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The map label for this gene is hmuS [H]

Identifier: 13471236

GI number: 13471236

Start: 964931

End: 965992

Strand: Reverse

Name: hmuS [H]

Synonym: mll1152

Alternate gene names: 13471236

Gene position: 965992-964931 (Counterclockwise)

Preceding gene: 13471237

Following gene: 13471235

Centisome position: 13.73

GC content: 62.9

Gene sequence:

>1062_bases
ATGGACCAGCGCGTAAAACCCGCCCCGCATGAAATCCGGCGGGCACGGACAGAAAATCCGAAGACGCGCGAGCGTGACCT
GGCCGCCCAGCTCGGCATTTCGGAAGCCGAGTTGGTCGCCGCGCATTGCGGCGACGGCGTCGTTCGGATCGAACCGCGCG
TCAACGATCTCTTGACCGGTCTCGAGGCGGTCGGCGAGGTGATGGCGCTGACCCGCAACGAAAGCGCCGTGCACGAAAAG
ATCGGCGTCTATGACAAGGTCGTCACGGGCAACCACAATGCCATGGTGCTTGGCGAGAATATCGACCTGCGCATCTTCCC
AAAGGTCTGGGCGCATGGCTTTGCCGTGGAGAAGCGCGACGGCGACGAGATCCGCCGTAGCCTGCAGTTCTTCGACGCGA
CGGGCAAGGCGGTGCACAAGGTGCATCTGCGTCCGGCCTCCAGTCTCTATGCCTACCAGAAGCTGGTCGCTTCGCTGGAA
TCGTCCAACCAGGAACCGACGGTCGATATTTCAGGGTCGATCTCCGACGATCGGAGCGAGGCCGGGGCAACCGCCGTCAG
CCCTGACGATCTGCGCGACCGCTGGAGCCGGCTGACCGACGTGCACCAGTTCTTCGGTATGCTGAAGACGCTGAAGCTCA
GCCGCCGTCAGGCTGTGCGCATGGTCGGAACGGACTATGCCTGGCTGCTCGACAATGATGCGGTCGGCGCCATGTTCCAC
CATGCCGCCGAAGGCGAGATGCCGATCATGTGCTTCGTCGGCAACCGCGGCTGCATCCAGATCCATTCCGGACCGGTCAG
GTCGATCAAGCCGATGGGACCGTGGATCAACGTTCTGGACGAGACCTTCCACCTGCATCTACGCACCGACCACATCCAAG
AAGTCTGGGCGGTGCGCAAGCCGACCAAGGATGGTCATGTCACCTCGCTCGAGGTCTATGCCGCCGACGGCGAGATGATC
ATCCAGTTCTTCGGCAAGCGCCATGAAGGCGAGAGCGAGCGCGACGATTGGCGGTTCCTGGCCGAGAACCTGCCGCGTAT
TCCAAGCCCGACGGCAGCGTGA

Upstream 100 bases:

>100_bases
GAGATCGGCATCGAGCATCATGGCGCGCTCTACCGGCTGAAGATCACCCGGCAGGGCAAGCTCATTCTCAACAAGTAAGG
CAAGGCAGTAGGGACGAGAC

Downstream 100 bases:

>100_bases
GGAACAGTGTGATGCGGTTTTTCCCGACCCTGCCGGCCATGCGCCGATCGATGTTTGCCCCGATCGTCGGCCTTTCCCTT
GCCGCGCTGCAGCCGGCCGG

Product: hemin degrading factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MDQRVKPAPHEIRRARTENPKTRERDLAAQLGISEAELVAAHCGDGVVRIEPRVNDLLTGLEAVGEVMALTRNESAVHEK
IGVYDKVVTGNHNAMVLGENIDLRIFPKVWAHGFAVEKRDGDEIRRSLQFFDATGKAVHKVHLRPASSLYAYQKLVASLE
SSNQEPTVDISGSISDDRSEAGATAVSPDDLRDRWSRLTDVHQFFGMLKTLKLSRRQAVRMVGTDYAWLLDNDAVGAMFH
HAAEGEMPIMCFVGNRGCIQIHSGPVRSIKPMGPWINVLDETFHLHLRTDHIQEVWAVRKPTKDGHVTSLEVYAADGEMI
IQFFGKRHEGESERDDWRFLAENLPRIPSPTAA

Sequences:

>Translated_353_residues
MDQRVKPAPHEIRRARTENPKTRERDLAAQLGISEAELVAAHCGDGVVRIEPRVNDLLTGLEAVGEVMALTRNESAVHEK
IGVYDKVVTGNHNAMVLGENIDLRIFPKVWAHGFAVEKRDGDEIRRSLQFFDATGKAVHKVHLRPASSLYAYQKLVASLE
SSNQEPTVDISGSISDDRSEAGATAVSPDDLRDRWSRLTDVHQFFGMLKTLKLSRRQAVRMVGTDYAWLLDNDAVGAMFH
HAAEGEMPIMCFVGNRGCIQIHSGPVRSIKPMGPWINVLDETFHLHLRTDHIQEVWAVRKPTKDGHVTSLEVYAADGEMI
IQFFGKRHEGESERDDWRFLAENLPRIPSPTAA
>Mature_353_residues
MDQRVKPAPHEIRRARTENPKTRERDLAAQLGISEAELVAAHCGDGVVRIEPRVNDLLTGLEAVGEVMALTRNESAVHEK
IGVYDKVVTGNHNAMVLGENIDLRIFPKVWAHGFAVEKRDGDEIRRSLQFFDATGKAVHKVHLRPASSLYAYQKLVASLE
SSNQEPTVDISGSISDDRSEAGATAVSPDDLRDRWSRLTDVHQFFGMLKTLKLSRRQAVRMVGTDYAWLLDNDAVGAMFH
HAAEGEMPIMCFVGNRGCIQIHSGPVRSIKPMGPWINVLDETFHLHLRTDHIQEVWAVRKPTKDGHVTSLEVYAADGEMI
IQFFGKRHEGESERDDWRFLAENLPRIPSPTAA

Specific function: Part of the binding-protein-dependent transport system for hemin [H]

COG id: COG3720

COG function: function code P; Putative heme degradation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Y.enterocolitica hemS [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007845 [H]

Pfam domain/function: PF05171 HemS [H]

EC number: NA

Molecular weight: Translated: 39507; Mature: 39507

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRVKPAPHEIRRARTENPKTRERDLAAQLGISEAELVAAHCGDGVVRIEPRVNDLLTG
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCHHHHHHH
LEAVGEVMALTRNESAVHEKIGVYDKVVTGNHNAMVLGENIDLRIFPKVWAHGFAVEKRD
HHHHHHHHHHHCCCHHHHHHHCCHHEEEECCCCEEEEECCCCEEEEHHHHHCCCEEECCC
GDEIRRSLQFFDATGKAVHKVHLRPASSLYAYQKLVASLESSNQEPTVDISGSISDDRSE
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH
AGATAVSPDDLRDRWSRLTDVHQFFGMLKTLKLSRRQAVRMVGTDYAWLLDNDAVGAMFH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
HAAEGEMPIMCFVGNRGCIQIHSGPVRSIKPMGPWINVLDETFHLHLRTDHIQEVWAVRK
HCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHCHHEEEEEEHHHHHHHHHHCC
PTKDGHVTSLEVYAADGEMIIQFFGKRHEGESERDDWRFLAENLPRIPSPTAA
CCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDQRVKPAPHEIRRARTENPKTRERDLAAQLGISEAELVAAHCGDGVVRIEPRVNDLLTG
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCHHHHHHH
LEAVGEVMALTRNESAVHEKIGVYDKVVTGNHNAMVLGENIDLRIFPKVWAHGFAVEKRD
HHHHHHHHHHHCCCHHHHHHHCCHHEEEECCCCEEEEECCCCEEEEHHHHHCCCEEECCC
GDEIRRSLQFFDATGKAVHKVHLRPASSLYAYQKLVASLESSNQEPTVDISGSISDDRSE
HHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH
AGATAVSPDDLRDRWSRLTDVHQFFGMLKTLKLSRRQAVRMVGTDYAWLLDNDAVGAMFH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
HAAEGEMPIMCFVGNRGCIQIHSGPVRSIKPMGPWINVLDETFHLHLRTDHIQEVWAVRK
HCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHCHHEEEEEEHHHHHHHHHHCC
PTKDGHVTSLEVYAADGEMIIQFFGKRHEGESERDDWRFLAENLPRIPSPTAA
CCCCCCEEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9026634; 11586360; 12142430 [H]