Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13471230

Identifier: 13471230

GI number: 13471230

Start: 959361

End: 959843

Strand: Reverse

Name: 13471230

Synonym: mll1145

Alternate gene names: NA

Gene position: 959843-959361 (Counterclockwise)

Preceding gene: 13471231

Following gene: 13471229

Centisome position: 13.64

GC content: 61.08

Gene sequence:

>483_bases
GTGCTATGCTCCAGGCGAGGGCATCCGCATTTGCGGCAAAGGGGAGAAGACAGCATGGCCAGGCAACCGGAATCCGATTC
CTTCATGGACATGTTCGGCAGGTTCGGCCGCGACCTGAAGGTGCCAAATGTCGATGTCGAGGCGATCCTTGCCCATCACC
GCAAGAACCTCGAAGCCTTGGAGAAATCGGCGCGAGCCGGCGCCGCCGGCGCGACCTCGCTGTTGTCGAGGCAGCGCGAA
ATGCTGCAGGACACGCTGCGTGAAATTGCCGACATGGCGCAGAGCTACCGGGCGCCGGGCAACCCTCAGGAACTGATGGC
CAAGCAGACCGAATTCGCCAGGAAATCGTTCGAGGCCGCGCTTAAGAATACCGGTGAAGTGGCTGAACTGGCTCGCAAAT
CCGGAACCGAATCGATCGAAATCCTGCGCGCGCGCATCAAGGAGGCGATGGAGGAAATCCGCGCCGGCTACGGGCAGAAA
TAG

Upstream 100 bases:

>100_bases
CTGGCGGGTATCGTGCTCTATACGATCGAGCTGCTGCTCCCGGTCAATTGATGCGCATCGATCGTCAGGCCTGTGTTCGA
AATGGACAGGCGGCAGCCGA

Downstream 100 bases:

>100_bases
GCTTCCGCGGCTCGTCGTTTCGTCTTCGGCGGGACATGCCGGTTTGCAATTTGGCAACCTTGCGCATAGTTGCATCCCCG
CCACGCCGCAGTAGCCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phasin Family Protein; Magnetic Particle Membrane Specific GTPase P

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEALEKSARAGAAGATSLLSRQRE
MLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAALKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK

Sequences:

>Translated_160_residues
MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEALEKSARAGAAGATSLLSRQRE
MLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAALKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK
>Mature_160_residues
MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEALEKSARAGAAGATSLLSRQRE
MLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAALKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK

Specific function: Unknown

COG id: COG5490

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17958; Mature: 17958

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEAL
CCCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
EKSARAGAAGATSLLSRQREMLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK
HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEAL
CCCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
EKSARAGAAGATSLLSRQREMLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK
HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA