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The map label for this gene is nodN [H]

Identifier: 13471229

GI number: 13471229

Start: 958604

End: 959101

Strand: Reverse

Name: nodN [H]

Synonym: mll1143

Alternate gene names: 13471229

Gene position: 959101-958604 (Counterclockwise)

Preceding gene: 13471230

Following gene: 13471227

Centisome position: 13.63

GC content: 61.65

Gene sequence:

>498_bases
ATGAACGAAGTACGGCCTAAAACGCCGCCGACCTACGAGCAGTTGAGAACGATGTCCGGGCAGGAGCTCGGCGTCTCGGA
ATGGACCACGGTCGATCAGGACCGTATCAACCAATTCGCCGAGTGCACCGGCGATCATCAATGGATCCATGTCGACCCTG
AGCGCGCGCGGCGGCAAAGTCCGTTCCGCACCACGATCGCGCATGGCTATCTGACATTGTCGATCATCGGCGCGTTGGCG
CTCGGCATGGGCATCGTGCCGGAAAACACCCAGGCCGCCTTCAACTATGGCTTCGACAAGGTGCGTTTCCTGGCGCCGGT
CAAGGCCGGCGCGCGCATCAGATTGCGCACGGTTCTGCTTTCCATGGAGGACAGGGGGCCCGGCCAATATCTGATGAAGG
CAGCCAATACCGTCGAAATCGAAGGCGAGGAAAAGCCGGCGCTGACGGCCGAAACGCTGGTCATGCTCTATGAGCGCCGC
AAACGGGCGGGGGCCTGA

Upstream 100 bases:

>100_bases
GATTCAGCCGGAATTCGGCGGAACGGATTCGCAAGGGGTGAATTGACAGGGGCCATCCGTTCGTGGTCCGGAGGCACGGC
AAGCGATCGGGAAAGCAGGA

Downstream 100 bases:

>100_bases
GCGTTCGCCCAAGCCCCTGCAATGTCAGGCATTTCGCATTGAATGCCCCAATCGCGCATGTTTGACCGCGTTGCGGAATG
ACAACAGCGCGAGCAGCAAT

Product: nodulation protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNEVRPKTPPTYEQLRTMSGQELGVSEWTTVDQDRINQFAECTGDHQWIHVDPERARRQSPFRTTIAHGYLTLSIIGALA
LGMGIVPENTQAAFNYGFDKVRFLAPVKAGARIRLRTVLLSMEDRGPGQYLMKAANTVEIEGEEKPALTAETLVMLYERR
KRAGA

Sequences:

>Translated_165_residues
MNEVRPKTPPTYEQLRTMSGQELGVSEWTTVDQDRINQFAECTGDHQWIHVDPERARRQSPFRTTIAHGYLTLSIIGALA
LGMGIVPENTQAAFNYGFDKVRFLAPVKAGARIRLRTVLLSMEDRGPGQYLMKAANTVEIEGEEKPALTAETLVMLYERR
KRAGA
>Mature_165_residues
MNEVRPKTPPTYEQLRTMSGQELGVSEWTTVDQDRINQFAECTGDHQWIHVDPERARRQSPFRTTIAHGYLTLSIIGALA
LGMGIVPENTQAAFNYGFDKVRFLAPVKAGARIRLRTVLLSMEDRGPGQYLMKAANTVEIEGEEKPALTAETLVMLYERR
KRAGA

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.meliloti counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 18534; Mature: 18534

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEVRPKTPPTYEQLRTMSGQELGVSEWTTVDQDRINQFAECTGDHQWIHVDPERARRQS
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECHHHHHCCC
PFRTTIAHGYLTLSIIGALALGMGIVPENTQAAFNYGFDKVRFLAPVKAGARIRLRTVLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHEEEECCCCCCEEEEEEEEE
SMEDRGPGQYLMKAANTVEIEGEEKPALTAETLVMLYERRKRAGA
ECCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEVRPKTPPTYEQLRTMSGQELGVSEWTTVDQDRINQFAECTGDHQWIHVDPERARRQS
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECHHHHHCCC
PFRTTIAHGYLTLSIIGALALGMGIVPENTQAAFNYGFDKVRFLAPVKAGARIRLRTVLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHEEEECCCCCCEEEEEEEEE
SMEDRGPGQYLMKAANTVEIEGEEKPALTAETLVMLYERRKRAGA
ECCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3132583 [H]