| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471199
Identifier: 13471199
GI number: 13471199
Start: 927660
End: 928520
Strand: Reverse
Name: 13471199
Synonym: mll1106
Alternate gene names: NA
Gene position: 928520-927660 (Counterclockwise)
Preceding gene: 13471200
Following gene: 13471197
Centisome position: 13.2
GC content: 68.06
Gene sequence:
>861_bases GTGACGATGGCCACGGCAAGCAGCGCACAGCGCGAACCTTCCATGGAAGAGATACTGGCTTCCATCAGGAGGATCATCGA GGACAGCGACAACGGCCGCAAGCAGCCGGGTGAGCCCGAAGAGTTGCGGCAGGATCTGGAGCCTTCGCCGGACGAAGCTC CGGCCGCTGATGTGAATGCGTTTCGCGCGGAGTTGCATGCCGCCCCCGAGGTCAAGAAGCCGGTCGTGCTCGCGGAAGTC CAGGCGCCTTCGCCCGAGCCGGTGATCGCGCGGATGGATGCGCCGACGCGTGCCGATCCCGTGGCGGCCAAGCCGTCGAT GACGCTTGCCGAGGTCAGCGCCAGGATCGCCGCCGAGCAGGCGCCGCCCGCCACGGCCGGAGCGCCGATGGTCTCGCAGG CTGAGGCCCCGCAGGCCAGCGCGACAAGCGATGCGATCGTTGCCGATTGGCGGCGCGAGATCGCGTCCGTCGGAGAGCAG GCGAAAGCAATACCGGACAGGAGCATCCGCAAGCCGGTCGCTCAGCCCGAGGCGCCGGCGAGCGAGCCGGTGGCGGAGGC GGCATTCGAACGGCCTTCTTCAAGCGAAGCTCCGGCAGGCGCCGCTCAGGCGCGTGCGGCGGCAAGCGAAGCGCCTGCGG CGCGCCCTGCAATTCTTTCCGAACACACAGGCCGGCAGGTCGCCGCGGCCTTCGGCGAGCTGTCCGATGCCTTTGCCAGC CGCAGCAAGAAGACATTCGACGAGATGGCCGAGGAGATGCTGCGGCCGATGCTGCAGGACTGGCTGGACAATAATCTGCC GACGCTGGTCGAGCGCCTGGTGCGCGAGGAAATTGAACGTGTGGCGCGCGGGGCGCAATAA
Upstream 100 bases:
>100_bases TGGGGATTCTCGTGCGGCGATCCGTCGGTTACGCTGTCGCCATGATTCGAATCCGGCTTCTGCCGGAGCGGAAGACTAAC AGGTCACAAGGGCGGCGGAT
Downstream 100 bases:
>100_bases TCTTCTCCAACGATCGCGCGCGAAACGCCGCCCATGAGGCGGCGTTTTTGTCGATGAGGTCAGCCCGCGCTGATCGTGAA GCAGATGAGATTGCCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTMATASSAQREPSMEEILASIRRIIEDSDNGRKQPGEPEELRQDLEPSPDEAPAADVNAFRAELHAAPEVKKPVVLAEV QAPSPEPVIARMDAPTRADPVAAKPSMTLAEVSARIAAEQAPPATAGAPMVSQAEAPQASATSDAIVADWRREIASVGEQ AKAIPDRSIRKPVAQPEAPASEPVAEAAFERPSSSEAPAGAAQARAAASEAPAARPAILSEHTGRQVAAAFGELSDAFAS RSKKTFDEMAEEMLRPMLQDWLDNNLPTLVERLVREEIERVARGAQ
Sequences:
>Translated_286_residues MTMATASSAQREPSMEEILASIRRIIEDSDNGRKQPGEPEELRQDLEPSPDEAPAADVNAFRAELHAAPEVKKPVVLAEV QAPSPEPVIARMDAPTRADPVAAKPSMTLAEVSARIAAEQAPPATAGAPMVSQAEAPQASATSDAIVADWRREIASVGEQ AKAIPDRSIRKPVAQPEAPASEPVAEAAFERPSSSEAPAGAAQARAAASEAPAARPAILSEHTGRQVAAAFGELSDAFAS RSKKTFDEMAEEMLRPMLQDWLDNNLPTLVERLVREEIERVARGAQ >Mature_285_residues TMATASSAQREPSMEEILASIRRIIEDSDNGRKQPGEPEELRQDLEPSPDEAPAADVNAFRAELHAAPEVKKPVVLAEVQ APSPEPVIARMDAPTRADPVAAKPSMTLAEVSARIAAEQAPPATAGAPMVSQAEAPQASATSDAIVADWRREIASVGEQA KAIPDRSIRKPVAQPEAPASEPVAEAAFERPSSSEAPAGAAQARAAASEAPAARPAILSEHTGRQVAAAFGELSDAFASR SKKTFDEMAEEMLRPMLQDWLDNNLPTLVERLVREEIERVARGAQ
Specific function: Unknown
COG id: COG3827
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30342; Mature: 30211
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMATASSAQREPSMEEILASIRRIIEDSDNGRKQPGEPEELRQDLEPSPDEAPAADVNA CCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHH FRAELHAAPEVKKPVVLAEVQAPSPEPVIARMDAPTRADPVAAKPSMTLAEVSARIAAEQ HHHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC APPATAGAPMVSQAEAPQASATSDAIVADWRREIASVGEQAKAIPDRSIRKPVAQPEAPA CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC SEPVAEAAFERPSSSEAPAGAAQARAAASEAPAARPAILSEHTGRQVAAAFGELSDAFAS CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH RSKKTFDEMAEEMLRPMLQDWLDNNLPTLVERLVREEIERVARGAQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TMATASSAQREPSMEEILASIRRIIEDSDNGRKQPGEPEELRQDLEPSPDEAPAADVNA CCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHH FRAELHAAPEVKKPVVLAEVQAPSPEPVIARMDAPTRADPVAAKPSMTLAEVSARIAAEQ HHHHHHCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC APPATAGAPMVSQAEAPQASATSDAIVADWRREIASVGEQAKAIPDRSIRKPVAQPEAPA CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC SEPVAEAAFERPSSSEAPAGAAQARAAASEAPAARPAILSEHTGRQVAAAFGELSDAFAS CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH RSKKTFDEMAEEMLRPMLQDWLDNNLPTLVERLVREEIERVARGAQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA