| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470898
Identifier: 13470898
GI number: 13470898
Start: 567429
End: 568865
Strand: Reverse
Name: 13470898
Synonym: mll0717
Alternate gene names: NA
Gene position: 568865-567429 (Counterclockwise)
Preceding gene: 13470899
Following gene: 13470897
Centisome position: 8.08
GC content: 61.59
Gene sequence:
>1437_bases ATGGCGTCACAGGGGAGTATGCGATTGGCAGCGTTCGATGAAATGCTTCCGGAAGTTTCCGGATTGAGAAGACCGTATTC GGCTTATGATCGCTGGCTGAAGGAGCAGGATCCAGCCAGACTTACCGAGAAGATGCAGGACGCCGAACGCGTCTTCCGCA AGACCGGCATCACCTTCGCCGTCTATGGCGAGCAGGAAGCTTCCGAGCGGCTGATCCCCTTCGACATCGTCCCGCGCATC ATTTCAGGCAATGAGTGGCGGCGCCTGACGCAAGGCATCGAGCAGCGCGTGCAGGCGCTGAACGCCTTCCTCGACGACAT CTACCATCGCCAGGAGATCCTGCGCGCCGGCCGCGTTCCCAGGGACCTGATCGCCAAGAACGAAGCTTTCCTGCCGGAGA TGATCGGGGTGCGGCCGCCGGCCGGTGTCTACACCCATATCATCGGCGTCGATATCGTGCGCATCAGCGAGGACGAGTTC TACGTATTGGAGGACAATGCGCGCACCCCGTCCGGTGTCTCCTACATGCTGGAGAACCGCGAAACGATGATGCAGCTGTT CCCCGAGCTGTTCCAGAAGATCAAGGTGCGGCCGGTGGAGAACTACCCGCAGCTGCTGCGTCAATCGCTGGCTGCGGTTC GGCCGCAAAGCACCAAGGGCGCGCCGACCATCGCCGTGCTGACCCCCGGCAGCTTCAATTCCGCCTATTTCGAACACGCC TTCCTTGCCGACCAGATGGGCGTGCAACTGGTCGAGGGCCAGGATCTGCGCGTTGTCGACGGCCATGTGGCGATGCGCAC GACCGAAGGCTACAAGCAGATCGACGTGCTCTACCGCCGCGTCGACGATTCCTTCCTCGACCCGCTGACCTTCCGGCCGG ATTCGGCCCTCGGCATACCCGGCATCATGGATGTCTATCGCGCCGGAAACATCACCATCGCCAATGCGCCGGGAACCGGC ATCGCCGACGACAAGGCGATCTATTCCTACATGCCCGAGATTGTGGAATTCTACACCGGCCGCAAGGCGATCCTCGGCAA CATCCCGACCTGGCGCTGTTCGGAGCCGGACAGCCTGAAATATGTGCTCGAGCACATCCATGAACTGGTGATCAAGGAAG TGCACGGCTCCGGCGGCTACGGCATGCTGGTCGGACCGGCGGCGACCAAGAAAGAGTGCGAAGCCTTCGCCAAGAAACTG GCGGCGAAGCCTTCGAACTATATCGCCCAACCGACACTGGCGCTGTCGACTTGCCCGATCCTGACCGACAAGGGACTGGC GCCGCGCCACGTCGACCTCAGGCCCTACGTGCTGGTTTCCGACCGCATCCAGATCGTGCCCGGCGGCCTGACGCGCGTGG CGTTGAAGGAAGGCTCTCTGGTCGTGAACTCATCGCAGGGTGGCGGAACGAAAGATACTTGGGTGTTGGATGATTGA
Upstream 100 bases:
>100_bases GTATTTCGACTGCCTCAATTTTAGGCAGCCGCAACATACTGATCGTCCGCATCTCCCAAATCACCGATTGCGCTTGATTT TCTTCGGCGACGCCAGTGAA
Downstream 100 bases:
>100_bases GACGAGCAGGGGGACGCAGCAACCATGAGACGTATTCTTCCCTATTCGCCACTCGCTATTCGCTATTCGCCCGACACCGG AGCAAGCTGACATGCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFAVYGEQEASERLIPFDIVPRI ISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVPRDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEF YVLEDNARTPSGVSYMLENRETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHA FLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIPGIMDVYRAGNITIANAPGTG IADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLKYVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKL AAKPSNYIAQPTLALSTCPILTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD
Sequences:
>Translated_478_residues MASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFAVYGEQEASERLIPFDIVPRI ISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVPRDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEF YVLEDNARTPSGVSYMLENRETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHA FLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIPGIMDVYRAGNITIANAPGTG IADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLKYVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKL AAKPSNYIAQPTLALSTCPILTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD >Mature_477_residues ASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFAVYGEQEASERLIPFDIVPRII SGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVPRDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEFY VLEDNARTPSGVSYMLENRETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHAF LADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIPGIMDVYRAGNITIANAPGTGI ADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLKYVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKLA AKPSNYIAQPTLALSTCPILTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 53331; Mature: 53200
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFA CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE VYGEQEASERLIPFDIVPRIISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVP EECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEFYVLEDNARTPSGVSYMLENR HHHHHCCCCCCHHHHCCCCCCCHHHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHH ETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHH FLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIP HHHHHHCCEEECCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GIMDVYRAGNITIANAPGTGIADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLK HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHH YVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKLAAKPSNYIAQPTLALSTCPI HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEECCC LTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD CCCCCCCCCCCCCCCEEEECCCEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC >Mature Secondary Structure ASQGSMRLAAFDEMLPEVSGLRRPYSAYDRWLKEQDPARLTEKMQDAERVFRKTGITFA CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEE VYGEQEASERLIPFDIVPRIISGNEWRRLTQGIEQRVQALNAFLDDIYHRQEILRAGRVP EECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RDLIAKNEAFLPEMIGVRPPAGVYTHIIGVDIVRISEDEFYVLEDNARTPSGVSYMLENR HHHHHCCCCCCHHHHCCCCCCCHHHHEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHH ETMMQLFPELFQKIKVRPVENYPQLLRQSLAAVRPQSTKGAPTIAVLTPGSFNSAYFEHA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHH FLADQMGVQLVEGQDLRVVDGHVAMRTTEGYKQIDVLYRRVDDSFLDPLTFRPDSALGIP HHHHHHCCEEECCCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GIMDVYRAGNITIANAPGTGIADDKAIYSYMPEIVEFYTGRKAILGNIPTWRCSEPDSLK HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCHHHH YVLEHIHELVIKEVHGSGGYGMLVGPAATKKECEAFAKKLAAKPSNYIAQPTLALSTCPI HHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHEECCC LTDKGLAPRHVDLRPYVLVSDRIQIVPGGLTRVALKEGSLVVNSSQGGGTKDTWVLDD CCCCCCCCCCCCCCCEEEECCCEEEECCCCEEEEEECCCEEEECCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]