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The map label for this gene is bepC [H]

Identifier: 13471200

GI number: 13471200

Start: 928816

End: 930216

Strand: Reverse

Name: bepC [H]

Synonym: mll1107

Alternate gene names: 13471200

Gene position: 930216-928816 (Counterclockwise)

Preceding gene: 13471201

Following gene: 13471199

Centisome position: 13.22

GC content: 64.1

Gene sequence:

>1401_bases
ATGAGGGATATACCCGTGCCGTCTGTATCCAAGACCCTTTTTGCCGCCGTCCTCGTCTCCGCGACCGCGCTGTCCCCACT
AGCCGCCTCGGCGGAAACCATCACCGGCGCGCTCGCCAAGGCCTATCAATACAATTCCACGCTGAATTCATCCCGCGCCG
GTGTGCGCGTCACAGACGAAGGCGTGGCCATTGCCAAATCGACCGGGCGTCCGACGATCACGGGATCGGCCTCGATCGAC
TACACAAACACGCGCCTGGCAAATGGCGGCGGCAACTCGAAGCTGACGTCCGGTAGCTACGGCATTCAGATCAACCAGTC
GCTGTTTGACGGCTTTCAGACGAAAAACAACGTGGCGGCGGCGGAATCCCAGGTGAAGGCGTCGGTGGAGAGCCTGCGCA
ACACCGAGGAAAACACGCTGTTCAGCGCGGCCACGGCCTATATGGACGTGATCCGGGACCGGCAGATCGCGGTGCTGACC
GAGCAGAACCTGCAGTTCCTGACCGAGCAGGCGCGTGCGGCAAGGTCACGTTTCGAAGTTGGCGAAGGTACCCGCACCGA
CGTCGCGCAGGCCGATGCGTCGCGCGCCTCGGCGGTGGCGTCGCTGAGTGCCGCACGCGCGCAGGCGCTGGCCAGTGCTG
CAACCTATCACCAGGTGGTCGGCGACGAGCCGGGCAAGCTCAAGCCCGCTGCGCCATTGGCCAAACTCTTGCCGTCGAGC
CTCGACGCGGCGATTGCGATCGGGGCGAATGAACATCCGGCCATTCTCGCTACGCAGCACCTGGTCGACGCGGCGGCGTT
TTCGGTGAAGTCGGCGGAAGGCGCGCTGTTGCCGCAACTGTCGGCGTCGGCCGGCGTCTCGGAGAACTATCGCAATGCCA
TCCCCGACCTCTCCGGTTCCAACGGAAATTCGACCTCGGCCAATATCGGCGCGACACTGACCATTCCGATCTATTCGGGC
GGTCGGACCCCGGCGCTCGTGCGCCAGAGCAAGGAATCGCTTGGCCAGGCCCGTATCCAGGTCGATGTCAGCCGTGACCA
GGTTCGCCAGGCGGTTGCCACCGCATGGTCGCAATACACCGCCGCGCAGCAGAGCGTCTCGGCCAACAGGCAGGTGATCG
ATGCCGCGCAACTGGCGCTGAACGGCGTCATCGAAGAGCGCAATGTCGGCCAGCGCACCACGCTCGACGTGCTCAACGCA
CAGGCTGCCGTCATCACGGCCAAGATCAACCAGGCCAATTCCGAACATGACGTGGTCGTGGCAAGCTACGCCATCCTGTC
GGCAATGGGGCGCCTGTCGGTTGACCGGCTTGCCTTGCAGGTCACCAAGTACAAGCCCGAAGAGCACTACAACGCCGTCA
AGGACAAGTGGTTCGGCCTGCGCACGCCGGACGGCCGCTAA

Upstream 100 bases:

>100_bases
CAGACTGGGGGCACTTTGGGACCGAGCGACAGGGAATGAGACACGCCACTCCGGCTGCTCTAACGAGAAGCTGGAGCGGC
GTAGTTCCCATGGAAAACGA

Downstream 100 bases:

>100_bases
ACGCCGGCGGCTCGACTTGCGTCGAGCCGCCCGAGCGCAACCTTGCTTGAAAACCGGTTCCGCTTCGGTTCGCGCCTGTC
TTTTCGCATTGGCGCGATTG

Product: outer membrane protein, nodT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MRDIPVPSVSKTLFAAVLVSATALSPLAASAETITGALAKAYQYNSTLNSSRAGVRVTDEGVAIAKSTGRPTITGSASID
YTNTRLANGGGNSKLTSGSYGIQINQSLFDGFQTKNNVAAAESQVKASVESLRNTEENTLFSAATAYMDVIRDRQIAVLT
EQNLQFLTEQARAARSRFEVGEGTRTDVAQADASRASAVASLSAARAQALASAATYHQVVGDEPGKLKPAAPLAKLLPSS
LDAAIAIGANEHPAILATQHLVDAAAFSVKSAEGALLPQLSASAGVSENYRNAIPDLSGSNGNSTSANIGATLTIPIYSG
GRTPALVRQSKESLGQARIQVDVSRDQVRQAVATAWSQYTAAQQSVSANRQVIDAAQLALNGVIEERNVGQRTTLDVLNA
QAAVITAKINQANSEHDVVVASYAILSAMGRLSVDRLALQVTKYKPEEHYNAVKDKWFGLRTPDGR

Sequences:

>Translated_466_residues
MRDIPVPSVSKTLFAAVLVSATALSPLAASAETITGALAKAYQYNSTLNSSRAGVRVTDEGVAIAKSTGRPTITGSASID
YTNTRLANGGGNSKLTSGSYGIQINQSLFDGFQTKNNVAAAESQVKASVESLRNTEENTLFSAATAYMDVIRDRQIAVLT
EQNLQFLTEQARAARSRFEVGEGTRTDVAQADASRASAVASLSAARAQALASAATYHQVVGDEPGKLKPAAPLAKLLPSS
LDAAIAIGANEHPAILATQHLVDAAAFSVKSAEGALLPQLSASAGVSENYRNAIPDLSGSNGNSTSANIGATLTIPIYSG
GRTPALVRQSKESLGQARIQVDVSRDQVRQAVATAWSQYTAAQQSVSANRQVIDAAQLALNGVIEERNVGQRTTLDVLNA
QAAVITAKINQANSEHDVVVASYAILSAMGRLSVDRLALQVTKYKPEEHYNAVKDKWFGLRTPDGR
>Mature_466_residues
MRDIPVPSVSKTLFAAVLVSATALSPLAASAETITGALAKAYQYNSTLNSSRAGVRVTDEGVAIAKSTGRPTITGSASID
YTNTRLANGGGNSKLTSGSYGIQINQSLFDGFQTKNNVAAAESQVKASVESLRNTEENTLFSAATAYMDVIRDRQIAVLT
EQNLQFLTEQARAARSRFEVGEGTRTDVAQADASRASAVASLSAARAQALASAATYHQVVGDEPGKLKPAAPLAKLLPSS
LDAAIAIGANEHPAILATQHLVDAAAFSVKSAEGALLPQLSASAGVSENYRNAIPDLSGSNGNSTSANIGATLTIPIYSG
GRTPALVRQSKESLGQARIQVDVSRDQVRQAVATAWSQYTAAQQSVSANRQVIDAAQLALNGVIEERNVGQRTTLDVLNA
QAAVITAKINQANSEHDVVVASYAILSAMGRLSVDRLALQVTKYKPEEHYNAVKDKWFGLRTPDGR

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=453, Percent_Identity=24.9448123620309, Blast_Score=91, Evalue=2e-19,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 48810; Mature: 48810

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDIPVPSVSKTLFAAVLVSATALSPLAASAETITGALAKAYQYNSTLNSSRAGVRVTDE
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
GVAIAKSTGRPTITGSASIDYTNTRLANGGGNSKLTSGSYGIQINQSLFDGFQTKNNVAA
CEEEEECCCCCEEECCCEECCCCCEEECCCCCCCCCCCCCCEEECHHHHCCHHCCCCHHH
AESQVKASVESLRNTEENTLFSAATAYMDVIRDRQIAVLTEQNLQFLTEQARAARSRFEV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCC
GEGTRTDVAQADASRASAVASLSAARAQALASAATYHQVVGDEPGKLKPAAPLAKLLPSS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC
LDAAIAIGANEHPAILATQHLVDAAAFSVKSAEGALLPQLSASAGVSENYRNAIPDLSGS
CCCEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
NGNSTSANIGATLTIPIYSGGRTPALVRQSKESLGQARIQVDVSRDQVRQAVATAWSQYT
CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHH
AAQQSVSANRQVIDAAQLALNGVIEERNVGQRTTLDVLNAQAAVITAKINQANSEHDVVV
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCEEH
ASYAILSAMGRLSVDRLALQVTKYKPEEHYNAVKDKWFGLRTPDGR
HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRDIPVPSVSKTLFAAVLVSATALSPLAASAETITGALAKAYQYNSTLNSSRAGVRVTDE
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC
GVAIAKSTGRPTITGSASIDYTNTRLANGGGNSKLTSGSYGIQINQSLFDGFQTKNNVAA
CEEEEECCCCCEEECCCEECCCCCEEECCCCCCCCCCCCCCEEECHHHHCCHHCCCCHHH
AESQVKASVESLRNTEENTLFSAATAYMDVIRDRQIAVLTEQNLQFLTEQARAARSRFEV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCC
GEGTRTDVAQADASRASAVASLSAARAQALASAATYHQVVGDEPGKLKPAAPLAKLLPSS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC
LDAAIAIGANEHPAILATQHLVDAAAFSVKSAEGALLPQLSASAGVSENYRNAIPDLSGS
CCCEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
NGNSTSANIGATLTIPIYSGGRTPALVRQSKESLGQARIQVDVSRDQVRQAVATAWSQYT
CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHH
AAQQSVSANRQVIDAAQLALNGVIEERNVGQRTTLDVLNAQAAVITAKINQANSEHDVVV
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCEEH
ASYAILSAMGRLSVDRLALQVTKYKPEEHYNAVKDKWFGLRTPDGR
HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]