGGGCCACGCACGGCCGACGCCATTCACGACCTCGCCGTCTCGCTCTATGGCGCTGAAGTCACGGACTGA
Upstream 100 bases:
>100_bases GCGACGATTGGCGGTTCCTGGCCGAGAACCTGCCGCGTATTCCAAGCCCGACGGCAGCGTGAGGAACAGTGTGATGCGGT TTTTCCCGACCCTGCCGGCC
Downstream 100 bases:
>100_bases GCGGGCAGATCATGGTCGATCAATCGATCGCCGGCCCGGTGAAGGTCATGGCGAATGCATCCGAAGGTGACCGCTCCGGC CGCGCCCGCATCGTCATCCT
Product: hemin binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRRSMFAPIVGLSLAALQPAGAAEGVSVFSDPSKIAAIGGSITEIVYALGEEKRLVARDSTSNYPKAALALPDVGYMRAL SPEGVLSVNPTGILTLHGSGPKEAVDVLKKTSIPFIEVPEHYSHDGILEKVRIVGKALGVDAKAEVLAKELDAKLTSAEK QTASIKERKRILFVLSLQGGKILAAGSETAADGMVKLAGGVNAVDGFSGYKQMSDEAIITARPDVILMMSNAGPPVSDDE LFGTPSIASTPAGTARKLIRIDGGYLLGFGPRTADAIHDLAVSLYGAEVTD
Sequences:
>Translated_291_residues MRRSMFAPIVGLSLAALQPAGAAEGVSVFSDPSKIAAIGGSITEIVYALGEEKRLVARDSTSNYPKAALALPDVGYMRAL SPEGVLSVNPTGILTLHGSGPKEAVDVLKKTSIPFIEVPEHYSHDGILEKVRIVGKALGVDAKAEVLAKELDAKLTSAEK QTASIKERKRILFVLSLQGGKILAAGSETAADGMVKLAGGVNAVDGFSGYKQMSDEAIITARPDVILMMSNAGPPVSDDE LFGTPSIASTPAGTARKLIRIDGGYLLGFGPRTADAIHDLAVSLYGAEVTD >Mature_291_residues MRRSMFAPIVGLSLAALQPAGAAEGVSVFSDPSKIAAIGGSITEIVYALGEEKRLVARDSTSNYPKAALALPDVGYMRAL SPEGVLSVNPTGILTLHGSGPKEAVDVLKKTSIPFIEVPEHYSHDGILEKVRIVGKALGVDAKAEVLAKELDAKLTSAEK QTASIKERKRILFVLSLQGGKILAAGSETAADGMVKLAGGVNAVDGFSGYKQMSDEAIITARPDVILMMSNAGPPVSDDE LFGTPSIASTPAGTARKLIRIDGGYLLGFGPRTADAIHDLAVSLYGAEVTD
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG4558
COG function: function code P; ABC-type hemin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 30256; Mature: 30256
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSMFAPIVGLSLAALQPAGAAEGVSVFSDPSKIAAIGGSITEIVYALGEEKRLVARDS CCCCHHCHHHHHHHHHCCCCCCCCCCEECCCCHHHEECCCHHHHHHHHHCCCCEEEEECC TSNYPKAALALPDVGYMRALSPEGVLSVNPTGILTLHGSGPKEAVDVLKKTSIPFIEVPE CCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCCEEECCC HYSHDGILEKVRIVGKALGVDAKAEVLAKELDAKLTSAEKQTASIKERKRILFVLSLQGG CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCC KILAAGSETAADGMVKLAGGVNAVDGFSGYKQMSDEAIITARPDVILMMSNAGPPVSDDE EEEEECCCCHHCCEEEECCCCCCCCCCHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCC LFGTPSIASTPAGTARKLIRIDGGYLLGFGPRTADAIHDLAVSLYGAEVTD CCCCCCCCCCCCHHHEEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRRSMFAPIVGLSLAALQPAGAAEGVSVFSDPSKIAAIGGSITEIVYALGEEKRLVARDS CCCCHHCHHHHHHHHHCCCCCCCCCCEECCCCHHHEECCCHHHHHHHHHCCCCEEEEECC TSNYPKAALALPDVGYMRALSPEGVLSVNPTGILTLHGSGPKEAVDVLKKTSIPFIEVPE CCCCCCEEEECCCCHHHHCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHCCCCEEECCC HYSHDGILEKVRIVGKALGVDAKAEVLAKELDAKLTSAEKQTASIKERKRILFVLSLQGG CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCC KILAAGSETAADGMVKLAGGVNAVDGFSGYKQMSDEAIITARPDVILMMSNAGPPVSDDE EEEEECCCCHHCCEEEECCCCCCCCCCHHHHHCCCCEEEEECCCEEEEEECCCCCCCCCC LFGTPSIASTPAGTARKLIRIDGGYLLGFGPRTADAIHDLAVSLYGAEVTD CCCCCCCCCCCCHHHEEEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]