| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471230
Identifier: 13471230
GI number: 13471230
Start: 959361
End: 959843
Strand: Reverse
Name: 13471230
Synonym: mll1145
Alternate gene names: NA
Gene position: 959843-959361 (Counterclockwise)
Preceding gene: 13471231
Following gene: 13471229
Centisome position: 13.64
GC content: 61.08
Gene sequence:
>483_bases GTGCTATGCTCCAGGCGAGGGCATCCGCATTTGCGGCAAAGGGGAGAAGACAGCATGGCCAGGCAACCGGAATCCGATTC CTTCATGGACATGTTCGGCAGGTTCGGCCGCGACCTGAAGGTGCCAAATGTCGATGTCGAGGCGATCCTTGCCCATCACC GCAAGAACCTCGAAGCCTTGGAGAAATCGGCGCGAGCCGGCGCCGCCGGCGCGACCTCGCTGTTGTCGAGGCAGCGCGAA ATGCTGCAGGACACGCTGCGTGAAATTGCCGACATGGCGCAGAGCTACCGGGCGCCGGGCAACCCTCAGGAACTGATGGC CAAGCAGACCGAATTCGCCAGGAAATCGTTCGAGGCCGCGCTTAAGAATACCGGTGAAGTGGCTGAACTGGCTCGCAAAT CCGGAACCGAATCGATCGAAATCCTGCGCGCGCGCATCAAGGAGGCGATGGAGGAAATCCGCGCCGGCTACGGGCAGAAA TAG
Upstream 100 bases:
>100_bases CTGGCGGGTATCGTGCTCTATACGATCGAGCTGCTGCTCCCGGTCAATTGATGCGCATCGATCGTCAGGCCTGTGTTCGA AATGGACAGGCGGCAGCCGA
Downstream 100 bases:
>100_bases GCTTCCGCGGCTCGTCGTTTCGTCTTCGGCGGGACATGCCGGTTTGCAATTTGGCAACCTTGCGCATAGTTGCATCCCCG CCACGCCGCAGTAGCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phasin Family Protein; Magnetic Particle Membrane Specific GTPase P
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEALEKSARAGAAGATSLLSRQRE MLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAALKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK
Sequences:
>Translated_160_residues MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEALEKSARAGAAGATSLLSRQRE MLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAALKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK >Mature_160_residues MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEALEKSARAGAAGATSLLSRQRE MLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAALKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK
Specific function: Unknown
COG id: COG5490
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17958; Mature: 17958
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEAL CCCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH EKSARAGAAGATSLLSRQREMLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLCSRRGHPHLRQRGEDSMARQPESDSFMDMFGRFGRDLKVPNVDVEAILAHHRKNLEAL CCCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH EKSARAGAAGATSLLSRQREMLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKSFEAA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LKNTGEVAELARKSGTESIEILRARIKEAMEEIRAGYGQK HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA